Vulpes lagopus (Arctic fox): 121477892
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Entry
121477892 CDS
T07435
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121477892 (CHD6)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121477892 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
121477892
NCBI-ProteinID:
XP_041588356
LinkDB
All DBs
Position
18:18227745..18404262
Genome browser
AA seq
2716 aa
AA seq
DB search
MIMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFERSTDQEEKIEDVASHCLSQKD
LYAAEEEAETLFPRKMTSHNGMEDSGGGGTGVKKKRKKKDPGEQDGAAKGSKDREPKPKR
KREPREPKEPRKAKEPKRAKEPKEPKQKDGAKKARKPREASGTKEAKEKRSSADTAARTK
SKKASKEQGPTPVERKKKGKRKSETTVESLELDQGLPNSSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAAEKAFEGTPAREL
EVPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGTSDIPERGNMDKEDNTEDKLDGLQKQMESSSDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVSSALTARLRRLVTVYQRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMD
LINKEAQKRWTRREQADFYRAVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFY
SFVAMCRNVCRLPTWKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLVGTAKHGLNRTDYYVMTDPQLSFLDAYRNYAQHKR
TDAQAPESLCCLYQTNSKLYESLTYSQMNRTSEPLENEPENLVKIEGRDDHPPPPGGNLS
DMSCENFLSKVQDVISITHDESLLPESLESMMYGKKALSQEPGSFQESPTTIEPRKDALA
SSASEEGKCQPGGHEAEIPTGPSFMDSLEAGVAQMNIKNGKHLLLSLSREGELCSETGQR
PESIGQLEAKCLASPSLDQGNESGFVDMYNLSVCDSRRSLSSDQQLIDLLEDKSLESKLV
LSQTHSDEEEEEEENEEENVGVATDLRERPEVLHLAEPTADTLREKSRSFHVEETKRGGL
EAMNQNPGSQGAFPQAACQCHCKHADRWMRGLENEGFEVEKPKGYHPDMYKSKTNSVTVE
GEPTATPAEPPQGKHELLKEPWKDSAEGKKGFHVYPEASELKSEDMDFESKDDFDRDGNG
HAQDYPGKYSEEESKSSTSGIAGDLGDDLQEARAPTIAQLLQEKTLFSFSEWPKDRVIIN
RLDNICHVVLKGKWPSSQQYEPSGTLPTPVLTGSAGSRSSLSEPEASEHSFSSSAALVAQ
IQKESFLAPVFTKDEQKHRRPYEFEVERDAKARSLEQFSATHGHPPIVLNGWHGESAIDL
SCTSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRR
DDAATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQAPPSASHPEGPVPAAPAP
EPAPAASSQAEKAIPSKSLLDWLRQQADYSLEVPGFGANFSDKPKQRRPRCKEPGKLDVN
SLSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDGGPRRRGRRPRSELLKAPAIVAD
SPSGMGPLFMNGLIAGMDLVGLQNMRNMPGIPLTGLVGFPAGFAAMPTGEEVKSTLSMLP
MMLPGMAAVPQMFGVGGLLNTPMAAACTSTAPAPLPSTTKSGTPATEKTVEDKPSSHDVK
TDTLAEDKPGPGPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAM
QQARHSEVIGLESQKRKKKKTKGDSLNPNPEPAPGSEKEPGSDQNCPESRAPVPPDREHA
AQAREGGLKDSNSDTN
NT seq
8151 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacaaaagaaagagaagcagttgtcaaatttaaaagttctgaatcac
tccccaatgtctgatgcctctgtcaattttgactacaaatccccctcccccttcgagcgc
agcactgatcaggaggagaaaattgaagatgttgccagtcactgtctgtctcagaaggac
ctgtatgctgctgaagaggaagctgagactcttttccctaggaagatgacatcccataat
gggatggaggacagtggagggggaggcactggggtgaagaagaaaaggaagaaaaaggat
