Vulpes lagopus (Arctic fox): 121478776
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Entry
121478776 CDS
T07435
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04360
Axon guidance
vlg04724
Glutamatergic synapse
vlg04726
Serotonergic synapse
vlg04929
GnRH secretion
vlg04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
121478776 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
121478776 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
121478776 (TRPC1)
04726 Serotonergic synapse
121478776 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
121478776 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vlg04040
]
121478776 (TRPC1)
Ion channels [BR:
vlg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121478776 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
121478776
NCBI-ProteinID:
XP_041590004
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All DBs
Position
19:39075544..39156085
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AA seq
794 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSNDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIF
SLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKE
WRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLL
GFRTSKYAMFYPRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggacctctcgggcgcctcctcctcctccctacct
tcctccccatcctcctcttcgtcgccgaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctgcagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaattaatggagcgaattcagaatcctgaatattcaacaactatggat
gttgcacctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgttg
aaacaggatgtatctctacccaagccccatgcagttggctgtgaatgcacattgtgttct
gcaaaaaacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgt
ttggccagtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaa
cttagtgctgatttaaaagaattaagccttgtggaggtggaattcaggaatgattatgag
gaactagcccggcaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaattca
agagaattggaagttattctaaaccatacatctaatgatgagcctcttgacaaacgggga
ttactagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaag
gagtttgtctcacagtctaactgccagcagttcctgaacactgtttggtttggacagatg
tcaggttaccgacgtaagcccacctgtaagaagataatgactgttttgacagtgggcatc
ttttggccagttttgtcactttgttatttgatagctcccaaatctcagtttggcagaatc
attcacactccttttatgaaatttattattcatggagcatcatatttcacattcctgctg
ttattaaacctctactctcttgtctacaatgaggataaaaaaaacacaatggggccagcc
cttgaaagaatagactatctacttatactgtggattattggtatgatttggtcagatatt
aaaagactctggtatgaaggattagaagactttttggaagaatcccgtaatcaactcagt
tttgtcatgaattcgctttatttggcaacttttgccctcaaagtggttgctcacaacaag
tttcatgattttgctgatcggaaggactgggacgcattccatcctactctggtggcagaa
gggctttttgcatttgcaaatgttctaagttatcttcgtctcttttttatgtatacaaca
agctctatattgggtccactacagatttcaatgggacagatgttacaagattttggaaaa
tttcttgggatgttccttcttgttttgttttctttcacaattggacttacacaactgtat
gataaaggctataccccaaaagaacagaaggactgtgtaggcatcttctgtgaacagcaa
agcaatgatactttccattcgttcattggcacttgttttgctttgttctggtatattttc
tccttagcacatgtggcaatctttgtcacgagatttagttatggagaagaattgcagtcc
tttgttggagcggttattgttgggacgtacaatgtcgtggtagtgattgtgctcaccaag
ctgctggtggcaatgcttcacaaaagcttccagttgatagcaaatcatgaagacaaagaa
tggaagtttgctcgagcaaagttatggcttagctactttgatgacaaatgcacattaccc
ccacctttcaacatcattccttcaccaaagactatatgctacatgattagtagcctcagt
aagtggatttgctctcatacatcaaaaggcaaagttaaacggcaaaacagtttaaaggaa
tggagaaatctgaagcaaaagagggatgagaactaccaaaaagtgatgtgctgcttagtg
catcgttatctgacgtccatgaggcagaagatgcagagtacagatcaggcaactgtggaa
aacctaaatgaactacgtcaagatctgtcaaaattccgaaatgaaataagggatttactt
ggctttcggacttctaaatatgctatgttttatccaagaaattaa
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