Vulpes lagopus (Arctic fox): 121479423
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Entry
121479423 CDS
T07435
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg00562
Inositol phosphate metabolism
vlg01100
Metabolic pathways
vlg04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
121479423 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
121479423 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121479423 (SYNJ1)
Enzymes [BR:
vlg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
121479423 (SYNJ1)
Membrane trafficking [BR:
vlg04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
121479423 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
121479423
NCBI-ProteinID:
XP_041590910
LinkDB
All DBs
Position
20:11854047..11945648
Genome browser
AA seq
1574 aa
AA seq
DB search
MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
GLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRIDSSDEDRISEVR
KVLNSGNFYFAWSASGISLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
LLGSKEGEHMLSKAFQSHLKASEHVADIHMVNFDYHQMVKGGKAEKLHSVLKPQVQKFVD
YGFFYFNGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQLVTR
FQEVFRSMWSVNGDSISKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCV
GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNA
GNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGR
MLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGK
VTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDGSKI
LYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVL
VSIKSSVQENNFFDDALIDELLQQFTNFGEVILIRFVEDKMWVTFLEGSSALSVLNLNGK
ELLGRTITITLKSPDWIKNLEEEMSLEKINVALPSSTSSTLLGEDAEVTADFDMEGDVDD
YSAEVEEILPQHLQPSSSSGLGTSPGSSPRTSPCQSPTISEGPVPSLPVRPSRAPSRTPG
HPSSQSSPVDTLPATQLQQRDSQPLEPKRPPPPRPIAPPARPAPPQRPPPPSGARSPAPA
RKEFGGVGAPPSPGAARREMEAPKSPGTTRKDTIGRNQPSPQAGFTGPGPAGYSAARPTV
PPRAGVISAPQSHARASAGRLTPESQSKPSEVLKGPVLLPEPLKPQAALPVQASLPPPVQ
KMQEPLVPVAAPLPQSAPQPNLETPPQPPPRSRSSHSLPSEPSSQPQVKTNGISAVRLES
PLKSDPFEDLSFNLLAVSKAQLSVQTSSVLTPNPKGLIQLPSATQSNMSTLSSVSCMPPI
PARSKSQENMRCSPNPFITSLTSTNPFTDRTAAPGNPFRTESQESELSSWLSKEEPVANS
PFPSLKPLGYNNSKLSSSFDGFKDNFDLQGQSTAKVSNPKGWVTFEEEEDFGVKGKSKSS
CLDILGHQPSSLSGSSMTFDDDWNKGTDVPLCVQPSRRPPPPPVTLLPSGTTPSVAPFTT
LASKASPTLDFTER
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagcaaaggatttcggatctatcacaaactggaccccccacctttcagtctc
atagtggaaactaggcataaggaggaatgtctcatgttcgagtctggggctgtagctgtg
ctttcatctgcagaaaaagaggcaatcaagggtacatactccaaagtactggatgcatat
ggacttttaggtgttttacgattaaatcttggtgataccatgttacattatctggtttta
gtcactggatgtatgtctgttggaaaaattcaagaatctgaagttttccgagttacttct
actgaattcatatcactacgaattgattcttcagatgaggatcgcatttcagaagtgcga
aaagttttgaattcaggaaacttttattttgcatggtctgcatctggaatcagtttagat
ctaagtcttaatgcacatcgtagcatgcaagaacacacaactgataatagatttttctgg
aatcagtctttgcatttgcatctcaagcactatggtgtgaattgtgatgactggttatta
cgtctcatgtgtgggggagtagaaatcagaacaatttatgctgctcataagcaggcaaag
gcttgcctcatttccagactcagctgtgaacgagctgggaccaggtttaatgtccgggga
acaaatgatgatggtcacgttgctaattttgtagaaacagaacaggttgtatacttagat
gactctgtttcttctttcatacaaatccggggatccgttccattgttctgggagcaacca
gggttgcaggtgggatctcatcgtgttcgtatgtcaaggggatttgaagccaatgcacct
gcttttgataggcattttagaacacttaagaatttatatggtaaacaaataatagtaaat
ttgcttggatctaaggaaggtgaacatatgctaagtaaggctttccagagtcatttgaaa
gcttctgaacatgttgctgatatccacatggtgaattttgactatcatcaaatggttaaa
ggaggaaaggcagaaaaattgcatagtgttcttaaacctcaagtccaaaagtttgtagat
tatggatttttttatttcaatggaagtgaagtccaaagatgccagagtggtactgttcga
acaaactgcttggactgtcttgatagaacaaatagtgtgcaggcattccttggcttagag
atgctagctaaacagctggaagctctcggcttagctgaaaagcctcagttggtgactcgc