ccgggagagcaagatggtgcagcaaagggaagcaaggacagggagcccaagccaaagagg
aagcgagaacctagagagccaaaggaaccccggaaggccaaggagcccaagagggccaag
gagcccaaggagcccaagcagaaggatggagccaagaaagcacggaagccccgggaggcc
tcgggcaccaaggaggccaaagagaagagaagcagcgctgacactgcagccaggacaaag
tccaagaaggccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaag
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaactcatcc
ctgcggagtcctgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caggtgaagcgcagaaaatacaacgaggatctggacttcaaagtggtggatgatgatggg
gaaacaatcgctgttcttggagctggccgaacatctgccctctcggcgtctaccctggct
tggcaggcagaggagcctccagaagatgatgcaaacatcattgagaagatcctggcatct
aagaccgtccaggaggttcacccaggagagcccccatttgacttggagctattctacgtt
aagtatagaaatttttcctacttacattgtaaatgggccacaatggaagagctggaaaag
gatcctcgcatcgcccagaagatcaagcgatttaggaataagcaagcccagatgaagcac
atttttactgagcctgatgaagacttgttcaacccagactacgtagaagttgatcgcgtc
ctggaggtggcccacaccaaagatgcagaaacaggagaggaagtgacacattacttggtg
aagtggtgctctctgccttatgaagaaagcacatgggagctggaggaagatgtagatcct
gcaaaagttaaagaatttgagtctcttcaagttctccctgaaattaagcatgtggagcgg
cctgcttcagattcctggcagaaactggagaagtcgcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aattgtattttggctgatgagatgggccttgggaaaaccatccagtctatcacattcctc
tcagagatattcctccggggaatccacggcccattcctcatcatcgccccactctccacc
atcacaaactgggagcgggagttcaggacatggacagagatgaatgccattgtgtaccat
ggcagccagatcagcaggcagatgatccagcagtatgagatggtatacagagatgcacag
ggaaaccccctttcaggagtcttcaagttccatgttgtcatcacaacgtttgagatgatc
ctggcagactgcccggagctgaaaaagattcactggagctgtgtgatcattgatgaagcc
cacagattgaagaacaggaactgcaaacttctggagggtctaaagctcatggccctggaa
cacaaagtgctgctcactgggacacccttgcagaactctgtggaagagctcttcagcttg
ctgaattttctggagccatcacagtttccttcagagactgctttcttggaggaatttgga
gatctgaaaacagaggaacaggtgaagaaactgcagtctatcctaaaacccatgatgctt
cggcggctgaaagatgatgtggaaaagaaccttgctcccaaacaagagacgatcattgaa
gtagagctgaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctgaccaagggtgcaaatcagcacaacatgcccaatctcatcaacaccatgatggag
ctgagaaagtgctgtaaccatccgtatttgatcaatggggcagaggagaaaattctggaa
gatttccgaaaaactcacagtcctgatgcccctgactttcagctgcaggccatgattcaa
gcagcagggaaactggtgctgattgataaactgctccctaagctgattgcaggtggtcac
aaagtactcatcttctcccagatggtgcgatgtctcgatatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccaga
gcgggaggcctgggcatcaatctcacagccgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcatcggataggccagagtaag
gccgtgaaggtatatcgtcttattactcggaactcctatgagcgggaaatgtttgacaaa
gccagcctaaagctgggtctggacaaggctgttcttcaggacataaaccgaaagggcagc
accaatggagtacaacaactctcaaagatggaggtagaagacttgctccggaaaggtgct
tatggagccttaatggatgaggaagatgaaggctccaagttctgtgaagaagacatagac
cagattctccagagaagaactcacaccatcaccatccagtccgaagggaaagggtctact
