Vulpes lagopus (Arctic fox): 121477916
Help
Entry
121477916 CDS
T07435
Symbol
SOGA1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121477916 (SOGA1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121477916 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
121477916
NCBI-ProteinID:
XP_041588405
LinkDB
All DBs
Position
18:22197579..22271802
Genome browser
AA seq
1657 aa
AA seq
DB search
MEAPAGEPPARGCGPPPAPGPERKKSHRAPSPARPKDVAGWSLAKGRRGPGPGAAAACSA
ASSARPDKKGRAAAPGARSAGPRVAGVRSGVRAKGRPRPGPGPRPPPPPPSLTDSSSEVS
DCASEEARLLGLELALSSDAESAAGGPAGARPGQPPQPAPPAQQPPRPPASPEEPSGAAS
SVGSSRLPLSASLAFSDLTEEMLDCGPGGFVRELEELRSENDYLKDEIEELRAEMLEMRD
VYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRGLEQDVK
VSKDISVRLHKELETVEKKRARLEEENEELRQRLIETELAKQVLQTELERPREHSLKKRG
TRSLGKTDKKPSVQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYRSLYG
DLDSALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKDH
GGGCGGAEARLAFSTLGGSECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLLTEL
AKYRSEHELDVTLSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSNLQRC
DLASCQSTRPMLETDAEAGDSAQCVPAALSEAHGPHAARLCRAREAEALPGLREQAALVS
KAIDVLVADANGFSAGLRLYLDNECADFRLHEAPDNSEGPRDTKLIHAILMRLSMLQQEL
NAFTRKTDSVLGSSAKEQPEPFSTLPALGSQGPSKEILLAKDLGSDFQPPDFRDLPEWEP
RIREPFRGGDLDSKPDPSRNFRPYRAEDNDSYASEIKELQLVLAEAHDSLRGLQEQLSQE
RQLRKEEADNFNQKMGQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNMLVQESQQ
FKHNFLLLFMKLRWFLKRWRQGKILPSEGDDFLEVNSMKELYLLMEEEELNAQHSDNKTC
TGDSWTQNTPNEYIKTLADMKVTLKELCWLLRDERRGLTELQQQFAKAKATWETERAELK
SHTAQVELKTGKGAGERAGPDWKAALQREREEQQHLLAESYSAVMELTRQLQISERNWSQ
EKLQLVERLQGEKQQVEQQVKELQNRLSQLQKAAEPWILKHSDLEKQDNSWKETRNEKIL
DKEAVSEAELGGTALKRTKSVSSMSEFESLLDCSPYLAGEAARGKKLPNNPAFAFVGTQP
VDPEKDAQEQPSLPPRDCNRLGTLGCQEPAGRQMQRSYTAPDKTGIRVYYSPPVARRLGV
PVVHDREGKIIIEPGFLFTTAKPKESTEADGLAESSYSRWLCNFSRQRLDAGSGGSPSAP
GPSFPAALHDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKSTSSQTVGLASVGTQTIR
TVSVGLQTDPPRSSLHSKSWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKL
QRRSVSKLDSTKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSVVEHSGS
TESVWKLGMSEARAKPEPPKYGIVQEFFRNVCGRAPSPTSAAGEESTKKPEPLSPASYHQ
PEGMARILNKKAAKSGGSEEARLSVLPQVGKDGVPRDGDGATALPNEDAVCDCSTQSLTS
CFARSSRSAIRHSPSKCRLHPSESSWGGEERAAPPSE
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccggcgggggagcccccggcccggggctgcggccccccgcccgcgcccggc
ccggagaggaagaagagccaccgcgcgccgtcgccggcccggcccaaggacgtggccggc
tggtctctggccaagggccgccgcggcccaggcccgggcgccgccgccgcctgcagcgcc
