Vulpes lagopus (Arctic fox): 121480057
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Entry
121480057 CDS
T07435
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121480057 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vlg04040
]
121480057 (SCN8A)
Ion channels [BR:
vlg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121480057 (SCN8A)
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Lustrin_cystein
HB_ELP1
SieB
Motif
Other DBs
NCBI-GeneID:
121480057
NCBI-ProteinID:
XP_041592265
LinkDB
All DBs
Position
21:42430649..42553364
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AA seq
1980 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKAEGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWEEYINNKTNFYIVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGAGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKGFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIG
GRLLPEATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSILSVVTNTLVEELEESQRKCP
PCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQ
FEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLADVEGL
SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKS
YKECVCKINQDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMV
MVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWAKLKVHAFMQ
AHLKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSGIGSSVEKYIID
EDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIK
PEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCFLIVEHNWF
ETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFF
TNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNAL
VGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFDIEDVNNKTECEKLM
EGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYM
YIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKP
QKPIPRPLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLV
FVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIR
LARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEA
GIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS
VGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDAT
QFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSG
ELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLARRGFICKKT
TSNKLENGGTHREKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKEVRESKC
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgcttgcaccaccaggccccgatagtttcaagcctttcacccctgag
tcactggcaaacatcgagaggcgcattgctgagagcaagctcaagaaaccgccaaaggcc
gaaggcagtcatcgggaagacgatgaggatagcaagcccaagccaaacagtgacctggaa
gcagggaagagtttgcctttcatctatggggacatcccacaaggcctggttgcagttccc
ctggaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctcctgaatggtcgaagaat
gtggagtacacattcacagggatttatacatttgaatcactagtgaaaatcattgcaaga
ggtttctgcatagatggctttacctttttacgggatccatggaactggctagatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagaccatt
gtgggtgccctaatccagtcggtgaagaagctgtcagatgtgatgattctgacagtgttc
tgcttgagtgtctttgccttgatcggactgcagctgttcatgggcaacctgcgaaacaag
tgtgtcgtgtggcccataaacttcaacgagagctatctggaaaatggcaccaaaggcttt
gactgggaagagtatatcaacaataaaacaaatttttacatagttcctggcatgctggaa
cctttactctgtgggaacagttctgatgctgggcaatgcccagagggataccagtgtatg
aaagcaggaaggaaccccaactacggttacacgagctttgacactttcagctgggccttc
ttggcattatttcgccttatgacccaggactactgggaaaacctgtatcagttgacctta
cgagcagctgggaaaacatacatgatcttcttcgtcttggtcatctttgtgggttctttc
tatctcgtgaacttgatcttggctgtggtggccatggcttatgaagagcaaaatcaggca
acactggaagaggcagagcaaaaagaggctgaattcaaagcaatgttggagcaacttaag
aagcaacaggaagaggcacaggctgctgcaatggccacctccgcaggcactgtttcagaa
gatgccatcgaggaagaaggcgaagaaggggcaggctctcctcgcagttcctctgaaata
tctaaactcagttccaagagtgctaaagaaagacgtaaccggagaaagaagaggaagcag
aaggagctctctgaaggagaggaaaaaggggatcctgagaaggtgtttaagtcagagtca
gaagatggtatgagaaggaagggctttcgactgccagacaacagaatagggaggaaattt
tccatcatgaatcagtctctgctcagcatcccgggctccccgttcctctcccgccacaac
agcaaaagcagcatcttcagcttccgggggcccgggcggttccgcgacccgggctcggag
aacgagttcgccgacgacgagcacagcaccgtggaggagagcgagggccgccgggactcg
ctcttcatccccatccgggcccgcgagcgccgcagcagctacagcggctacagcggctac
agccagggcagccgctcgtcgcgcatcttccccagcctgcggcgcagtgtcaagcgcaac
agcacggtggactgcaacggcgtggtgtccctcatcggtggccctggctcccacatcggc
