Vulpes lagopus (Arctic fox): 121478039
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Entry
121478039 CDS
T07435
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vlg01009
]
121478039 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121478039 (STAU1)
Protein phosphatases and associated proteins [BR:
vlg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121478039 (STAU1)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121478039 (STAU1)
mRNA cycle factors
Stress granule specific factors
121478039 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
121478039
NCBI-ProteinID:
XP_041588701
LinkDB
All DBs
Position
18:11842097..11897706
Genome browser
AA seq
700 aa
AA seq
DB search
MSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTTSSLPSENAGRPIQNSALPSAS
ITPTSAAAVPSSMAHPKEKTPMCLVNELARFNKIQPEYKLLREQGPAHCKVFTVQLTLGD
QHWEAEGTSIKKAQHTAAAKALEGTKFPKPIARPFRSEGRNPGIMRGPRQVPFKSVFRES
ITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVE
LSVGGQQFNGKGKTRQAAKHDAAAKALRTLQSEPPPERPEGRRLGEQVNGRESEEENLNK
SEISQVFEIALKRNLPVNFESFPLKQVARESGPPHMKSFVTKVSVGEFVGEGEGKSKKIS
KKNAAIAVLEELKKLPPLPTVERVKPRIKKKTKSIVRLQSSTDCGQGMNPISRLAQIQQA
KKEKEPEYMLLTERGLPRRREFVMQVKVGNHTAEGAGTNKKVAKRNAAENMLEILGFKVP
QAQPTKPALKSEEKTPIKKPGDGRKVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAGI
LPMVPEVAQAVGVSQGHHTKDFTRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNIS
SGHVPHGPLTRPSEQLDYLSRVQGFQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKD
VESCHDMAALNILKLLSELDQPSTEMPRTGNGPMSVCGRC
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcaagtgcaagttcagaacccatctgctgctctctcagggagccaaata
ctgaacaagaaccagtctctcctctcacagcctttgatgagtattccttctactactagc
tctctgccctctgaaaatgcaggtagacctattcaaaactctgctttaccctctgcatct
attacacccaccagtgcagctgcagttccttctagcatggcacaccccaaagagaaaacc
ccaatgtgtcttgtgaatgagttagcccgtttcaacaagattcagcctgagtataagctt
ttgcgtgagcaaggtccagctcactgtaaggtgtttacagtacagctaacacttggagat
cagcactgggaagctgaaggaactagtattaaaaaagcccagcacacagctgctgccaaa
gctttggaaggaacaaaatttcctaaacccatagcccgcccttttcgtagcgaaggaagg
aatccaggtattatgcgtgggccaagacaggttcctttcaaaagtgtgtttagagaaagc
ataacccctactgtagagctaaatgcactgtgcatgaaacttggaaaaaaaccaatgtat
aagcctgtcgacccttactctcggatgcagtccacctataactacaacatgagaggaggt
gcttatcccccaaggtacttttacccatttccagtaccacctttactttatcaagttgag
ctttctgtgggaggacagcagtttaacgggaaaggcaagacgaggcaggctgcaaaacac
gacgccgctgcgaaagccttgcggaccctacagagtgagcccccgcccgagagaccggag
gggaggcggctgggcgagcaggtgaatggaagagaatcagaagaagaaaatctcaataaa
tctgaaataagtcaagtgtttgagattgcacttaaacggaacttgcctgtgaattttgag
tctttccctctaaaacaggttgcccgggagagtggccccccccacatgaagagctttgtg
actaaggtgtcggttggagagtttgtgggggaaggtgaagggaagagcaagaagatttca
aagaaaaatgctgctatcgccgtccttgaggagctgaagaagctaccacccctgcctaca
gtcgagcgtgtgaagcccagaatcaaaaagaaaacaaaatccatagtcaggctacagagc
agcacagactgtggccagggaatgaacccgattagcagactggcccagatccagcaggcg
aaaaaggagaaggagccagagtacatgctcctcacagagcgaggcctcccacgccgcaga
gagtttgtgatgcaggtgaaggtgggaaaccacaccgcagaaggagcaggcaccaataag
aaggtggccaaacgcaacgcagccgagaacatgctggagatccttggtttcaaagtccca
caggctcagcccaccaaaccagccctcaaatcagaggagaagacaccaataaaaaaacca
ggggatggaagaaaagtaaccttttttgaacctggctctggggatgaaaatgggactagc
aataaagaggatgagtttaggatgccttatctgagtcatcagcagctgcccgctgggatt
cttcccatggtgcccgaggtggcccaggccgtaggagtcagtcaaggacaccacaccaaa
gatttcaccagggctgctccgaaccctgccaaggccacggtaactgccatgatagcccgt
gaattgttgtatgggggcacctcgcccacagccgagaccattttaaagaataacatctct
tcaggccacgtaccccatggacctcttacaagaccctctgagcagctggactatctttcc
agagtccagggattccaggttgaatacaaagacttccccaaaaacaacaagaacgaattt
gtatctcttatcaattgctcctctcagccacctctgatcagccacggtattggaaaagat
gtggagtcctgccatgacatggctgcactgaacatcttaaagttgctgtctgagttggac
caaccgagtacagagatgccaagaacaggaaatggaccaatgtctgtgtgtgggaggtgc
tga
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