Vulpes lagopus (Arctic fox): 121477950
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Entry
121477950 CDS
T07435
Symbol
CRNKL1
Name
(RefSeq) crooked neck-like protein 1 isoform X1
KO
K12869
crooked neck
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121477950 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vlg03041
]
121477950 (CRNKL1)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121477950 (CRNKL1)
Spliceosome [BR:
vlg03041
]
Complex B
Other components
Prp19-related factors
121477950 (CRNKL1)
Complex C
121477950 (CRNKL1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121477950 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
121477950
NCBI-ProteinID:
XP_041588493
LinkDB
All DBs
Position
18:complement(44457066..44472761)
Genome browser
AA seq
742 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQSNFPGCPMEPLDSFEEPQRHCG
RRVLGGAAKEMLKMGLTSSTPSTVREAQFHLLSLARSIYERALDVDYRNITLWLKYAEME
MKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQPEEQAW
HSYINFELRYKEVDRARTIYERFVLVHPDVKNWIKYARFEEKHGYFAHARKVYERAVEFF
GDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRR
GIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANVPPIQE
KRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQ
KNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKF
AELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQRT
QHVKVWISFAQFELSSRKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEDEFG
TVSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKLWK
KQQQEKEAAEQDPDKDIDETES
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccacggctgccgggaagcagaggattcccaaagtggccaaggtgaaaaac
aaagccccagctgaggtacagataactgctgagcaactcttaagagaagctaaagaaaga
gaacttgagcttcttcctcctccacctcaacagaagatcacagatgaagaagaattaaat
gattacaaactaagaaaaaggaagacttttgaagataacataagaaaaaacaggaccgtg
attagtaactggataaaatacgcacaatgggaagagagtctaaaggagattcaaagtaat
tttccaggttgtcccatggaacctttggactcctttgaggaacctcagaggcactgtggt
aggcgagtcctgggaggagcagcgaaggagatgctaaaaatgggtctcacctccagcaca
ccctctacagtcagagaagcacagtttcatctgctttctttggctcgatccatatacgaa
cgtgctttagatgtagactaccggaatattacactctggctaaaatatgcagaaatggaa
atgaagaatcgccaggtcaaccatgcccgaaatatctgggaccgagccataacaactctt
cctcgcgtcaaccagttctggtacaagtacacatacatggaggagatgttgggaaacatt
gctggcgcccggcaggtgtttgagcgctggatggaatggcagcctgaggagcaagcctgg
cattcctacatcaactttgagctgcgatacaaagaggtggatcgggcccgcaccatttat
gaacgatttgttctcgtgcaccctgatgttaagaactggatcaagtatgctcgctttgaa
gaaaaacatggttattttgcccatgcacggaaagtgtatgagagagctgttgaattcttt
ggagatgaacatatggatgaacacctctatgttgcctttgccaaatttgaagaaaatcag
aaagaatttgaaagggtacgagtgatctacaagtatgccctggatagaatttcaaagcag
gaggcccaagaactctttaaaaactataccatctttgagaagaagtttggtgataggcgg
ggtattgaagacatcattgtgagcaaacgaagattccagtatgaggaagaagtgaaggct
aatccacacaattatgatgcatggtttgattacttgcgcttggtggaaagtgatgcagaa
gcagaaaccgttcgagaagtctatgaaagagccatcgccaatgtgccacccattcaagag
aagcggcactggaagcgttacatctatctgtgggtcaactatgcactctatgaagaattg
gaggccaaggatcccgagaggacaagacaggtgtatcaagcttctttggaattaattcct
cataaaaagttcacgtttgccaagatgtggttactgtacgcacaatttgaaataagacag
aaaaatttaccgtttgccagaagagctttgggaacttccataggcaaatgtccaaagaac
aagttatttaaaggttacatagaactggagctgcagcttcgagaattcgacagatgccgg
aagctttatgaaaagttcttggaatttggacctgagaactgtacctcttggattaaattt
gcagaattagaaacgatccttggtgatattgagagagcccgggcaatctacgagttagcc
atcagtcagccacgcttagacatgccggaggtgctttggaaatcatacattgattttgaa
attgagcaggaagaaactgagagaacacgaaatctttaccgaagattgcttcagcggaca
cagcatgtcaaggtatggatcagctttgcacagtttgagctatcatcaaggaaggaagga
agtttggctaaatgcagacagatttatgaagaggctaacaaaaccatgaggaactgtgaa
gaaaaggaagagagacttatgttgctggaatcatggcgaagctttgaagatgaatttgga
acagtatcagataaagaaagagtagacaaactcatgccagagaaagtcaaaaagagaaga
aaggtccaggctgatgatgggtctgatgcaggctgggaagagtactatgattacatcttt
ccagaagatgctgccaaccagcccaacctcaagctcctggccatggccaaactttggaag
aaacaacaacaggaaaaggaggctgccgagcaagacccagataaggacattgatgagact
gaatcctga
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