Vulpes lagopus (Arctic fox): 121481971
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Entry
121481971 CDS
T07435
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03022
Basal transcription factors
vlg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121481971 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
121481971 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121481971 (ERCC3)
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121481971 (ERCC3)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121481971 (ERCC3)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121481971 (ERCC3)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121481971 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
121481971
NCBI-ProteinID:
XP_041595622
LinkDB
All DBs
Position
24:3113704..3146950
Genome browser
AA seq
779 aa
AA seq
DB search
MGKRDRDKKKAKKRHYEDEEEDEDDVPGNDSQEAVPSAAGKQVDESGTKVDEYGAKDYRL
QMPLKDDHASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSL
YAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESSHPD
VIQHLLQDPVIRECRLRNSEGEATELITETFMSKSAIAKTAEGSGGPSTSRVTDPQGKSD
IPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEA
ERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEDEELAFSTREEQQQLLQKVLAATDLD
AEEEVVAGEFGSKSSQVSRRFGTMSSMSGADDTVYMEYHSARSKASTKHVHPLFKRFRK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagagagaccgcgataagaagaaggccaagaagcggcactacgaggacgaggag
gaggatgaggacgacgtccccgggaacgactctcaggaggcggtgccctcggcggccggg
aagcaggtggatgagtccggcaccaaagtggacgaatacggagccaaggactacaggctg
cagatgcccctgaaggacgaccacgcctcgaggcctctctgggtggctcctgatggccac
atcttcttggaagccttctctccagtttacaaatacgctcaagacttcctggtggcgatt
gcagaaccagtgtgccgaccaacccatgtgcatgagtacaaattaacggcctactccctg
tatgcagctgtcagtgttgggttgcagactagtgacatcactgagtacctcaggaagctc
agcaagacgggtgtccctgatggaattattcagtttattaagttgtgtactgtcagctat
ggaaaagtcaagctggtcctgaagcacaacaggtactttgttgaaagctcccaccccgat
gtcatccagcatcttctacaggatccagtgatccgggaatgccgcctgcggaactctgag
ggggaggctaccgagctcatcacagagaccttcatgagcaagtctgctattgctaagact
gctgaaggcagtggtgggccttctacttcccgggtgacagacccacagggtaaatctgac
atccccacggacctgtttgacttttatgaacaaatggacaaggatgaagaagaagaggaa
gagacccagacagtatcttttgaagtcaagcaggaaatgattgaggaactccagaaacgt
tgcatccacttggagtatcctctgttggcagaatatgacttccggaatgattctgttaac
cccgatatcaacattgacttgaaacccacagctgtccttagaccttaccaggagaagagc
ttgcggaagatgtttgggaacggacgtgcccgttcaggggtcattgtccttccttgtggt
gctgggaagtccctggttggcgtgacagctgcatgcactgtgagaaaacgctgtctggtg
ctgggcaactctgctgtgtctgtggaacagtggaaagcccagttcaagatgtggtccacc
atcgacgacagccagatctgccgtttcacctctgatgccaaggacaagcccataggctgc
tccattgccattagcacctactccatgctgggccacaccaccaaaaggtcctgggaggct
gagcgtgtcatggagtggctcaaaactcaggagtggggcctcatgatcctggatgaagta
cacaccataccagccaagatgttccgccgggtgctcaccatcgtgcaggcccactgcaag
ctgggtttgactgcaaccctagtccgggaggatgacaaaatcgtcgatttaaattttctg
attgggcccaagctctacgaagccaactggatggagctgcaaaacaatggctacatcgcc
aaagtgcagtgcgctgaggtttggtgcccaatgtctcctgagttttaccgggagtatgtg
gcaatcaaaaccaagaaacgaatcttgctgtacaccatgaaccctaacaaattcagagct
tgccagtttctgatcaagtttcacgaaaggaggaatgacaagattattgtctttgcagac
aacgtgtttgccctgaaggaatatgccattagactgaacaaaccctatatctatggtcct
acatcccaaggagagaggatgcagattctccagaatttcaagcataaccccaaaatcaac
accatcttcatatccaaggtgggcgacacatcgtttgatctgccagaagcaaatgttctc
attcagatctcatctcacggtggctcccggcggcaggaagcccaaaggctggggcgagtg
ctccgagccaaaaaagggatggttgctgaggagtataatgccttcttctactcgttggta
tcccaggacacacaggaaatggcttactcaaccaagcggcagagattcttggtagatcag
ggttatagctttaaggtgatcacaaagctggcgggcatggaggacgaagagctggcattc
tccacgagggaagagcagcagcagctcttgcagaaggtcctcgcggccactgacttggat
gctgaggaagaggtggtggcaggggagtttggctccaaatccagccaggtgtctcggcgt
tttggcacaatgagctccatgtctggagctgatgacaccgtgtacatggagtaccactcg
gcacggagcaaggcttccacgaagcatgtgcatccgcttttcaaacgcttccggaaatga
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integrated database retrieval system
