Vulpes lagopus (Arctic fox): 121478769
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Entry
121478769 CDS
T07435
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121478769 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121478769 (DHX36)
03012 Translation factors [BR:
vlg03012
]
121478769 (DHX36)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121478769 (DHX36)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121478769 (DHX36)
Translation factors [BR:
vlg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121478769 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
AAA_23
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-GeneID:
121478769
NCBI-ProteinID:
XP_041589988
LinkDB
All DBs
Position
19:complement(49139714..49192208)
Genome browser
AA seq
1006 aa
AA seq
DB search
MSYDYHQSWGRDGGPRSSGGGYGGGHGGSRGPGGGGGGGGGGGGGRGGRGRHPGHLKGRE
IGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISWFAPED
HGYGTEIPAENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVALDQ
QLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQ
FILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPR
KQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKV
ILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQFKRGF
MQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVMEMIDDDKVDLNLIAALIRHI
VLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPP
GVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGR
AGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPP
SDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIA
ASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCW
EYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPK
VAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDC
TEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIE
SPHPVDWKDTKSRDCAVLSAIIDLIKTQEKASPRNLPPRIQDGYYS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgattaccaccagagctggggccgggatggcgggccccgcagctccggcggc
ggctacggaggaggccacggagggagccgaggccccggcggcggcggaggcggaggaggc
ggcggcggcggcggtcgaggcggccgaggccgacaccccgggcacctgaagggccgcgag
atcggcctgtggtacgcgaagaagcagggtcagaagaacaaggaagcggagaggcaggag
agagctgtagtacacatggatgaacgtcgagaagaacagattgtgcagctgctacattca
gtccaagctaagaatgataaagattcagaagcacagatctcttggtttgctcccgaagat
catggatatggtactgaaattcctgcagagaacaaaccaaactcagagaagaagctggag
aaccaggaaaagaaattgataagtcaagaaaagagaacatttagaatcagggacaaatat
attgaccgagattctgagtatctcttgcaagaaaatgaaccagatgtagccttagaccaa
cagctgttggaagacttacgaaagaaaaaaagtgaccttcggtatatcgaaatgcagcat
ttcagggaaaagctgccttcatatggaatgcaaaaggaattggtaaatatgattgataac
catcaagtgaccgtaataagtggtgaaactggttgtggaaaaactactcaagttactcaa
ttcattttggatgactacattgaaagaggaaaaggatctgcatgcaggatagtttgcacc
cagccaagaagaattagtgccatttcagttgcagagagagtggctgcagaaagggcggaa
tcgtgtggcaatggtaacagtactggataccagattcgtctccagagccggttgccaagg
aagcagggttctatcttatactgtacaacaggaatcatcctgcagtggctccagtcagac
tcgcatttgtccagtgttagtcatattgtgcttgatgaaattcatgagagaaatctgcaa
tcagatgttttaatgactgttattaaagatcttctcaattttcgacctgacctgaaagta
atattgatgagtgcaactttgaatgctgagaaattttcagaatattttggtaactgtcca
atgatacacatacctggttttacctttccggttgtggagtatcttttggaagatataatt
gaaaaaataagatatgttccagaacaaaaggaacaaaggtctcaatttaagagaggtttc
atgcaagggcatgtaaatagacaagaaaaagaagaaaaagaagcaatctataaagaacgc
tggccagattatgtaagggaactgcgaaaaagatattctgcaagtactgtagatgttatg
gaaatgatagatgatgataaagttgatctgaatttgattgctgcccttatccgacacatt
gttttggaagaagaggatggtgcaatattggtctttctaccaggctgggacaatatcagc
actttacatgacctcttgatgtcacaagtgatgtttaaatcagacaggtttcttattata
cccctacattcactgatgcctacagttaaccagacacaggtatttaaaaaaacccctcct
ggtgttcggaaaatagtaattgctactaatattgcagagactagcattaccatagatgat
gtagtttatgtgatagatggaggaaaaataaaagaaacacactttgacacacaaaacaac
atcagtacaatgtctgctgagtgggttagtaaagctaatgccaaacaaaggaaaggtcga
gctggaagagttcaacctggtcattgctatcatctgtataatgggcttcgagcaagcctt
ctggatgactatcaactgccagaaattttgagaactcctttagaagaactttgtttacaa
ataaagattttaaggctaggtggaattgcttattttctgagtaggttaatggatccacca
tcagatgaagcagtgtcactgtccataaaacacctgatggaactgaatgccttggataaa
caagaagaattaacaccccttggagtccacttagcacgattaccagttgagccacacatt
ggaaaaatgattctttttggagctctattctgttgtttagacccagtactcaccattgct
gctagtctcagcttcaaagatccctttgttattccgttgggcaaagaaaagattgctgat
gcaagaagaaaagaactagcaaaagacactaaaagtgaccacctgacagttgtaaatgca
tttgagggctgggaagaagctaggcgacgtggtttcagatacgaaaaagactattgctgg
gaatattttttgtcttcaaatacattgcagatgctgcacaacatgaaaggacagtttgct
gagcatcttcttggagctggatttgtaagcagtagaaatcctaaagatccaaaatctaat
ataaattcagataatgagaagataattaaagcggtcatctgtgctggtttatatcccaaa
gttgctaaaatccgactaaacttgggtaaaaaaagaaaaatggtcaaggtttacacaaaa
actgatggactagttgctattcatcctaaatctgttaatgtggagcaaacagaatttcac
tacaactggcttatctatcatctgaagatgagaacaagtagtatatacttgtatgactgc
acagaggtttctccatactgtctcttgttctttggaggtgatatttccatccagaaggat
aacgatcaggaaactattgctgtagatgaatggattgtctttcagtctccagcaagaatt
gcccatcttgttaaggaattaagaaaggagctagatacccttctgcaagagaagatcgaa
agtccgcatcctgtagattggaaggacactaaatccagagactgcgcagtactgtcagct
attatagacttgatcaaaacacaggaaaaagcaagtcccaggaacttaccgccacgaatc
caggatggatattacagctga
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