Vulpes lagopus (Arctic fox): 121481214
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Entry
121481214 CDS
T07435
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121481214 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121481214 (CHD8)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121481214 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121481214
NCBI-ProteinID:
XP_041594322
LinkDB
All DBs
Position
23:45810741..45872742
Genome browser
AA seq
2591 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGDVGN
SSASDLVPPPDETAPTELPKESTAPAPESLTLHDYTTQPVSQEQPAQPVLQTPTPTSGLL
QVSKSQEILSQGNPFMGVSATAVSSSSAGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPAS
QPQPPPPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPLKVVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASSAPHTGGKIGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKNSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKTEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHT
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KGFIWDLISPAENGKTKELQNHSVFNVSPFPGLSIPVPRGRKGKKVKSQSTFDIHKADWI
RKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWF
PVVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEH
RVLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQ
QPGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARR
EKQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVA
MCRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLAL
CQPPGPELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGA
PAPSLSRCSTPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVA
RSRPTPQDYEMRVAPSDTTPLVSRNVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSS
SSTDESEDEKEEKLSADRSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRA
SEWPKDRVLINRIDLVCQAVLSGKWPSSRRSQEMVTGGILGPGNHLLDSPSLTPGEYGDS
PVPTPRSSSAASMAEEEVSAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLM
ANGVMGDGHPLFHKKKGNRKKLVELEVQCMEEPNHLDVDLETRIPVINKVDGTLLVGEDA
PRRAELEMWLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPAQTANSRN
GKKGHHAETVFNRVLPGPIAPDSGKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSS
SGLQSVSSLGHSSATSASLPFVPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGL
RATGYPSSPATTTSGTALRLPPLQPEEDEDDEDEDDDDDLSQGYDSSERDFSLIDDPMMP
ANSDSSDDADD
NT seq
7776 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctg
actgatgacagcttcaaccaggtcacacaagaccccattgaggaagcccttggactgcca
agctctctggactccttggatcagatgaaccaggatggtggaggtggtgatgtggggaat
tcatcagcaagtgacctggtccccccaccagacgagacagcccccacagaacttcccaaa
gaatcaacagctccagctccagaatctttaactttgcatgattataccactcagcccgtc
agccaggagcagccagcccaacctgtcttacagacaccgacgccaacatcaggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtctcctccagtagtgctggagggcaaccacctcagtcagcccctaagatcgtt
atccttaaggccccaccaagctcctcagtcactggtgcccatgtggcacaaattcaggcc
caaggtatcaccagcacagctcagcccctagtggctggcacagccaatggtggaaaagtt
acttttaccaaagtgctaaccggcactccccttcgaccaggtgtttccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctactgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctacagccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacc
cagggtgaatcgaaacgcatcaccctggtcctccagcagccacagtctggaggtccccaa
ggacaccggcatgtcgtactagggagtctaccaggcaagatagtgttacagggcaaccag
ctggcagccctgactcaagccaagaatgctcaggggcagcctgccaaagtagtaactatc
cagctgcaggtgcaacagccacagcagaaaatccagattgtaccacagccgccagcatcg
cagccgcagccgccaccaccaccctcaacccaaccagtgactctctcctctgtgcagcaa
