Vulpes lagopus (Arctic fox): 121480611
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Entry
121480611 CDS
T07435
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121480611 (SMARCAL1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121480611 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
W02B3_4_N
Motif
Other DBs
NCBI-GeneID:
121480611
NCBI-ProteinID:
XP_041593231
LinkDB
All DBs
Position
22:23478712..23542422
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AA seq
961 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQSSGSGSCIATSSSQSRQGLPPNLPGD
PSKPVNHGVIFMQQNLSSSSSDGQRPHHCHSFHLSAPEQTERTWKRQEDVPAACPSHSSS
GQMILTGISPPLAQSPPEVPDQQLLGCALGQGHLQASHEARSTPFANPTPESLAKAKSFQ
KTPASAFGQPPSDPGLEAKAVRPSTSGQNIAGVHCGSGSVTPRTEGRLSQKLGAAATHKA
VSSQRGTCIRSGDRFQVKIGYNEELIAVFKSLPSRSYDPATKTWNFSMTDYGALMKAAQR
LPTVTLQPLEGAGHSRESPSAGGTAQTCLPSAPSLAFVKGQCVLISRARFEADIGYSEAL
VALFKQMDSRSYDVKTRKWNFLLEEHNKLIQRVRCLPQVQLDPLPKTLTLAFASQLEKTS
PCLTQPIPEADLSGVDPKLVSSLLPFQRAGVNFAIAKRGRLLLADDMGLGKTIQAICIAA
YYQKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPERINVVVTGKDRLTAGLVNIVSFDLLS
KLEKQLKTPFKVVIIDESHFLKNIKTARCRAAMPLLKVAKRVILLSGTPAMSRPAELYTQ
IIGVRPTFFPQFHAFGLRYCDAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKCDVLAQ
LPPKQRKMVIIVPGRISTRARAALDAAAKEMTTMDKTKQQQKEALLLFFNRTAEAKIPSV
IEYILDLLESGREKFLVFAHHKIVLSAVTRELEKKHVPHIHIDGSTSSADREDLCQQFQL
FEKHAVAVLSITAANMGLTFTSADLVVFAELFWNPGVLLQAEDRVHRIGQSSSVSIHYLV
AKGTADDYLWPLIQEKIRVLGEAGLSETNFSEMTEATNYFYKDPKQQQIYDLFQQSFEED
GSDLELLEAAESSDPRSASGAPGNDSQDLGDTPDGTMVTGSPVKKRRFEFFDNFDSFTFP
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctcttacagaggagcagaggaaaaaaattgaagagaaccggcaaaaggct
ctggcccgtagagctgagaaattattagcagaacagcatcagagctcaggctctggctcc
tgcattgccaccagctcttcccagtccagacagggcctgcccccaaatctccccggggat
ccttctaagccagtgaaccatggtgtcattttcatgcagcagaatctcagtagttcatct
agtgatggccaaagacctcatcattgccacagttttcacctgagtgctccagagcagaca
gagaggacctggaagaggcaagaagatgtgcccgcagcctgcccgagccacagctcatca
ggtcaaatgattctcacgggcatctctcctcccttggcgcaaagccctccagaggtcccc
gatcaacaactcttgggttgtgccttaggtcaaggtcatcttcaggcttcccacgaggcc
agatccacaccctttgctaacccaactcctgagtctttggccaaagccaagagtttccag
aagacaccagcttctgcctttggacagccacccagtgatcccgggttggaggccaaggca
gtgaggccctccacgtcggggcagaacattgctggtgtccactgtggctcagggagtgtg
acacccaggacggaaggaagactctcacagaaattgggggccgcggccacccacaaagca
gtaagctcccagaggggaacgtgcataaggagtggggatcgtttccaggtgaagatcggg
tacaatgaagagctcattgcggtttttaagagcctacccagcagaagttatgatcctgcc
accaagacgtggaacttcagcatgacggactatggtgccctgatgaaagcagcccagagg
ctccccacggtcaccctgcagcctttggaaggggccgggcacagcagggagtcaccctcc
gcaggtggcacggcccagacctgcctgccttcagctccctccctggcctttgtcaaaggg
caatgcgtgctcatctcccgggcccgctttgaggcagacatcggctactctgaagctctg
gttgcactatttaagcagatggattccagaagttacgatgtcaagacgaggaaatggaac
tttctcttggaagagcacaataaactaatccagagggtgcgctgccttccacaagttcag
ctggatcctctgcccaagaccctcaccctggcgttcgcgtcacagctagagaagacgtct
ccctgcctcacacaacccatccccgaggctgacctttctggagtggaccccaagctcgtg
tccagtctgctgcccttccagagagcaggagtcaattttgcaatagcgaagagaggccgc
ctgctgcttgctgacgacatgggcctggggaagaccatccaagccatctgcattgcggcc
tattaccagaaggagtggccgctcctggtggtggtaccatcatctgtgcgcttcacctgg
gagcaggccttccttcggtggctgccatctctgagcccggagcgcatcaatgtcgtggtg
accggcaaggaccgcctgacagctggcttggtcaacattgtcagttttgaccttctgagc
aagttagaaaaacagctaaaaaccccttttaaagttgtcatcatcgatgagtctcacttc
ctcaagaatataaagactgcccgctgccgcgcagccatgcccctcctcaaggttgcgaag
agagtgatcctgctgtccggcacaccagccatgtcccggcccgcagagctctacacccag
atcatcggggtcaggccaactttcttccctcagtttcatgcttttggacttcgctactgt
gatgccaagcggcagccctggggatgggactattcgggctcctccaacctgggcgagctg
aagctcctcctggaggaagcggtcatgctgcgacgcctcaagtgtgatgtcctcgctcag
ctcccacccaagcagcgcaagatggtcatcattgtccccggccggatcagcaccagggcc
agagccgccctggacgccgcggccaaggaaatgaccaccatggacaaaactaaacagcag
cagaaagaagctctccttctcttcttcaacagaacagctgaagctaaaatcccatctgtc
attgaatatatcctggacctcctggaaagtggaagagagaagtttctggtgttcgcgcac
cataagatagtcctgagtgcagttacaagagagcttgagaaaaagcacgtgccacacatc
cacatcgacggctccacctcctcggcggaccgagaggacctgtgccagcagttccagctg
ttcgagaagcacgctgtggccgtgctgtccatcaccgctgccaacatgggcctcaccttc
acctcggctgacctggtggtgtttgctgagctcttttggaatccaggggtgctgcttcag
gctgaggaccgggtgcaccgaatcggacagtcgagctctgtgagcatccactacctcgtg
gcgaaaggcacagctgatgactacctctggcccctaattcaagagaagattagagttctg
ggtgaagccggactttctgagaccaatttttcagaaatgacagaagctactaattacttc
tacaaggacccaaagcagcagcagatctatgacctcttccagcagtccttcgaggaagac
ggaagcgacctggagctcctggaggccgcggaatcctctgaccccagaagtgcttcgggt
gcgcctggaaatgattcccaggacctgggagacacgccggacgggaccatggtgaccggc
agccccgtgaagaaaaggagatttgagttttttgataactttgacagctttacctttccc
ctgtaa
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