Vulpes lagopus (Arctic fox): 121478845
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Entry
121478845 CDS
T07435
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vlg04040
]
121478845 (SCN10A)
Ion channels [BR:
vlg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121478845 (SCN10A)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Na_trans_cytopl
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
121478845
NCBI-ProteinID:
XP_041590161
LinkDB
All DBs
Position
19:complement(8744505..8834465)
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AA seq
1957 aa
AA seq
DB search
MEFPFGSLETTNFRRFTPESLVEIEKRIAAKQAAKKAKGKHREQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLDKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVGMTQTELPDRIEYVFTVIYTFEALIKILARGF
CLNEFAYLRDPWNWLDFSVITLAYIGEATALRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCAALNETGNYSSYGKPDF
YYNKPGTSDPLLCGNGSDAGHCPKGYLCLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKT
FQETLEMLRKEQEVLAALGIDTASLHSYNGSPLPSKNASERMHRMKPRVSEGSTDDNKSP
QSDPYNQRRMSFLGLTSGRRRASHGSVFHFRTPCLDTSFPDGVTDDGVFPGDRESHRGSL
LLGGGTSQQGPLLRSPLPQPSNPGSGHGEDGHSTLPTGELAPGGIEVSAFDAGQKKTFLS
AEYLNEPFPAQRAMSVVSIMTSVLEELEESERRCPPCLTSFAQKYLIWECCPTWVKLKTV
LFGIVTDPFAELTITLCIVVNTVFMAMEHHGMSSAFEAMLQIGNIVFTVFFTAEMVFKII
AFDPYYYFQKRWNIFDCIIVTVSLIELGAARKGSLSVLRTFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRDNRRNISAPNEEWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSVCLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LATPDEDGEVNNLQVALARIQAFGHRTKKAICNFFTRPCLLPWPKAEPQLVVKLPLSSSK
AENHIAANAAVGSPRGLPVSRGLRDDHSDFITNPNIWVSVPIAEGESDLDDLEEDGEEDS
QSSQQEAILQGQQEQLQVETCEGHMAPRSPGSGMSSEDLASYVDEKWKDEAAAQAPAEGG
DDTSSSEGSTVDCLDPEEILRKIPELADDLEEPDDCFTEGCLRCCPCCKVDISKFPWTVG
WQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYHLDQKPTVKALLEYTDRVFTFIFV
LEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILQYSDVASIKALRTLRALRPL
RALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGKFGRCINKTNEYF
SLVPLSIVNNISDCKYQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVD
ARDVNLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTKQAFDIVIMVLICLNMITMMVETD
EQSAEKTKILNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFIVVVLSIGSLVFSV
ILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYSIFGMASFPHVSWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYC
DPNLPNSNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATQESSEPLSE
DDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNQNILIQMDLPLVPGDKI
HCLDILFAFTKNVLGESGELDSLKANIEEKFMATNVSKTSYEPIATTLRWKQEDISATVI
QKAYRSYVLHRSMTISNPPAVPRAEEAVPPPDEAFVEFMVNENCALPDKSETASAASFPP
SYDSVTRGLSDQINMSTSSSMQNEDEGTSNKVTAPGP
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccctttgggtccctggaaactaccaactttcgtcgattcactccagagtcc
ctggtggagattgaaaagagaattgctgccaagcaggcagcaaagaaagcaaaaggtaag
cacagggagcagaaggaccaagaagagaagcctcggcctcagctagacttgaaggcttgc