gctcagataatgggaccaggacaaagcccaggacaaagactttcggtaccactcaaggtg
gtgctgcagccacaggctggctcttcccaaggggcctcttctgggctctccgtagtgaaa
gttctaagtgccagtgaagtggcagctctgtcttcaccagcaagctctgctcctcacacg
gggggcaagataggaatggaggagaaccgcaggctagagcaccagaagaagcaagagaaa
gccaatcggattgtagcagaagctattgctagggcccgtgcccggggtgagcagaacata
cctcgagtcctaaatgaggatgaactacctagtgttcggcctgaggaagaaggtgagaag
aaacgcaggaagaagaacagtggggagaggctcaaggaagaaaagccaaagaagagcaaa
acatctggtacctccaaaactaaaggaaaaagtaagctgaataccatcacccctgtggtg
ggtaagaagagaaagcgtaatacctcatctgataattcagatgtagaagtcatgcctgcc
cagtcaccccgggaagatgaagaaagcagcattcagaaaagacgctcaaaccgccaagtt
aagcgaaaaaaatatacagaggatctggatataaagatcacagatgatgaagaagaagaa
gaagtggatgtaactggtccaataaaaactgagcctatcctccctgaaccagtgcaggaa
ccagatggcgagactctgccttccatgcagttctttgtggagaatcccagtgaagaagat
gcagccatagtagacaaagtgctttctatgcggattgtgaagaaggagcttccttctgga
cagtatactgaggcagaagaattctttgtcaagtacaagaactactcctatctacactgt
gaatgggccaccatctcccaactagagaaggataaaaggatccatcagaaactaaagcgc
ttcaaaaccaaaatggctcagatgagacacttcttccacgaggatgaagagcccttcaat
ccagactatgtagaggtagataggatattggatgagtctcacagtattgacaaggacaat
ggagagcctgtgatttactacctggtgaaatggtgctctctgccctacgaggatagtacg
tgggagctgaaagaggatgttgatgagggcaagattcgagaatttaaacggatccagtca
aggcacccagaactcaaaagagtgaatcgtccacaggcaagtgcctggaagaagttggag
ctgtcacatgagtataaaaacagaaaccagttacgggaatatcagttggaaggggtcaac
tggctgctctttaattggtataacaggcagaactgtatcctggctgatgagatgggactg
ggcaaaactatccagtccattgccttcttgcaggaggtatataatgtgggcatccatggc
cccttcctggtcattgccccactgtccacaattactaactgggagcgagaattcaataca
tggacagaaatgaacactattgtataccatggcagtctggcaagccgtcagatgattcag
caatatgaaatgtactgcaaagattcacgggggcgcctcatcccaggcgcatacaagttt
gatgccctgatcaccacttttgagatgattttgtcagactgtcctgagcttcgtgagatt
gaatggcggtgtgtcatcattgatgaggcccatcgactaaagaaccgtaattgcaagctg
cttgatagcctcaagcacatggacctggaacataaagtgctactcacgggaacgccattg
caaaatactgtggaggaactgttcagcttgcttcatttcttggaaccatcacagtttcct
tcagagtcagaattcctcaaggactttggagatctcaagacagaggaacaggttcaaaag
ctacaggccattctcaagccaatgatgctaagaagacttaaagaggatgttgaaaaaaac
ctagcccccaaacaggaaactatcattgaagtagagttgaccaacatccagaagaaatat
tatcgggctattttggagaagaatttctccttcctttccaaaggagcaggtcatactaac
atgcctaatctactcaatacaatgatggagttgcgcaagtgctgcaaccacccttacctc
atcaatggtgcagaagaaaaaatcctaacagaatttcgagaagcttgccatattatacct
catgacttccacttgcaggccatggttcgttcagctggcaaattggttcttattgacaag
ttgctcccgaaacttaaagctggtggccataaagttctgatcttctcccagatggtacgc
tgcctagatatcctagaggattatctaatccagaggaggtacctatatgagcgaattgat
gggcgagtcagaggtaaccttcgacaggcagctattgaccgcttcagcaagcctgactca
gaccgctttgtcttcttgctgtgcacccgggctggtggactcggtattaatctcacagct
gctgatacctgcatcatctttgattcagactggaatccacaaaatgacctgcaggcccag
gcacggtgtcatcgaattgggcagagcaaagctgtgaaggtgtatcgtctcatcactcgt
aattcttacgagagagagatgtttgataaggctagcctcaagttgggattggataaagct
gtgcttcagtccatgagtggtcgggatggcaacattactggaatccaacagttctccaag
aaggagattgaagatctcttacgaaaaggagcatatgcagccataatggaagaagatgat
gagggctccaagttttgtgaagaagacattgaccagatcttgttaagacgaaccacaacc
atcaccattgaatctgaaggaaagggttcaactttcgccaaggcaagctttgttgcttct
gaaaataggactgatatttctctggatgaccccaacttttggcaaaagtgggccaagaag
gctgacctagacatggatctacttaatagcaagaataacttggtgattgacacacctaga
gtacgaaaacagacccgccacttcagcactctgaaagatgatgacctagtggaattctct
gatttggaaagtgaagatgatgagcggccacggtctcgccgacatgaccgtcatcataca
tatgggcgcactgactgttttcgggtggaaaagcacctcttggtatatggctggggacgg
tggcgagatatcttgtctcatggacgtttcaagcgacgtatgactgaacgagatgtggag
acaatttgccgggccatccttgtatattgtcttctgcactatcgtggggatgaaaatatc
