Vulpes lagopus (Arctic fox): 121481877
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Entry
121481877 CDS
T07435
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03008
Ribosome biogenesis in eukaryotes
vlg03013
Nucleocytoplasmic transport
vlg03015
mRNA surveillance pathway
vlg05014
Amyotrophic lateral sclerosis
vlg05164
Influenza A
vlg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121481877
03015 mRNA surveillance pathway
121481877
03008 Ribosome biogenesis in eukaryotes
121481877
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121481877
05168 Herpes simplex virus 1 infection
121481877
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121481877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121481877
03009 Ribosome biogenesis [BR:
vlg03009
]
121481877
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121481877
mRNA cycle factors
Stress granule specific factors
121481877
Ribosome biogenesis [BR:
vlg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121481877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
Motif
Other DBs
NCBI-GeneID:
121481877
NCBI-ProteinID:
XP_041595412
LinkDB
All DBs
Position
24:32051277..32119848
Genome browser
AA seq
1016 aa
AA seq
DB search
MPAICPEESDTARTFRGAHSIIQKDKKYRSEEYNDGGSSSQGRKKVWSSFQGNFDKRNSH
YECGGFELQPSPLQEDNENVSMGDVQEDPQVRHTPYSTRRNKRRVKWHNEGHIHITVWRD
RKNLKREVEENTQDGISGSWFKITIPYGRKYDKAWLXNSIQRHCSVPFVPVDFHYIKNQA
RFFVQDVCTASALKDVSYNIFDEENRKLSIFVNPSSVPYSVRYKLEPEEMEQLKLTMNKC
CDVSQQALDLQSLRFDPDLVGHDIDVILNXRNCMAATLQIIEENFPELLSLNLSNNKLYG
LDGLSDIIERAPRVKILNLSKIELNLVWELNKMKGLNLEELWLEGNPLCDTFPDKSTYIS
AIRDCFPKLLCLDGQDLTPPDIIDTDIPYSIQPSKESYKGSEELKNPVLQFLQQYYLIYD
SGNQQGLLGAYHDEACFSLAISFKPKDPVPSNLCKYFKENRNMKNLKHFSLCVQLLKHIK
YDILCSLYMLPKTXHDLSSFMVDMWFQMEKMICFSVSGVFKEVEGKSQSFICAFTRXFIA
TPVSDSTLCIMNDELFVRDATPNEIQSVFSKQEPTLTSSSMVTLSQEQQEMVQAFSTQSG
MKLEWSQKCLQENEWNYTRAGQIFTVFKPMPMAMSGKRGLTDQEAKVTFQARHDVHHFLA
DFAKWSYRLDAKADDDGEAMERRCLGPDDASWMTANLCPEVLAKSLEPPPSERFSAGVSG
SASCLRGVAGPQQGGRGLPLAGCSPKNTQPFGNPVVISPQLKEDKFSPRSCLQETNPRLR
SVPWQTGIKVVNGMKVANQELFGWGGYPRSPCKRDLGQTSALENSKIRHSRCFYSTKFAV
ICCSPGGEGARDPQLSANPGKSRMPPAVPPGQACTCAEKTRRKAKVLAPSLSSVLSFAPS
IYPTQVGRPRANTAFPVSLATGGPGQVGGLSNAAVEVQPRALLPPRRRCEVCSAEVERTL
RTTLDLSSPRSFRPWPAAAGPPSVSRHFPMSGAHDCQPLTHDCQPLTPGFSVIALA
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatctgtcctgaggaatctgatactgcccggactttcaggggtgcccacagc
atcatacagaaagataaaaaatacagaagtgaagaatacaatgatgggggtagctcatct
caaggaagaaagaaagtttggagttctttccaaggtaattttgacaaaaggaactctcat
tatgaatgtggtggatttgagctgcagccttcacccctccaggaggataatgaaaatgtg
tcgatgggggatgtccaggaggacccccaagtaagacacactccttatagcacccgacgc
aacaagaggagagtgaaatggcataatgaaggccatatccatattactgtgtggagagat
agaaaaaatctgaagagagaagtagaagagaacacacaagatggaatctcagggagctgg