aaccagctgcccaagttctacggtgagctcccagcagagctggttggagagcccctggag
gatttggaccccttctacagcacacaccggacatttatggtgctggacaaagggaggacc
atttcccggtttagtgctactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattaca
gtcactattttggtcaattgtgtgggcatgacccaaaccgagcttccagacagaatcgag
tatgtctttactgtcatttacacctttgaagccttgataaagatactcgcaagaggattt
tgtctaaatgagtttgcttacctgcgagatccttggaactggctggattttagtgtcatt
accctggcatacattggtgaagcaacagctctccgagggatctcaggcttgcggacattc
agagttcttagagctttaaaaacagtttctgtgatcccagggctgaaggtcattgtggga
gctctgatccactcagtgaggaaactggcagatgtgaccatcctcactgtcttctgcttg
agtgtctttgccctggtgggcctacagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgtgcagctctcaatgaaacgggcaattactcctcttacggaaaaccagatttc
tactataacaagcctggcacttcagatcccttactgtgtggcaatggatctgatgcaggc
cactgccctaaaggttatctctgtcttaaaacatctgacaacccagattttaactacacc
agctttgattcctttgcttgggctttcttgtcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcatctgggaaaatgtatatggtctttttt
gtgcttgtcatcttcttgggatccttctacctggtcaatttgatcttggctgtggtcacc
atggcatatgaggagcagaaccaggcaaccattgatgaaattgaagccaaggagaagaca
tttcaagagaccctggagatgctccggaaggagcaagaggtgctggcagcgctggggatt
gacacagcctctctccattcctataatggctcacctttaccctccaaaaatgccagtgag
agaatgcacagaatgaaaccaagggtgtcagagggctccacagatgacaacaaatcacct
caatctgatccttacaaccaacgcagaatgtctttcctaggcctcacttctggaagacgc
agggctagtcatggcagtgtgttccatttccgtaccccttgcctggatacctcattccct
gatggggtcacagatgatggagtctttcctggagaccgtgagagccatcggggctccctg
ctgctgggtggaggtaccagccagcaaggccccctcctaaggagtccactgcctcaaccc
tctaaccctggctcaggacatggagaagatggacactccacattgcccactggtgagctt
gcccctggaggcatcgaagtctcggcatttgatgcaggacagaagaagactttcttatca
gcagaatacttgaatgaacctttcccagcccaaagggcaatgagtgtggtcagcatcatg
acttctgtcctcgaagagctcgaggagtccgaacggagatgcccaccctgcttgaccagc
ttcgctcagaagtatctgatctgggagtgctgccccacatgggtgaagctcaagacggtt
ctctttggcattgtgacggacccctttgcggagctcactatcaccttgtgcattgtggta
aacacagtcttcatggccatggagcaccacggcatgagctctgcctttgaagccatgctc
cagataggcaacattgtctttactgtgttttttactgctgaaatggtcttcaaaatcatt
gccttcgacccctactattacttccagaagagatggaacatctttgactgcatcattgtc
actgtgagcctgatagagctgggtgcggccaggaaggggagcctgtcagtgctgcggacc
ttccgcttgctgcgggtctttaagctggccaagtcctggccaaccttaaacacactcatc
aagatcatcgggaactcagtgggggcactaggaaacctcaccatcatcctggccatcatt
gtctttgtcttcgctctggttggcaaacagctacttggggaaaactaccgtgacaaccgg
cgcaatatctctgcacccaatgaagaatggccacgctggcacatgcatgacttcttccac
tccttcctcattgtcttccggatcctgtgtggagagtggattgagaacatgtgggcctgc
atggaagttggccagaaatccgtatgcctcatccttttcttgacagtgatggtgctgggg
aacctggtagtcctcaacttgttcatcgccctgctgctgaactccttcagtgccgacaac
cttgcaactccagatgaagatggggaggtgaacaacctgcaggtggccctggcacggatc
caggcatttggccatcgtaccaagaaggccatttgcaacttcttcactaggccctgcctg
ctgccctggcccaaggcagagccccagctggtggtgaaactcccactctccagctccaaa
gctgaaaaccacattgctgctaatgcagctgtggggagccctagagggctcccagtgtcc
agaggcctcagggacgaccacagtgacttcatcaccaatcctaacatatgggtctctgtg
cccattgcggagggtgaatctgacctcgatgacctggaggaagatggtgaggaggattct
cagagttcccagcaggaagcgatcctccaagggcagcaggagcagctgcaagtcgagacg