aaaggcttcatttgggacttgattagccccgctgaaaatggcaagacgaaagaattgcag
aatcattcagtcttcaatgtctcccctttcccaggtctttctatccctgtgccccgtgga
cgcaaggggaaaaaagtaaagtcacaaagcacttttgatatccataaggcagattggatc
cggaaatataatcctgatactctgtttcaagatgagagttacaaaaagcatttaaaacat
cagtgtaacaaggtgctcttgcgggtacgaatgctatattatctgaggcaggaggttatt
ggagaccaggcagagaaggtgttagggggtgccattgccagtgagattgacatatggttc
ccagtagtggatcagctagaggttccaacaacatggtgggacagtgaggctgacaagtcc
ctgctcattggagtctttaagcatggctatgagaaatacaatactatgagggcagaccca
gccttatgcttcctggaaaaggccggtcgaccagatgacaaagccattgcagcagaacat
cgagtgttggataatttctctgacatagtggaaggggttgattttgataaggattgtgaa
gaccctgaatataaaccactccagggtcctccaaaggaccaagatgatgagggtgatccc
ttgatgatgatggatgaggagatctcagtgattgatggagatgaagcccaggtaacccag
cagccaggccatctcttctggcctccaggctctgctctgacagctaggcttcggcgccta
gtaacagcttatcaacgcagctacaagagagaacagatgaagatagaggctgcagaacga
ggggaccggagacggcggcgttgtgaggcagccttcaagctaaaagaaattgcacggcgg
gagaaacagcaacgatggacaaggcgtgaacaaactgatttctatcgcgtagtatctacc
tttggtgtggagtatgaccctgataccatgcagttccactgggatcgcttccgtactttt
gcccgactggacaaaaaaacggatgaaagccttaccaagtacttccatggctttgtggcc
atgtgtcgccaagtgtgccgccttcccccagcagctggagatgagcccccagaccctaat
ctgttcattgagcccatcactgaggagagggcctcacggactctctaccgtattgaattg
cttcggcgcttacgggaacaagttttatgccatccccttctggaagaccggttagcgtta
tgtcagcctccaggtcctgaattgcccaaatggtgggagcccgttcggcatgatggggag
cttctacgaggggcagcccgccacggggtgagccaaacagactgcaacatcatgcaggac
ccagacttctcttttctggctgcccgtatgaattacatgcagaaccatcaggcaggagca
ccagctccatccctgtcacgctgctctacgccactgctacaccagcagtatacctcgcgc
actgcctcaccactgcccctgcgcccagatgctcctgttgaaaagccacctgaggagaca
gctgcccaggtccccagtctggagagtctgactttaaaactagagcatgaggtggtggcc
aggagccgaccaaccccacaagactatgagatgcgagtagccccctctgatactacccct
ctggtttcccggaatgttccaccagtcaaactggaggatgaggatgattcagactctgag
ctggacttgagcaagctgtcaccatcatcctcttcttcctcatcctcatccagctccagc
tccagcactgatgagagtgaggacgagaaggaagaaaagctaagtgctgaccggtcccgc
tcaaagctctatgatgaagagagtcttctgtccctcactatgtcccaagatggattccca
aatgaagatggagaacaaatgacccctgagcttttgctgctacaagaaagacaaagagct
tctgagtggcccaaggatcgtgtccttataaaccgtattgacctcgtctgccaggctgta
ctctcagggaagtggccttctagccgccgaagccaggaaatggtgacaggaggaattttg
gggccaggcaaccacttgctagatagtccctcattgactccaggagaatatggtgactct
ccagtccccacaccacgaagtagcagcgcagcttccatggcagaggaggaagtgtctgca
gtcaccacagcagcagctcagttcacaaaacttcgcagaggcatggatgaaaaggagttt
acagttcagatcaaagatgaggaaggactgaagttaacattccagaagcacaagttgatg
gctaatggagtaatgggagatggacatcctttgtttcataagaagaagggaaacagaaag
aagctagttgagctggaggtgcagtgcatggaagagcctaatcaccttgacgtggacctg
gagacccggatccctgtcatcaataaggtggatggtactttgctggtgggtgaggatgcc
cctcgccgggctgaactggagatgtggttacagggtcatccagagttcgctgtcgatccc
cgatttctagcgtatatggaggatcgcagaaaacagaagtggcagagatgtaaaaaaaat
aataaggcggaactgaactgtttgggaatggaaccagcacagacggctaactctaggaat
gggaagaagggtcaccatgctgaaactgtgttcaaccgggttttgccagggcctattgca
ccagacagcggcaagaagcgggcccgtaggatgcgaccagacctttcaaagatgatggcc
ctgatgcagggcggaggcactgggtccctctctctgcataataccttccaacacagcagt
agtggcctgcagtctgtgtcttccctgggccacagcagtgccacttctgcatctttgcct
tttgtgccgtttgtgatgggtggtgcagcatcatcccctcatgtagactccagcaccatg
cttcatcaccaccaccaccacccccacccccaccatcaccaccatcaccatccaggcctg
agagccactggctacccttcttcaccagccactaccacctctggtactgccttgaggttg
ccaccactgcaacctgaggaggatgaggacgatgaggatgaagatgatgatgatgattta
tctcagggctatgatagctcagaaagggacttctcactcattgatgatcctatgatgcca
gccaactcagactcaagcgacgatgctgatgactga
DBGET
integrated database retrieval system