gcgtcctccgcgcggccagacaagaaggggcgcgcagcggcgcccggggcgcggagcgcg
gggccgcgggtggccggggtccgctccggggtgcgcgccaagggccgcccgcgccccggc
cccgggccgcgcccgccgcccccgccgcccagcctcaccgacagcagctcggaggtgtcg
gactgcgcgtcggaggaggcgcgcctgctgggcctggagctggcgctgagcagcgacgcc
gagtcggcggccgggggcccggcgggggctcgccccgggcagccgccccagcccgcgccg
cccgcgcagcagcccccgcggccgcccgcctccccggaggagccgtcgggggccgcgtcg
tcggtgggcagcagccgcctgcccctcagcgcctcgctagccttctccgacctcaccgag
gagatgctggactgcgggcccggcggcttcgtgcgggagctggaggagctgcgctcggag
aacgactatctcaaggacgagatcgaggagctgcgggctgagatgctggagatgcgggac
gtctacatggaggaggatgtgtaccagttgcaggagctgcggcagcagctagaccaggcc
agcaagacatgccgcatcctgcagtaccggctgcgcaaggctgagcgccgcagcctccgc
gctgcgcagactggccaggtggatggggagctcatccgtgggctggagcaggatgtcaag
gtctctaaggacatctctgtgcggctgcataaggagctggagacagtggagaagaaacgg
gcacggctggaggaggagaacgaggagcttcggcagcggcttatcgagaccgagctggcc
aagcaggtgctgcagacggagttggaacggccgagagagcattccttgaagaaaagagga
acccgctccctggggaagacagacaagaagccttcggtgcaggaggacagtgcagacctg
aagtgccagctgcactttgcaaaggaggagtcagccctcatgtgcaagaagctcaccaag
ctcgccaaggagaacgacagcatgaaagaggagctgctcaagtaccgctccctctatggt
gacctggacagcgctctgtccgccgaggagctggccgatgcgcctcactctcgggagacc
gagctgaaggtacatctgaagctggtggaggaggaagctaacctgttgagccgccgcatt
gtggagctggaggtagaaaaccgaggcctgcgggcagagatggacgatatgaaggatcac
ggcggtggctgcggaggtgcggaggctcgcctggccttctctacgctgggtggcagtgag
tgcggggagagcctggcggagctgcggcgacacttgcagtttgtggaggaggaggctgag
ctgctccgacgctcctcggcagagctggaggaccagaacaagctgctgctgaccgagctg
gccaagtaccgctcagagcacgagctggatgtgacactgtcggaagacagctgctctgtg
ctcagtgagccctcgcaggaggagctggcggctgccaagctgcagattggggagctcagt
ggtaaggtcaagaagctgcagtatgagaaccgggtgctgctgtccaacctccagcgctgt
gatcttgcctcctgccagagcacacggccgatgctggagacggacgccgaggctggggac
tctgcccagtgtgtgcccgctgctctcagcgaggcccacggcccccacgctgcccggctc
tgcagagccagggaggccgaagcgctgcctgggctgagggagcaggccgccctggtgagc
aaggccatcgatgtcctggtggccgatgccaacggcttctcggccggcctccgcctgtat
ctggacaatgagtgtgctgactttcggctacatgaggcccctgacaacagcgagggtccc
agggacaccaagctcatccatgccatcctgatgcggctgagcatgctccagcaggagctc
aatgccttcacacggaagacggacagcgtcctcgggagctctgccaaggagcaaccggag
cccttctcaacactgcctgccttgggctctcaggggccctccaaggagattcttttggcc
aaagaccttggctcagacttccagccgcctgacttcagggatctgccggaatgggaaccc
aggatacgagagcccttccgtggtggtgacttggactccaagcctgaccccagccggaac
ttcaggccttacagagctgaagacaatgattcctatgcctctgagatcaaggagctgcag
ctcgtgctggcagaggctcatgacagcctccggggcctgcaagagcagctctcccaggag
cggcagctacgcaaggaggaggccgacaacttcaaccagaagatgggccagctgaaggag