tttgccaaggctagctttgtggcttcaggaaacaggacagatatttccttagatgaccca
aacttttggcagaaatgggctaaaatagctgaattggacactgaagcaaagaatgaaaag
gagagcttagtgattgaccggcctcgagtgaggaagcagaccaaacactacaattccttt
gaggaggatgagctcatggagttctcagagctagatagtgactcggatgaaaggcccacg
aggtctagacgcctcaatgacaaaaccaggcgctacctccgagctgagtgcttccgggtg
gagaagaacctgctcatctttggctggggccggtggaaggacatcctgactcatgggcga
ttcaagtggcatctgaatgagaaggacatggagatgatttgccgggccctgctggtatac
tgtgtcaagcattacaagggggacgagaagatcaagagtttcatttgggaattgatcaca
cctaccaaagatgggcaggcccagaccctccagaaccactcagggttgtcagctccagtc
cccagagggaggaagggaaagaagaccaagaaccagctgctgctcccagagttaaagaat
gcagattggctggccacctgcaaccccgaggtggtcttacatgatgacggctataagaaa
cacctcaagcagcactgcaacaaggtacttttgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaggcagctgagaaagcgtttgaaggaacccctgccagggaacta
gaagtgcctctgcctgacattgactacgtggagatcccagtggattggtgggatgctgag
gctgataaatcccttctgataggcgtgttcaaacatgggtatgagaggtacaatgccatg
cgagctgacccagcactttgcttcctggagaaagtcgggatgccagatgagaagtccctt
tctgcagaacaaggtgttacggatgggacctcagacattcctgaaagaggcaatatggat
aaagaagacaacaccgaagacaagttagatggcctacagaagcaaatggagagctccagt
gatggaggtgatggcatttttggcgaaaagaaagatgacagccgggcagcccaggatggc
tccgacccagacaaatcaccctggccagtttcatctgctctcacggctcgtctcaggcgt
ctggtcaccgtgtaccagcgctgtaaccgcaaggaactctgccgaccagaaatcctagga
ccaggtaaccaaggatactgggtccaagaagagatgttcaggagaacctcagaaatggat
ctcatcaacaaggaagctcaaaagaggtggactagaagagagcaagcagacttctacaga
gcagtgtcctcctttggggttgtttatgatcaagaaaagaaaacttttgactggacacag
ttccgcatcatttcccgtttagacaagaaatcggatgagagcctggagcactacttttat
agttttgtggccatgtgccggaatgtctgtcgtctgcccacatggaaggatggcggtccc
ccagatccaagcatctatgtggaacccatcactgaggaacgggctgcgagaaccctttac
cgtatcgaactgctgcgaaaggtccgagagcaggtgctgaggtgcccccagctgcacgag
cgcctccagctctgcaggcccagcctctacctccctgtctggtgggagtgtgggaagcat
gaccgggacctgctcgttggcactgccaaacatgggctaaaccgcaccgactattatgtc
atgactgacccccagctgtccttcctggacgcttatagaaactacgcccagcataagaga
acggacgcccaggcaccagaaagtctctgttgcctttaccagaccaactccaaactgtat
gaatctctcacatactctcagatgaacaggacttcagagccccttgaaaatgagccggag
aatctagtgaaaatagaagggagagatgatcatccccctccacctgggggcaatttatct
gatatgtcttgtgaaaactttctttctaaagttcaagatgtcatttccatcacccacgac
gaaagtctgctgcctgagtccttggaaagcatgatgtatggtaagaaggctcttagccag
gagccaggctctttccaggaaagccccactactatagaacccagaaaggatgcgctggcc
agctcagcaagcgaagaagggaagtgccagcctggtggccacgaggcagagatacccaca
ggcccctcttttatggatagcttagaagcaggagtagctcagatgaacatcaaaaatgga
aaacatctgttgctctctctttcaagggaaggggagctctgcagtgagacagggcagagg
cctgaaagcattgggcaactagaagccaaatgcttagcttccccttccttggatcaagga
aatgaaagtgggtttgtagatatgtacaatcttagtgtctgtgactccagaagaagcctg
tcctcagatcagcaattaattgatttattagaagacaaaagtttagaaagcaaattggtt
