Vulpes lagopus (Arctic fox): 121480165
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Entry
121480165 CDS
T07435
Symbol
CALCOCO1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121480165 (CALCOCO1)
04131 Membrane trafficking [BR:
vlg04131
]
121480165 (CALCOCO1)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
121480165 (CALCOCO1)
Membrane trafficking [BR:
vlg04131
]
Autophagy
ER-phagy
ER-phagy recepters
121480165 (CALCOCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
ACBP4_C
CC4_CEP85
Vps23_core
Crescentin
Fez1
Pox_A8
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
121480165
NCBI-ProteinID:
XP_041592431
LinkDB
All DBs
Position
21:complement(44177233..44194482)
Genome browser
AA seq
690 aa
AA seq
DB search
MEESSLSRAPSRGGVNFLNVARTYIPNTKVECHYTLPPGTVPSASDWIGIFKVEAACVRD
YHTFVWSSVPESAADGSPVHASVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFRE
PRPMDELVTLEETDGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEGQVTELRNQ
VQDLEMALATARQEHAELREQYKGLSRSHGELIEERDVLSRQQGDHVARILELEDDIQTI
SEKVLTKEVELDRVRDTVKALTREQEKLLGQLKEVQADKEQSEAELQMAQQENHRLNLEL
QEAKGRQEEQGAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGAQELAASSQQKAA
LLGEELASAAGARDRTMAELHRSRLEVAGVSGRLAELSLHLKEEKSQWSKERAGLLQSVE
AEKDKILKLSAEILRLEKAVQEEKTQNQVFKTELAREKDSSLVQLSESKRELTELRSALR
VLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWSEGTATEDEEAAAGLSCPEALTDSE
DESPEDMRPPSYGLCERGDSGSPSGPREASGRVVVSQPAPVAPQLSGAAEDTSSDSEAED
EKSVLMAAVQSGGEEANLLLPELGSAFYDMASGFAVGPLSEASTGGPATPPWRECPICKE
RFPAESDKDALEDHMDGHFFFSTQDPFTFE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcatcactaagccgggcaccttcccgaggtggagtcaactttttgaatgta
gcacggacctacatccccaacaccaaggtggaatgtcactatacccttcccccaggcacc
gtgcccagtgccagcgactggattggcatcttcaaggtggaggctgcctgtgttcgggat
taccacacgtttgtctggtcttcagtgccggagagtgcagctgacgggtctcctgtccac
gccagtgtccagttccaagccagttacctgcccaaacccggagcccagctctaccagttc
cggtacgtgaaccgccagggccgggtgtgtgggcagagtccccctttccagttccgagag
ccaaggcccatggatgagctggtgaccctggaggagaccgatggaggctctgacatcctg
ctggttgtccccaaggccactgtgctgcagaaccagctggacgagagccagcaagagagg
aatgacctgatgcagctgaagctgcagctagagggacaggtgacggagctgaggaatcaa
gtacaggatctcgagatggctctggcgactgccaggcaggagcacgcggagctcagggag
cagtacaaggggctctcccggtcccacggggagctcatagaagagagggacgtcctgagc
cgacaacagggagaccatgtggcacgcatcctggagctggaagatgacatccagaccatc
agtgagaaagtgctgacaaaggaggtggagttggacagggtgagggacacggtgaaggcc
ctaacgcgggaacaagagaagctcctcgggcaactgaaagaagtgcaagcagacaaggag
caaagtgaggctgagctccagatggcacaacaagaaaaccatcgcttaaatttggagctg
caggaagcaaagggccggcaggaggaacagggtgctcaggcccagcggctgaaggacaag
gtggcccagatgaaggacaccctaggccaggcccagcagcgtgtggctgagctggagccc
ctgaaggagcaacttcgaggagcccaggagcttgcagcctcgagtcagcagaaagccgcc
ctccttggggaggagctggccagcgcagcgggagccagggaccgcaccatggccgagctc
caccgcagccgcctcgaggtggctggagtcagtggccggctggctgagctcagcctgcat
ctgaaggaggaaaaaagccagtggagcaaggagcgggccgggctgctgcagagcgtggag
gcagagaaagacaaaatcctgaagctgagcgcggagatacttcgactggaaaaggcagtt
caggaggagaagacccagaaccaagtgttcaagacagaactggcccgggaaaaggattcc
agcctggtgcagttgtcagagagcaagcgggaactgacggagctgcggtcagccctgcgc
gtgctccagaaggaaaaggagcagctgcaggaggagaagcaggagctgcttgagtacatg
aggaagctggaggcccgcctggagaaggtggcggacgagaagtggagcgagggcaccgcc
acagaggatgaggaggcggctgcagggctgagctgcccagaggctctgacggactcggag
gatgagtccccggaggacatgcggcccccctcctacggcctctgcgagcgcggggacagc
ggctccccctcggggccgcgagaggcttcaggccgggtcgtggtcagccagccggctccg
gtggcgccgcagctctcgggggccgccgaggacaccagctctgactcggaggccgaagat
gagaagtcagtcctcatggcagctgttcagagtggcggtgaggaggccaatctgctgctt
cctgagctgggcagtgccttctatgacatggccagtggcttcgcagtgggtcccttgtca
gaggccagcactgggggccccgccacccccccgtggagggagtgccctatttgtaaggag
cgcttcccagccgagagtgataaggacgccctggaggaccacatggatggacacttcttt
ttcagcacccaggacccctttacctttgagtga
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integrated database retrieval system
