Vulpes lagopus (Arctic fox): 121481379
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Entry
121481379 CDS
T07435
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121481379 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121481379 (SMARCA5)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121481379 (SMARCA5)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
121481379 (SMARCA5)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
121481379 (SMARCA5)
RSF complex
121481379 (SMARCA5)
WICH complex
121481379 (SMARCA5)
B-WICH complex
121481379 (SMARCA5)
NORC complex
121481379 (SMARCA5)
BRF complex
121481379 (SMARCA5)
NuRF complex (fruit fly)
121481379 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
121481379
NCBI-ProteinID:
XP_041594613
LinkDB
All DBs
Position
23:complement(21480155..21521264)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAAEPPPPPPPESAPSKPAAPAASSMSNSSNKGGPEGVAAQATPSAASSGPADSEMEE
VFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggcggagcctccgccacccccgcctcccgagagcgcgccttccaagcct
gcagccccggccgccagcagcatgagcaacagcagcaacaaaggcggcccggagggcgtc
gcggcccaggcgaccccctctgcggctagctccggccccgcggactccgagatggaggaa
gtatttgatgatgcatctcctggaaagcagaaagaaattcaagaaccagatcctacctat
gaagaaaaaatgcaaactgatcgagcaaatagatttgagtatttattaaagcagacagag
ctgtttgcacatttcatccagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccagggcgcccacgaataaaaaaggatgagaaacaaaacttgctatcagttggcgac
tacagacatcgtagaacagagcaagaggaagatgaagaactattaacagaaagctctaaa
gcaaccaatgtttgcactcgatttgaagactctccatcatatgtaaaatggggtaaactg
agagattatcaggtccgaggattaaattggctcatttccttgtatgagaatggcatcaat
ggtatccttgcagatgaaatgggcctgggaaaaactcttcaaacaatttctcttcttggg
tacatgaaacactatagaaacattcctggtcctcatatggttttggttcctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgtttg
ataggagataaagaacaaagagctgcctttgtgagagatgtattattgccaggagaatgg
gatgtatgtgtaacatcttatgaaatgcttataaaagagaaatctgttttcaaaaaattt
aattggcggtacttagttatagatgaagctcacagaatcaaaaatgaaaaatccaagttg
tcagaaatagtgagggaattcaagactacaaatcgactgttattaactggaacacctctt
caaaacaacctgcatgagctctggtcacttcttaattttttgttgccagatgtctttaat
tcagcagatgactttgattcatggtttgatacaaataattgccttggggatcaaaagcta
gttgagaggcttcatatggttttgcggccatttctccttcgtcgaattaaagctgatgtt
gaaaagagtttgcctccaaagaaggaagtaaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatactcggatattaatgaaggatatagatatattaaactctgcagggaag
atggacaaaatgaggttattgaacatcctgatgcagttgaggaaatgctgtaatcatcca
tatctctttgatggagctgaacctggtccaccttatacaactgatatgcatctagtgacc
aacagtggcaagatggtggtgttggacaagctgctccctaaattaaaagaacaaggttca
cgagtactaatcttcagtcagatgacaagggtattggacattttggaggattactgcatg
tggagaaattatgaatactgtcgattggatgggcaaacaccccatgatgagagacaagag
tccatcaatgcatacaatgaaccaaacagcacaaagtttgttttcatgttaagtacacgt
gccggtggtcttggcattaatcttgctactgctgatgtggtaattttgtatgattcagat
tggaatccccaagtagatctccaggctatggaccgagcacatagaattggacaaactaag
acagtcagagtgttccgcttcataactgataacactgtggaagaaagaatagtggaacgt
gctgagatgaaactcagactggattcaatagtcattcaacaaggaagacttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgattagacatggggcaacacat
gtgtttgcttcaaaagaaagtgagattactgatgaggatattgatggtatcttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaaaatgggtgaaagctcactt
agaaactttacgatggatacagagtcgagtgtttataactttgaaggagaggattataga
gaaaaacaaaagattgcattcacagagtggattgaaccacctaaacgagaaagaaaagcc
aactatgctgtcgatgcctattttagggaagctcttcgtgtcagcgaacctaaagcaccc
aaggctcctcggcctccaaaacaacctaatgttcaggatttccagttctttcctccacgt
ttatttgaattattggaaaaagaaattctgtattacagaaaaacaattgggtacaaggtg
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaagaagaacagcttaaaatt
gatgaagctgaaccccttaatgacgaagagttagaggaaaaagagaaacttctaacacag
ggatttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaagtgg
ggtcgtgatgatattgaaaatatagcaagagaagtagaagggaaaactccagaagaagtt
attgaatactcagctgtattctgggaaagatgcaatgaactccaggacatagagaagatt
atggctcagatcgaaaggggagaggcaagaattcaaagaagaattagtattaaaaaagca
cttgacacgaagattggacggtacaaagcaccttttcatcagctgagaatatcatatggt
actaacaaaggaaaaaactatactgaagaagaggatcgttttctaatctgtatgcttcac
aaacttggatttgacaaagaaaatgtttatgatgaattacgacagtgtattcgcaactct
cctcagttcagatttgactggtttcttaagtctagaactgcaatggagctccagaggagg
tgtaataccttaattaccttgattgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaagagaggaccaaaaccttcaacacagaaacgtaaaatggatggagca
cctgatggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