tgtgagggccacatggcgcccaggagcccaggctctggaatgtcctctgaggacctggct
tcctacgtggatgagaagtggaaagacgaggctgctgcccaggcgcctgcagagggaggg
gacgataccagctcctccgagggcagcacggtggactgcctggatcccgaggagatcctg
aggaagatccctgagctggcagatgaccttgaagaaccagacgactgcttcacggaaggc
tgtcttcgctgctgtccctgctgtaaagtggacatcagcaagtttccatggactgtggga
tggcaggtgcgcaagacctgctaccgcatcgtggagcacagctggtttgagagcttcatc
atcttcatgatcctgctcagcagtgggtctctggcctttgaagactatcaccttgatcag
aagcccacagtgaaggccttgctggaatatactgacagggtgtttacttttatcttcgtg
ctggagatgctgctcaagtgggtggcctacggctttaagaagtacttcaccaatgcctgg
tgctggctggactttctaatcgtgaacatctccctgacaagccttatagcgaagatcctg
caatattctgatgtggcatccatcaaagcccttcggaccctccgtgccctgaggcccctg
cgggctctgtctcgatttgaaggcatgagggtggttgtagatgccctggtgggtgccatc
ccatccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatcatg
ggtgtgaacttctttgcggggaagtttgggcgatgcatcaacaaaaccaatgaatacttt
tctcttgtgcctttgtctattgtgaataacatatctgattgtaaatatcagaaccacact
ggcagcttcttctgggtcaatgtgaaggtcaactttgataatgttgcaatgggttaccta
gcacttctgcaggtggcaacctttaaaggctggatggacataatgtatgctgctgttgat
gcccgagatgtgaacttgcagcccaagtgggaggacaacgtgtacatgtacttgtacttt
gtcatcttcatcatttttggcggcttcttcacactcaatctcttcgttggggtcataatt
gacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatgacagaggag
caaaagaagtactataatgccatgaagaagctaggctctaagaagccccagaagcccatc
ccacggcccctgaacaagtaccagggctttgtctttgacattgtgaccaaacaagctttt
gacattgtcatcatggtcctcatctgcctcaacatgatcaccatgatggtggagactgat
gagcagagtgcagaaaagacaaaaattcttaacaaaatcaaccagttctttgtggctgtc
tttacgggcgagtgtgtcatgaagatgtttgccttgcggcattactacttcaccaatggt
tggaatgtgtttgacttcattgttgtggtcctctccattggaagcctggtgttttctgta
atacttacgtcacttgaaaattacttctctccaacgctcttccgagtcatccgcctggcc
cgaattggccgcatcctcaggcttatacgagcagccaagggaatccgcacactactcttt
gcccttatgatgtccttgcctgccctcttcaacatagggcttctgctcttccttgtcatg
ttcatctactccatcttcggcatggctagcttcccccatgtaagttgggaagctggcatc
gatgacatgttcaactttcagaccttcgccaacagcatgctgtgcctcttccagatcacc
acgtcggctggctgggatggcctcctcagccccatcctcaacacggggcccccttactgt
gaccccaatctgcccaacagcaatggctcccgggggaactgtgggagcccagctgtgggc
atcctcttcttcaccacatacatcatcatctccttcctcattgtggtcaacatgtacatt
gcagtgattctggagaacttcaatgtggccacacaggagagcagtgaacctctgagtgag
gatgacttcgacatgttctatgagacctgggagaagtttgacccagaggccactcagttt
attaccttttctgccctctcagactttgcagacaccctttctggccccctgcgaatccca
aaacccaatcagaatatattaatccagatggacctgcccttggtccctggagataagatt
cactgtttggacattctttttgccttcactaagaatgttctgggagaatccggagagttg
gattctctgaaggcgaatattgaagagaagtttatggcaactaatgtctcaaaaacatcc
tatgaaccaatagcaaccaccctccggtggaagcaggaagacatttcagctactgtcatt
caaaaggcctatcggagctatgtgctacaccgctccatgacaatttccaaccccccagct
gtgcccagggcagaggaggctgtgccacccccagatgaagcttttgttgaattcatggta
aatgaaaattgtgcactcccagacaaatctgaaactgcatctgccgcatctttcccacca
tcctatgacagtgtcactagaggccttagtgatcaaatcaacatgagcacatctagctca
atgcagaatgaagatgaaggtaccagtaataaagtgactgctcctgggccctag
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