gggcggctcctgccagaggctacaactgaggtggaaattaagaagaaaggccctggatct
ctcttagtttccatggaccaactggcctcatatgggcggaaggacagaatcaacagtata
ttgagtgttgttacaaacacactagtagaagagctggaagagtcacagagaaagtgcccg
ccatgctggtataaatttgccaatactttcctcatctgggagtgtcacccgtactggata
aaactgaaagagatcgtgaacttgatcgttatggacccttttgtggacttggccatcacc
atctgcattgtcctgaataccctgtttatggccatggagcaccatcccatgacaccacaa
tttgaacacgtcttggctgtaggaaatctggttttcactggaattttcacagcggaaatg
ttcctgaagctcatagccatggatccctactattatttccaagaaggttggaacattttt
gacggatttattgtctccctcagtttaatggaactgggtctagcagacgtggaggggctt
tcggtgctgcgatctttccgattgctccgagtcttcaaattggccaaatcctggcccacc
ctgaacatgctgatcaagattattggaaattcagtgggtgccttgggcaacctgaccctg
gtgctggccattattgtcttcatctttgctgtggtggggatgcaactctttggaaaaagc
tacaaagaatgtgtctgcaaaatcaaccaggactgtgaactccctcgctggcacatgaat
gactttttccattccttcctcattgtctttcgagtgttgtgtggggagtggatcgagacc
atgtgggactgcatggaggtggcaggccaggccatgtgcctcattgtcttcatgatggtc
atggttattggcaacttggtggtgctgaacctgtttctggccttgctcctaagctccttc
agcgcagacaatctggcagcaacagacgatgatggggaaatgaacaaccttcaaatctca
gtaatccggatcaagaagggggtggcttgggccaaactgaaagtgcacgccttcatgcag
gcccacttgaagcagcgtgaggccgatgaagtgaagcctctggatgagctatatgaaaag
aaggccaactgcatcgccaaccacactggtgcagacatccaccggaatggtgacttccag
aagaatggcaatggcacaaccagtggcattggcagcagcgtggagaagtatatcattgat
gaggaccacatgtccttcatcaacaatcccaacttgaccgtgcgggtgcccattgctgta
ggcgagtctgattttgagaatcttaacacagaggatgttagcagcgagtcggatcctgaa
ggcagcaaagataaactggatgatactagctcctctgaaggaagcaccatcgacatcaaa
cctgaagtagaagaagtcccggtggaacagcccgaggaatacttggatccagatgcctgc
ttcacagaaggttgtgtccagcgattcaagtgctgccaggtcaacatcgaagaagggcta
ggcaagtcttggtggatcctgaggaagacctgcttcctcatcgtggagcacaattggttt
gagaccttcatcattttcatgattctgctcagcagtggtgccctggccttcgaggacatc
tacattgagcagagaaagaccattcgcaccatcctggaatacgctgacaaagtcttcacc
tacatcttcatcctggagatgttgctcaagtggacagcctatggcttcgtcaagttcttc
accaatgcctggtgctggctggacttcctcattgtggctgtctctttagtcagccttata
gctaatgccctgggctactcggaactaggtgccataaagtcccttaggaccctaagagct
ttgagacccttaagagccttatcacgatttgaagggatgagggtggtggtgaatgccttg
gtgggcgccatcccctccatcatgaatgtgctgctggtgtgtctcatcttctggctgatt
ttcagcatcatgggagttaacctgtttgcgggaaagtatcactactgctttaatgagact
tctgaaatccgatttgatattgaagatgtcaacaataaaactgagtgtgaaaagctcatg
gaggggaacaacacagaaatcaggtggaagaacgtgaagatcaactttgacaacgttggg
gcaggatatctggcacttcttcaagtggcaaccttcaaaggctggatggacatcatgtat
gcagctgtagattcccgcaagcctgatgagcagcctaagtatgaggacaacatctacatg
tacatctactttgtcatcttcatcatcttcggctccttctttaccctgaacctgttcatt
ggtgtcatcattgataacttcaatcaacaaaagaaaaagtttggaggtcaggacatcttc
atgaccgaagaacagaagaagtactacaatgccatgaaaaagctgggctcaaagaaaccg
cagaaacccattccccgccccctgaacaaaatccaaggaatcatctttgattttgtcact
caacaagcctttgatattgttatcatgatgctcatctgccttaacatggtgacaatgatg
gtggagacagacacgcagagcaaacagatggaaaacattctctactggattaacctggtc
ttcgtcatctttttcacctgtgagtgtgtgctcaaaatgtttgccttgaggcactactac
ttcaccattggctggaacatctttgacttcgtggtagtcatcctctccattgtgggaatg
ttcctggctgatataattgagaaatactttgtttccccaaccctattccgagtcatccga
ttggcccgtattgggcgcatcttgcgtctgatcaaaggcgccaaagggattcgtaccctg
ctctttgccttaatgatgtccttgcctgctctgttcaacattggccttctgctcttcctg
gtcatgttcatcttctccatctttgggatgtccaatttcgcatacgtgaagcacgaggct
ggcatagatgacatgttcaactttgagacatttggcaacagcatgatctgcctgtttcag
atcacaacctcggctggttgggatgggctgctgctgcccatcctaaaccgcccccctgac
tgcagtctggataaggaacacccagggagtggcttcaagggagactgtgggaacccctca
gtgggcatcttcttctttgtaagctacatcatcatctccttcctaatcgtcgtgaacatg
tacatcgccatcatcttggagaacttcagtgtagccacagaggaaagtgcagaccctctg
agtgaggacgactttgagaccttctatgagatctgggagaagtttgaccccgatgccacc
cagttcatcgagtactgtaagctggcagactttgcagatgccttggagcaccctctccga
gtgcccaagcccaacaccatcgagctcattgccatggatctgccaatggtcagcggggat
cgcatccactgcttggacatcctttttgcctttaccaagcgggtcctgggagatagcggg
gagttggacatcctccggcagcagatggaggagcggttcgtggcatccaatccttccaaa
gtgtcttacgagccaatcacgaccacgctgcggcgcaagcaggaggaggtgtcggctgtg
gtcctacagcgcgcctaccggggacacttagcgaggcggggcttcatttgcaaaaagacc
acgtccaataagctggagaacggaggcacacaccgggagaaaaaagagagcaccccgtcc
acagcctccctcccgtcctatgacagtgtaactaaacccgagaaggagaaacagcaacgg
gcagaggaaggaagaagggaaagggccaaaagacaaaaagaggtcagagaatccaagtgt
tag
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integrated database retrieval system
