Vulpes lagopus (Arctic fox): 121478105
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Entry
121478105 CDS
T07435
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03082
ATP-dependent chromatin remodeling
vlg05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121478105 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
121478105 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121478105 (SS18L1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121478105 (SS18L1)
GBAF(ncBAF) complex
121478105 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
121478105
NCBI-ProteinID:
XP_041588873
LinkDB
All DBs
Position
18:complement(1502771..1529795)
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AA seq
541 aa
AA seq
DB search
MPADPGPVPLPPPSAAPTPPASLPRPPRVSPGRPGRCPPSRSWWCSAGPISQEALPCGPE
AGGSSPASCTWTPRPPSWAHMLGSRALDDGEACGPWVCLHHVTDLGTCPWVHGGLTVAHG
GRHLAQPREAGPAGGMRYARTPATALHTCWRDASRAHCASPQMLDENHHLIQCILDYQSK
GKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHS
QGSLSDAIGTGLPPSSLMQGQIGNGPNHVMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSG
PASQSVPLQGQGAIGNYVSRANINMQSNPVSMMHQQAASSHYNSAQGGSQHYQGQSSIAM
MGQSGQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGGEQYGHSQAASEPMSQQYYPDG
HGDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQAGYQQQYPNQ
QSYPGQQQGYGPAQGAASQYSGYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQ
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggaccccgggcctgtccccctgccccccccctctgctgctcccactcccccg
gcctccctccctcgcccccctcgggtctccccaggccgtcccgggcggtgtcccccttcg
aggtcgtggtggtgctccgcagggcccatctcccaggaggcactgccgtgtggccctgag
gcggggggctccagtccagcgtcctgcacgtggactccgcggccccctagctgggcgcac
atgctggggtcaagggccctagacgacggggaggcctgtgggccgtgggtttgcctccac
cacgtgacagacctcggaacctgcccctgggttcatgggggactgaccgtggcgcatgga
gggcggcacttagcacagccccgggaggccggtcctgctggggggatgaggtacgcccgc
acaccggcgacggcgctgcacacctgctggagggacgccagccgtgctcactgtgcttcc
ccgcagatgctggatgagaaccaccacctgatacagtgtatcctggactaccagagcaag
ggcaagacggccgagtgcacccagtaccagcagatcctgcaccggaacctggtctacctg
gccacgattgcggactccaaccagaacatgcagtccctgctccccgctccgccaacgcaa
aacatgaacctgggccccggagcactgtcccagagtggctccagccagggcctgcactcc
cagggcagcctcagtgatgctatcggcacgggcctccccccgtcctccctcatgcagggc
cagatcggcaacggtccaaaccatgtgatgcagcagacagcacagagcacgctgcccacc
acctccatgagtatgtcgggcagtggccacggcacggggcctggctacagccactcggga
cccgcctcgcagagtgtgcccctgcagggccagggcgccatcggcaactacgtgtcacgg
gccaacatcaacatgcagtccaatccagtgtccatgatgcaccagcaggcagcctcgtcc
cactacaactcggcacagggcgggagccagcattaccagggccagtcgtccatcgccatg
atgggccagagcgggcaggggagcagcatgatggggcagcgacccatggcgccctaccgg
ccctcccagcaagggtcctcccagcagtacctgggccaggaagagtactacggcggcgag
cagtatggccacagccaggccgcctcggagcccatgagccagcaatactaccctgatgga
catggtgactacgcctaccagcagtcatcctacacggagcagagttatgaccggtccttc
gaggaatccacgcagcactactacgagggcggaaactcgcagtacagccagcagcaggcg
gggtaccagcagggcgcagcccagcagcaggcggggtaccagcagcagtaccccaaccag
cagagctaccccgggcagcagcaaggctacgggcccgcccagggagccgcctcgcagtac
tccggctaccagcaaggacaaggccagcagtacggaagctacagagcgtctcagacgggc
ccgtccgcccagcagcagcggccttacggctatgagcagggccagtatggaaattaccag
cagtag
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integrated database retrieval system
