Vulpes lagopus (Arctic fox): 121479995
Help
Entry
121479995 CDS
T07435
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121479995 (PDZRN4)
Enzymes [BR:
vlg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121479995 (PDZRN4)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
121479995 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
121479995
NCBI-ProteinID:
XP_041592133
LinkDB
All DBs
Position
21:33152218..33508634
Genome browser
AA seq
1029 aa
AA seq
DB search
MGFAPERSAEAVGPDSKCKLCGQVPGEPLCTPRGHVFCAACLLPWVARRRRGPLQRQPPA
PGELPRAPPARSLVQQPRVPGCGRSARLHELAAHVERGARRRPRGCVSGPGGRGGGELPA
RGGCGAAPGPGPGRGGGARGGPPGGSGRGARVLAWRRRERALRAQLRALQGEVQLAARGY
REKFAQYMAHVRTFAGELELELGGGRGRDGEHKPFTIVLERENDTLGFNIIGGRPNQNNK
EETSAEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVEAFRNAKEPIVV
QVLRRTPLSKPAYGTAPEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDVCPFLLSDSC
HSLHPMEHEFYEDNEYLSSLPADVDRAEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDT
GIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECKRIVLLVARPEI
QLDEGWLEDERNEFLEELNLEMLEEQHNEAMQCTANEVEQPKKQEEEEGTTDTATSSSNN
HEKDSGVGRTDESLRNDESSEQENAAEDPKGASLRSTRGLGQSQDTLGSVELQCNESLVS
GDYMDSDCVGHAEEECERFRQLLELKCKIRNHGEYDLYYSSSTIECHQGMGVEHELQLLN
EELRSIELECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSVDVPRGKLDDILEHPEK
SDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRSTAGASRPSSGASSKES
TSSRANTAEQGCSSVEAKEKASESCSRLSDQDRPSGEQRIPYLSPYHSSSYRCANIPAHA
RHYQSYMQLIQQKSAVEYAQSQLSLVSMCKEPQKGSEPKMEWKVKIRSDGTRYITKRPVR
DRILRERALKIKEERSGMTTDDDTMSEMKMGRYWSREERKQHLVRAKEQRRRREFMMRSR
LECLKESPQSGSEGKKELSILELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVH
NAFLSVTTV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccccggagcgctccgccgaagcggtgggcccggactccaagtgcaaactg
tgcggccaggtgccgggggagccgctgtgcacgccgcgcgggcacgtcttctgcgccgcc
tgcctgctgccctgggtggcgcggcggcgccggggcccgctgcagcgccagccccccgcg
ccgggcgagctgccccgggcgccgcctgcgcgcagcctcgtgcagcagccgcgcgtcccg
ggctgcggccgctcggcccggctgcacgagctggcggcgcacgtcgagcgcggggcccgg
cgccgcccgcggggctgcgtctcggggcccggcggccgcggcggcggggagctgcccgcg
cgggggggctgcggcgcggcgccggggcccgggcccggccggggcgggggcgcgcgcggg
gggccgccgggcgggagcgggcgcggggcgcgagtcctggcctggaggcggcgcgagagg
gctctgcgggcgcagctccgggcgctgcagggcgaggtgcagctcgcggcccgcgggtac
cgggagaagttcgcgcagtacatggctcacgtccgcaccttcgccggggagctggagctg
gagctgggcggcggccgcggccgggatggagaacataagccattcaccattgtgttagaa
agagaaaatgacacattgggattcaatattataggaggtcgaccaaatcagaataataag
gaagaaacatcagcggaaggaatttatgtttcaaaaattttggaaaatggacctgctgac
agagcagatggcctggagattcatgacaaaatcattgaggtcaatgggaaggatctctca
aaggccacccatgaagaggcagtggaagcttttcgaaatgccaaggagcccattgtggtc
caggtgctaagacgaacacctctcagtaaaccagcctatggaacggccccagaagtgcag
ctcatgaacgccagcactcagacagacatcaccttcgaacacatcatggctctggccaaa
ctgaggccacctacccctccagtgccagacgtctgtccattcctgctctcagacagctgc
cattctcttcatccgatggagcatgaattttatgaggacaatgagtatctttccagcttg
cctgctgatgtagacagagcagaggactttgaatatgaggaggtcgagctgtgtcgtgtt
agcagtcaagagaagctgggcctgacagtctgttaccgaacggatgatgaagaagacacg
ggcatttatgtcagcgaggtagatccaaatagcattgctgccaaagatggccgaattcga
gaaggggatcggattttacaaataaatggggaagatgtccagaatcgagaagaagcagtg
gcattgctgtctagcgatgagtgcaagagaatcgtgctgctcgttgcaaggccagagatt
cagctggatgaaggctggttggaagatgaaaggaatgaattcttagaggagttaaacttg
gagatgctggaagaacagcataatgaagcaatgcagtgcactgccaatgaggtggagcag
cccaaaaaacaggaagaagaggaaggcaccacggacacggccacatcctcctccaacaac
catgagaaggacagtggggtggggcgcacggatgaaagcctgcggaatgatgagagctcg
gagcaggagaacgcagctgaggatcccaagggcgcatccttgaggagcacgagagggctg
gggcagagccaggacaccctaggaagcgtggaacttcagtgcaatgagagcttggtgtct
ggcgactacatggactccgactgcgtgggccacgcagaggaagagtgtgaaaggttccga
cagctcctggagctcaagtgcaagattcgaaaccacggagagtatgacctgtattactcg
agcagcacaatagaatgccaccaagggatgggcgtggagcacgagctccagctgcttaac
gaagaactgcgcagcattgagctcgagtgccaaaatatcatgcaggctcacaggctccag
aaagtgacagaccagtatggagacatctgggccttgcacgacggaggcttccggaattat
aacaccagcgtggatgtgccgaggggaaaactagatgacatcctcgaacacccggaaaag
tcggacaaggacagttccagtgcttacaacacggcggagagctgcagaagcaccccgctc
accgtggaccggtcccccgacagttcccttccacgagtgatcaacctcaccaataagaaa
aacctgagaagcacagcaggggccagtcggccttcttcgggagccagcagcaaggagtcg
acctccagcagagccaacacggcagaacaaggctgcagcagcgtggaggccaaggagaag
gcgtccgagagctgcagcaggctttccgaccaggacaggcccagcggtgagcagcgcatc
ccttacctgtctccctatcacagctcctcctacaggtgtgcaaacatcccagcgcatgcc
cggcattatcaaagctacatgcagttgattcagcagaaatctgccgtcgagtatgcccag
agtcagctgagcctcgtgagtatgtgcaaggagccccagaagggctcggagcccaagatg
gaatggaaggtgaaaatccgcagcgacgggacgcggtacataacgaagaggccagtgcga
gaccggattctgcgggaacgtgccttaaagatcaaggaggagcgcagtggcatgaccacg
gacgacgacaccatgagcgagatgaagatgggccgctactggagcagggaggagaggaag
cagcacctggttcgggccaaagagcagcgtcggcgccgggagttcatgatgcggagccgc
ttggagtgtctcaaggagagtccccagagtggcagcgagggcaagaaagagctcagcatc
cttgaactgagccacaagaagatgatgaaaaaaagaaacaagaaaatcttggacaactgg
atgacaatccaagaactgatgacccacggggccaagtctccggatggcacacgagttcat
aatgcctttttgtcagtcaccaccgtatga
DBGET
integrated database retrieval system
