Vulpes lagopus (Arctic fox): 121482240
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Entry
121482240 CDS
T07435
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04110
Cell cycle
vlg04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121482240 (SMC1A)
04114 Oocyte meiosis
121482240 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121482240 (SMC1A)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121482240 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
121482240 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
121482240
NCBI-ProteinID:
XP_041595999
LinkDB
All DBs
Position
X:complement(45261755..45306097)
Genome browser
AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaagtcgtacaagggtcggcagatt
atcggaccgtttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgcaatcagctttgtgttgggtgagaaaaccagcaacctgcgagtaaagacc
ctgagggacctgatccacggagcacctgtgggcaagccagctgccaaccgggcctttgtc
agcatggtctactctgaggagggtgctgaggaccgcacctttgctcgtgtcattgttggg
ggttcctctgagtacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaagttgggcattctcatcaaagctcgtaacttcctcgtcttccagggtgctgta
gaatctattgccatgaagaaccccaaagagaggacagctctatttgaagagatcagtcgc
tctggggagttggcccaggaatatgacaagcgaaagaaggaaatggtaaaggctgaagag
gacacacagtttaattaccatcgcaaaaaaaacatcgcggctgaacgcaaggaagccaaa
caggagaaagaagaggctgaccgctaccagcgcctgaaggatgaggtggtgcgagctcag
gtgcagctgcagctctttaagctttatcacaacgaagtggaaattgagaaactcaataag
gaactggcctctaagaacaaggagatcgagaaggacaagaagcgaatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcagcagatt
gagaaggagatcaaggagaaggactcagagctgaaccagaagcggcctcagtatatcaaa
gccaaggagaatacctcccacaaaatcaagaagctggaagcagccaaaaagtccctacag
aatgctcagaagcattacaagaagcgtaaaggtgatatggatgagctggaaaaggagatg
ctgtcagtagagaaagcccggcaggagtttgaggaacggatggaagaggagagtcagagt
cagggcagagacttgaccttggaggagaatcaagtgaagaaataccatcggttgaaagaa
gaagccagcaagagagcagctaccttggcccaggaactagagaagttcaatcgggatcag
aaagctgaccaggaccggctggatttggaagagcggaagaaagtagagacagaggctaag
atcaagcaaaagctgcgggagattgaagagaatcagaaacggattgagaaactagaggaa
tacatcaccactagcaagcagtccctagaggagcagaagaagttagagggggagctgaca
gaggaggtggagatggccaagcggcgtattgatgagatcaacaaagagctgaaccaggtg
atggaacagctgggggatgcccgtatcgaccgccaggagagcagccgccaacagcgaaag
gcagagattatggaaagcatcaagcgcctgtaccctggctctgtgtatggccgcctcatt
gacctctgtcagcctacacaaaagaagtaccagattgctgtaaccaaagttttgggaaag
aacatggatgccattatcgtggactctgagaagacaggtcgggattgcattcagtacatc
aaggaacagcgtggggagcctgagaccttcttgcctcttgactacctggaggtgaaacct
acagatgagaagctccgggaactgaagggggccaagctggtgattgatgtgattcgctat
gagccaccccacatcaaaaaggccctgcagtatgcttgtggcaatgcccttgtctgtgac
aatgtggaagatgctcgtcgcattgcctttggaggccaccagcgtcacaagacagtggca
ctggatgggaccttgttccagaagtcaggggtgatctctggtggggccagtgatttgaag
gccaaggctcggcgatgggatgagaaagcagtagataagttgaaagagaagaaggagcgg
ttgacagaggagctgaaagaacagatgaaggcaaagcggaaggaagcagagctacgtcag
gtgcagtctcaggcccacggactgcagatgcggctcaagtactcacagagtgacctggaa
cagaccaagacacgacatctagccctgaatctgcaggaaaaatccaaactggagagtgag
ctagccaactttgggcctcgcattaatgatatcaagaggatcatccagagccgagagagg
gaaatgaaagacttgaaggagaaaatgaaccaggtagaagatgaggtgtttgaagagttt
tgtcgggagattggtgtgcgcaacatccgggagtttgaggaagagaaggtgaagcggcag
aacgaaattgccaagaagcgtttggaatttgagaatcaaaagactcgcttgggcatccag
ttggattttgaaaagaaccaactgaaagaagaccaggataaagtacacatgtgggagcag
acagtgaaaaaggatgaaaatgagatagaaaagctcaagaaggaggaacaaagacacatg
aagatcatagatgagaccatggcccagctgcaagacctgaagaatcagcacctggccaag
aagtcggaggtgaatgacaagaatcatgagatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccatttacagaaggaggtgacagccattgagaccaagctggaa
cagaaacgcagtgaccgccacaacctgctgcaggcctgcaagatgcaggacatcaagttg
ccactgtctaagggcactatggatgacattagtcaggaagagggtagctctcagggggag
gattcagtgagtggttcccagcgaacttccagcatctatgcacgagaggccctcatcgag
attgactacggtgacctgtgtgaagatctgaaggatgcccaggctgaggaggagatcaaa
caggagatgaatacactgcagcagaagctgaatgagcagcagagtgtactccaacgtatt
gctgcccctaacatgaaagccatggaaaagctggaaagtgtccgagacaagttccaggag
acctcagatgagtttgaggcagcccgaaagcgagccaagaaagccaagcaggcattcgaa
cagatcaagaaggagcgttttgaccgctttaatgcttgctttgaatctgtggccaccaac
attgatgagatctacaaggccctatcccgcaacagcagtgcccaggcattcctgggccct
gagaaccctgaggagccctacctagatggcatcaactacaactgtgtggctcctggcaaa
cgcttccggcctatggacaacttgtcagggggggagaaaacagtggcggctctggctttg
ctctttgccatccacagctacaagccagcccccttcttcgtcctggatgagatcgatgct
gccctggataacaccaacattggcaaggtggcaaattacatcaaggagcagtcgacttgc
aacttccaggccatcgtcatctctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctaccccgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctc
accaagtacccagatgccaaccccaaccccaatgagcagtag
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