ttcaagatcaccattccctatgggagaaagtatgacaaggcatggctanagaattcaatc
cagagacactgcagtgtccccttcgttccagtggatttccactacattaaaaaccaggcc
cggttctttgtccaggatgtttgcactgcctctgcattgaaggatgtaagctacaatatt
tttgacgaggagaaccggaagttatctatctttgtcaatccctcaagtgtaccctactct
gtgcggtacaagttggagccagaagaaatggaacagctaaagctgaccatgaacaaatgc
tgtgatgtctcccagcaagctcttgatctccagagtctccgctttgacccagatttggtg
ggccatgatattgatgtaatcctgaattgaagaaactgcatggctgccaccctacagatc
attgaagagaatttccctgagctattgtctttgaacttgagcaacaacaaactgtatggg
ctggatggcctgtctgacattatagagagggcccccagagtcaagattctgaacctctcc
aaaattgagctgaacttggtgtgggagttaaacaagatgaaagggctgaatcttgaagag
ctttggctagaaggaaaccccttgtgtgacacctttccagacaagtccacctacataagt
gccatcagggattgttttcccaagctgttatgcctggatggccaggacttaaccccacca
gatatcattgatactgacattccatattcaatacagccctccaaggaaagctacaaagga
tctgaggaactgaaaaatccagtcttgcaattcctacagcagtactacttgatctatgac
tctggaaaccagcagggtctcctcggtgcctaccatgatgaagcctgcttctccctggcc
atttccttcaagcccaaagacccagtgccaagcaacttgtgcaagtacttcaaggaaaac
aggaatatgaagaatctcaagcacttctccctgtgtgttcagctgctgaagcatataaaa
tatgacatcctgtgctccctctatatgcttcccaaaacatagcatgacctcagctccttc
atggtggacatgtggttccagatggagaagatgatctgcttctctgtcagtggggtgttc
aaggaagtggaaggaaagtctcagagtttcatttgtgccttcacccganacttcatcgct
acccctgtcagtgattccactctgtgcatcatgaatgatgagctgtttgtgagagatgcc
acccccaatgagattcagagtgtgttttccaaacaagagcctacactgacctccagctcc
atggtcaccctctcccaggagcagcaggaaatggtacaggctttctccactcaatctggg
atgaaactcgagtggtctcagaagtgcctacaggaaaatgagtggaactacaccagagct
ggtcagatcttcactgtgttcaagcctatgcccatggccatgagtgggaaaagaggcctg
actgaccaagaagccaaagttacgttccaggccagacatgatgtgcaccacttcctggct
gactttgcaaagtggagctacaggctggacgctaaagctgacgatgatggtgaagccatg
gaaagaagatgcctgggtccggatgacgcttcctggatgacagccaacctctgcccagag
gtacttgctaagagtctagagcctccccccagtgagcgcttctctgctggtgtcagcggc
tccgcgagctgcctccgaggcgtagcaggcccacagcaaggaggccgagggctgcccctc
gccggctgctcaccgaagaacacgcagcccttcggcaaccccgtggttattagtcctcaa
ctaaaggaagacaaatttagtcccaggagttgtttgcaggaaacgaacccgcgactacgt
tctgttccgtggcaaacgggaattaaggttgtcaatggaatgaaggtcgccaaccaagag
ctcttcggatggggaggttacccccggtcaccctgcaagcgagacctaggccagacctct
gctctagagaactctaagataagacactcgcgttgtttttactccaccaagttcgcagtg
atctgctgcagcccgggcggagaaggggctcgggacccgcagttgtctgctaacccgggg
aagagccgcatgccccctgcagtgccaccagggcaggcttgtacctgcgcagagaaaacc
agaagaaaagcaaaggtgctcgctccctcactttcaagtgtcctgtctttcgcccccagc
atttatcccactcaggtcggaaggccacgagcaaacactgcatttcccgtttctttggca
acgggaggcccgggccaggtgggtggactcagtaacgccgcggtggaggtccagccacgg
gctttgctcccacccaggcggcgctgcgaggtctgcagtgcagaggtggagaggacccta
aggaccaccctagacctctctagtcctcggtccttcaggccttggccagcggctgctggg
ccgccttctgtctcccgccacttcccaatgtcgggagcccacgattgccagcccctcacc
cacgattgccagcccctcacccccgggttttcagtcattgctttagcttga
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