Vulpes lagopus (Arctic fox): 121480644
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Entry
121480644 CDS
T07435
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121480644 (PMS1)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121480644 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
MRP-L46
Motif
Other DBs
NCBI-GeneID:
121480644
NCBI-ProteinID:
XP_041593295
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Position
22:403929..513719
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AA seq
930 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELLENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAIDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDNFSTQ
YVLDGSGHIISQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYG
ILKPELRIVFIHNKAVIWQKTRVSDRQVALRAVLGTAVMGNMEPFQYHPEDSQIYLSGFL
PKHDVDHSSMSLSTPERSFIFINNRPVHQKDILKLIRHYYNLKCLKETSRLYPIFFLKID
VPTADVDVNITPDKSQVLIQNKEAVLIALENLMTTCYGSLPSTNSYENNKTDVSSADVVV
SNTTETDVLFNKMESSGNNYPNVDTSAIPFQNDVCNDKSGKNTNYCLNNQINVDDHCDDH
FKSENSNIDKNTRSIFQEIPMNNLSCEDAQKECSETCFVVSVKHTQSENVNKSNRDENRK
NEEGAVPEKPLKISADDWSKGNTLKNSMGENIEPVKILVPQESSACKQNNNTYPSPELKN
LSESSCSKKSNVVDNKSGQLTAYDLISSRVVKKPMSASALFVQDHRAQFLTENSKTSLED
ATVQIEELWKTLSEEEKLKYEEKATKDLERYNRQIKRAIEQESQISLKDGRKKIKPTSAW
NLAQKHKLKTSLSNQPKLDELFQSHIEKKTQNIKVVQIPFSMENLKKNLKKHKFDLEDKE
ELCLIHNLKFPDAWLITSKTEVMLLNPYRVEEALLFKRLIENHKLPAQPLEKPIILTESL
FNGSHYLEMLCKMTTDDQRYSGSTYLSDPRLTANGFKIKWIPGVSIAEDYLEIEEMANCL
PFYGVTDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDVQDIIY
RMKDQFGHEIKGCVHGRPFFHHLTHLPEAT
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgcagcaacagtgcgcctcctttcaagctctcagataatcacttca
gtggtcagtgtggtaaaagagctccttgaaaactctttggatgcaggtgccacaagcata
gatgttaaactggagaactatggatttgataaaattgaggtacgagacaatggtgagggt
atcaaggccattgatgcacctgtaatggcagtaaaatactatacttcaaaaataaatagt
catgaagatcttgaaaatttaacaacttatggttttcgtggagaagccttgggatcaatt
tgttgtgtagctgaggttttaataactacaagaactgcttctgataattttagcacccag
tatgttttagatggtagtggccacataatttctcagaaaccttcacatcttggtcaaggt
acaactgtaactgttttaaaattgtttaagaatctacctgtaagaaagcagttctattca
actgctaaaaaatgtaaagatgaaataaaaaaggtccaggatctcctcataagctatggt
atacttaaacctgagttaaggattgtgtttatacataacaaggcagttatctggcagaag
actagagtatccgatcgtcaggtggctctccgggctgttctggggaccgccgtgatgggc
aacatggaaccgtttcagtaccaccctgaagactcacagatttatctaagtggatttctt
ccaaagcatgatgtagaccactcttcaatgagtctgtcaaccccagaaaggagttttatc
tttataaacaatcgaccagtacatcaaaaagacatattaaagctaatccgacattattac
aatctgaagtgcctaaaggaaaccagtcgtttgtatcccattttctttctgaaaattgat
gttcctacagctgatgtggatgtaaatataacaccagataaaagtcaagtgttaatacag
aataaggaagctgttttaattgctcttgaaaatctgatgacgacttgttatggatcacta
cctagtacaaattcttatgaaaataataaaacagatgtttcctcagctgacgtggttgtt
agtaatacaacagaaacagatgtgctttttaataagatggaatcatctggaaataattat
ccaaatgttgatacttcagccattcctttccaaaatgatgtgtgtaatgataaatctggg
aaaaacactaattattgtttaaataatcagataaatgttgatgaccattgtgatgatcat
tttaagagtgaaaattctaacattgataagaacactagaagtatatttcaagagatccca
atgaataatttatcatgtgaggatgcccaaaaggaatgtagtgaaacttgttttgtagtt
tctgttaagcatacccaatcagaaaatgtcaataaaagcaatagagatgagaataggaaa
aatgaggaaggagcagttcctgagaagcctttgaaaatctctgcagatgactggagcaag
ggaaatacacttaaaaattcaatgggagaaaacattgaacctgtgaaaattttagtgcct
caagaaagttcagcgtgtaaacaaaataataatacttatccaagtcctgaactaaagaat
ctcagtgaaagttcctgtagcaaaaaatcaaatgtggtagataacaaatctggacagctt
acagcatatgatttaatcagcagtcgagtagtcaagaaacccatgtcagcaagcgccctt
tttgttcaagatcatcgtgctcagtttctcacagaaaattctaagaccagtttggaggat
gcaacagtacaaattgaagaactgtggaagacattgagtgaagaggaaaaactgaaatat
gaagaaaaggctactaaagatttggaacgatacaataggcaaatcaagagagccattgaa
caggagtcacaaatatcattaaaagatggcagaaaaaagataaagcccaccagtgcatgg
aatttggcacagaagcacaagttgaaaacttcattgtctaatcagccaaaacttgatgag
ctctttcaatcccatattgaaaaaaaaactcaaaacattaaagtagttcagatccctttt
tctatggaaaacttaaaaaaaaatttaaaaaaacataaatttgacttagaagataaggaa
gaactttgcttgatccacaatctcaagtttcctgatgcgtggctaattacatccaaaaca
gaggtgatgttattaaatccttacagagtggaagaagccctgctatttaaaagacttatt
gagaatcataaacttcctgcacagcccctggaaaagccaattatattaacagagagtctt
tttaatggatctcattatttagagatgttatgtaaaatgaccacagatgatcagagatat
agtggatcgacttacctgtccgatcctcgtcttacagcaaacggtttcaagataaaatgg
ataccaggtgtttccattgctgaagactacttggaaatagaagaaatggctaattgcctc
ccattctatggagtgacggacttaaaagaaattcttaatgctatattaaacaaaaatgca
aaagaagtttatgaatgtagacctcgaaaagtgataagttatttagagggagaagcagtg
cgtctgtctagacagttgcctatgtacttatccaaagaggacgtccaagacattatctat
agaatgaaggaccaatttggacatgaaattaaagggtgtgttcacggtcgcccatttttt
catcatttaacacatcttccagaagctacctga
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