tttcaagaagtttttcggtcgatgtggtctgtgaatggtgattccatcagtaagatatac
gcagggactggagctcttgaaggaaaggctaaggctggaaagttaaaagatggtgctcgt
tctgttactagaacgattcagaataacttctttgacagctccaagcaagaggccatagat
gttttactactgggaaatactctaaatagtgatttagctgacaaagctcgagcacttcta
actacaggaagtttgcgtgtttctgaacagacattacagtcagcatcttccaaagtacta
aagagcatgtgtgagaatttctacaagtattcaaagcccaagaaaattcgagtatgtgtt
ggaacctggaacgtgaatggcgggaagcagtttcgcagtatagcttttaagaatcagaca
ctcaccgactggcttcttgatgcacctaagttagctggcatccaggaatttcaagacaaa
agaagtaagccaacagatatatttgcaattggttttgaagaaatggttgagttaaatgct
ggaaacatcgtgaatgcaagcacaaccaatcagaagctctgggctgtggaactgcagaag
accatctccagagacaacaagtatgtgctgctggcttctgagcagctggtgggcgtctgc
ctgtttgtttttatcagaccacagcatgctcctttcatcagggatgttgcagttgatact
gtgaagactggaatgggaggtgccactggaaataagggagcagttgcaatccgaatgcta
ttccatacaacaagcctctgcttcgtctgtagccactttgctgcagggcaatcacaagtc
aaagaaagaaatgaagattttgtagaaattgcacggaagttgagttttccaatgggaagg
atgctgttttcccatgactacgtattttggtgtggtgatttcaactatcggattgatctc
cctaatgaagaagttaaagagctcataaggcagcaaaattgggattctcttatagcagga
gatcagcttatcaatcaaaaaaatgctggacagatttttagaggatttttagaaggaaaa
gtgacctttgctccgacatacaaatatgacttgttttctgacgactatgacaccagtgaa
aagtgccgcacccctgcttggacagaccgtgtcctctggagaagaaggaagtggcctttt
gacagatcagctgaagatttagatcttctaaatgctagttttcaagatggaagcaaaatc
ctgtacacatggactcctggcactttgctgcactatggaagagctgagctgaagacttct
gaccataggcctgtcgttgccctgattgatatagatatatttgaagttgaagctgaagag
aggcaaaacatttataaagaagtaatcgcagttcagggcccaccagatggtacagtattg
gtctcaatcaaaagttctgtccaagaaaataattttttcgatgatgctttgattgatgag
cttctgcagcagtttacaaattttggtgaagttatcctcataaggtttgtggaagataaa
atgtgggtcacatttttggagggaagctctgccttgagtgttctgaacctaaatggtaaa
gagttattgggtcggactataactattactttaaaaagtccagactggatcaaaaatttg
gaggaagaaatgagtttagagaaaattaatgttgcattgccatcatcgacaagctccacc
ctgcttggtgaagatgcggaggtcaccgcagattttgatatggaaggtgatgtcgatgac
tacagtgctgaagtggaggaaattcttccccagcacctccagccatcttcaagttctggc
ctgggcacttccccaggctcttcaccccggaccagtccctgccagtcaccgaccatatcg
gagggccctgtaccttcccttcctgtaagaccaagccgagcaccatcaagaactcctggg
cacccgagctcacaaagttctcctgtcgacactctcccagcaacacagctacagcaaaga
gattcccagccccttgagcccaaacggccacctcctccccgcccgattgctccccccgca
cgccctgcgcccccccagagaccacctccaccttcaggggctaggagtcctgcacctgct
agaaaagaattcggaggtgttggagcccctcccagtcctggggcagctaggcgagagatg
gaagcacccaaaagccctggaacaacacggaaagatactataggacgcaatcagccttca
cctcaagcaggattcacaggcccaggacctgctggatacagtgcagccagaccgactgtt
ccaccccgtgcaggagtgatcagtgccccccagagccatgctcgggcatctgctggaaga
ttgactcctgaaagccaaagcaaaccatcagaagtcctgaaagggccagttcttcttcct
gaaccactgaagcctcaggctgcccttcctgtgcaggcttctctgcccccacctgttcag
aagatgcaggagcctcttgtccctgtggcagcacctttgcctcagtctgccccccagccg
aacttggaaaccccgccacagccaccccctcggagccggtcgtcccacagcttgccttca
gagccttcatcacaaccacaggtaaaaacaaatggaatctctgctgtcagactggaatca
ccgttaaagagtgacccatttgaagatctgtcatttaatctgcttgctgtatcaaaggct
cagttatctgttcaaacatcatctgttctaactccaaacccaaagggattgattcagttg
ccttctgcaacacaaagtaacatgagtactttgagttctgtaagttgcatgcctccaatt
ccagcccggagtaagtcccaggaaaatatgcgatgttctccaaacccatttattacgagc
ttgaccagcacaaatccttttacggacaggactgctgctcctggaaacccatttagaact
gagtctcaagaatctgagttaagttcatggctctccaaagaagagcctgttgctaacagt
cctttcccttctctgaagcctcttggttataacaatagcaagctttcatcttcatttgat
ggttttaaggacaattttgatctgcagggccagtctacggcaaaagtcagcaacccaaaa
ggatgggtaacgttcgaggaagaagaggactttggtgtaaaaggaaagtcaaagtcgtct
tgcttagacatactgggtcatcagccaagttcactttctggctccagcatgacctttgat
gatgactggaataaaggtacagatgttcctctctgtgtgcagccatcaagaagaccacct
ccacctcctgtcactctgctcccatctggcaccaccccttccgtagctcctttcacaacc
ttggcatctaaggcatcacccacactagacttcacagaaagataa
DBGET
integrated database retrieval system