gaccagcagagggcactcctgaggcgagagtttgagctgcagagtctgagcctccagcgg
aggctggagcagaaattctggagccaggagaagaacatgctggtgcaggagtcccaacag
ttcaaacacaacttcctgctgcttttcatgaagctcaggtggttcctcaagcgttggcgg
cagggcaagattttgcccagcgagggggatgacttccttgaggtaaatagcatgaaggag
ctgtacctgctaatggaggaagaagaattaaatgcccagcattcagataacaagacctgc
acgggggacagctggacccaaaatacgcccaatgagtatatcaagacactggctgacatg
aaggtgacgctgaaggagctgtgttggctgcttcgggatgagcgccgtggtctgactgag
ctccagcagcagtttgccaaggccaaggccacctgggagacagaacgggcagagttgaag
agccatactgcccaggtggagctaaagactggcaaaggggctggggagcgggcagggccc
gactggaaggcagccctacagagggagcgtgaggagcagcagcacctgctggctgagtcc
tacagtgctgtcatggagctgacacggcagctacagatcagcgagcgcaactggagccag
gaaaagctgcagctggtggagcggcttcagggtgagaagcagcaggtggagcagcaggtg
aaggagctgcagaaccgtctgagccagctgcagaaggctgctgaaccctggatcctgaag
cactcagacctggagaaacaggacaacagttggaaagagacacggaatgagaagatcctt
gacaaggaggcagtttctgaagctgaacttgggggcaccgccttaaaaaggaccaaatct
gtttcctccatgtctgagtttgaaagtttgctggactgttccccctaccttgctggtgaa
gctgcccggggtaagaagctgcccaacaaccctgcctttgcctttgtgggcacccagccg
gtagacccagagaaagatgcccaggagcagcccagcctcccaccgcgggactgcaaccgc
ttgggcaccctgggctgccaggagccggcagggaggcagatgcagcgtagctacacagct
cccgacaagacaggcatccgcgtgtactacagccccccggtggcccggcgcctgggcgtc
cccgtggtccatgaccgggagggcaagatcatcatcgagcccggcttcctctttaccaca
gccaaacccaaggagtcgaccgaggccgacgggctggccgagagctcctacagccggtgg
ctctgcaacttctcacgacagcgcttggatgcaggctcagggggcagcccctctgcacca
gggcccagcttcccagcggccctgcacgactttgagatgtcgggcaacatgagtgacgac
atgaaggagataactaactgtgtacgccaggccatgcgctcgggctcactggagaggaag
gtgaagagcacatctagccagacggtgggcctggccagtgtgggcacgcagaccatccgc
acagtcagcgtgggcctgcagaccgacccaccccgcagcagcctccacagtaagagctgg
tcaccccgcagctcctcacttgtgtccgtgcgcagcaagcagatctcctcctccctggac
aaggtgcactcacgtattgagcggccttgctgctcacccaagtatggctcgccaaagctc
cagaggcggtctgtgtccaagctggacagcaccaaggaccgcagcctatggaacctgcac
cagggcaagcagaatggctcggcctgggcccgctccaccactacaagggatagccccgtc
ctgaggaacatcaacgatgggctatccagcctcttcagtgtggtggagcactcggggagc
acagagtctgtctggaaactgggcatgtctgaggctcgggccaagcccgagcctccaaaa
tacggcattgtgcaggagttcttccgcaatgtgtgtggccgggcaccaagccccacctca
gcagcaggggaggagagcaccaagaagccggaacccctgtccccagccagctaccatcag
ccagagggtatggccaggatcctgaacaagaaggcagccaagtcaggtggcagtgaggag
gccagactctcagtgctcccccaggtggggaaggatggtgtcccccgggatggagatgga
gcaacagcccttcccaacgaggatgctgtctgtgactgtagcacccagtctctcacctcc
tgctttgcccggtcgtcccgctctgccatccgccactctccttccaaatgcaggctgcac
ccttcggagtccagctggggtggggaggagagggcagctccccccagcgagtga
DBGET
integrated database retrieval system