ttgagtcagacccacagcgatgaggaggaggaagaggaggaaaatgaggaggagaatgta
ggcgtggccacagacctgagggaaaggccggaggttttgcatctggctgagcccactgca
gataccctaagggaaaagagccgaagtttccatgtggaggaaaccaagagaggaggcctg
gaagccatgaatcagaatcctggatcacagggggcttttcctcaagcagcctgtcagtgt
cactgcaagcacgcagaccggtggatgcgaggcctcgagaacgaggggtttgaagtggag
aaacccaagggttatcacccagatatgtacaaaagtaaaaccaacagtgtcacagtggag
ggcgagcccactgctactccagcagaaccccctcaggggaaacatgagctgttaaaagag
ccttggaaggacagtgcagaaggcaaaaaaggtttccatgtgtatccagaagccagtgag
ctcaagtccgaagacatggattttgagagtaaagatgattttgacagagatgggaacggc
catgctcaagattacccagggaaatactctgaagaggagagcaaaagctcaacatcaggc
attgcaggagatcttggggatgacctgcaggaggcgcgggctcccaccattgctcagctg
ctccaggagaagaccctcttttccttctctgagtggccaaaggatcgcgtgataatcaac
cgcctggataatatctgccacgtggtgttaaaggggaaatggccttccagccagcaatat
gagccttcaggcaccctgcccaccccggtgttaacgggcagtgctggttctcggagcagc
ctctcagagccagaagcatcagaacacagcttcagcagtagtgcagcgttggtggcccag
atccagaaggagagcttcctggctccagtattcacaaaggatgaacaaaagcacagacgt
ccctatgagtttgaggtggagagggatgcaaaggcccggagcctagaacagttctctgcc
actcacgggcacccccccatcgtcctcaatggctggcatggggaatctgcaatagatctc
tcctgcacatcagaggggtctccaggagccacgtctcctttcccagtgagcgccagcacc
cctaagattggggctattggttcacttcaaggagcactcggcatggacttgtcaggaatt
ctacaagctggcctgatccatccagtgacgggacagatcgtcaatggaagcctcagaaga
gatgacgctgccacaaggagacggagagggagacggaaacatgtcgaaggagggatggac
ctcatctttttaaaggagcagacacttcaggctggaatcttggaagtccatgaagatcca
gggcaggcccccccaagcgcctcccaccctgaagggccggtgcctgctgctccagccccc
gagccagccccagcagccagcagccaggccgagaaagccattcccagcaagagtctgctt
gactggctaaggcagcaggctgactactccttagaggttcctggctttggagcaaatttt
tcagacaaaccaaagcagaggaggccacgctgtaaagaacctggaaaattagatgtcaac
tctctgagtggggaagagagggttcctgctgtccccaaggagccaggactaagggggttt
ctcccagaaaacaagttcaatcacaccctggctgagcctgttcttcgagatgggggcccc
cgccggagggggaggcggcctcggagcgagctcctgaaggctcctgccatcgtggcagac
tctccctcggggatggggccgctgttcatgaacgggctgattgctgggatggacctggta
ggactccagaacatgagaaatatgccaggcatccccctcacgggtctggtggggttcccg
gctggctttgccgcgatgcccacgggcgaagaggtcaaaagcacgttgagcatgctgccc
atgatgctgccggggatggccgcggtgccccagatgttcggtgtcggcggactcctcaac
acacccatggcagctgcctgcacttccaccgctccagcgcctctaccaagcacaacaaaa
agtggtacacctgcgaccgaaaagactgtagaagacaagccaagtagccatgacgtaaaa
acggacacgttagctgaagacaagcctggtcctggtccattttctgatcagtccgaacct
gcaataactaccagtagtcctgtggcttttaacccatttctcatcccaggagtgtctcct
ggactcatttacccatccatgtttctctcccctggcatgggcatggctctgcctgcaatg
cagcaggccagacactctgaagtaataggtctggagagccagaaaaggaagaagaagaaa
acaaaaggggacagcctgaaccccaatccagagcctgctcccgggtccgaaaaggagcca
ggcagcgatcagaactgccctgaatccagggcacccgtgccccccgatagagaacatgcg
gcacaggccagggaagggggcctcaaagactctaacagtgacaccaattag
DBGET
integrated database retrieval system
