Vulpes lagopus (Arctic fox): 121482676
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Entry
121482676 CDS
T07435
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03008
Ribosome biogenesis in eukaryotes
vlg03013
Nucleocytoplasmic transport
vlg03015
mRNA surveillance pathway
vlg05014
Amyotrophic lateral sclerosis
vlg05164
Influenza A
vlg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121482676
03015 mRNA surveillance pathway
121482676
03008 Ribosome biogenesis in eukaryotes
121482676
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121482676
05168 Herpes simplex virus 1 infection
121482676
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121482676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121482676
03009 Ribosome biogenesis [BR:
vlg03009
]
121482676
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121482676
mRNA cycle factors
Stress granule specific factors
121482676
Ribosome biogenesis [BR:
vlg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121482676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tap-RNA_bind
NXF_NTF2
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
121482676
NCBI-ProteinID:
XP_041596426
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All DBs
Position
X:complement(105549798..105574573)
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AA seq
591 aa
AA seq
DB search
MGHNNVGNSLQRRARCWSIYQRRYNNWSEQVSSGIRPSSHQQQDGDPATNGTHMSTRVRY
TPYAIPPCHWRGNFQKQDQVQANMEGEQKPPERKMEGERQDETSGSWFKIIIPFGIKYEE
TWLLNLIQGQCSVPFTPVEFHYEKMQAQFFVENASIAFALKSVNGKIWDENNERVSVFVY
PSDAPHSVQKELISEKVEQTKLTMNKXYVVSQQPLKSQRVPYASGMPTAVILGHLLPLNP
SNNKPYQRDGPSSIMQNASSIKPLNSEVKSTRELDKSKSLQPEEMSANRSSLCTAFPDKS
TNISSILELFPKLLCLDSQESPSPTSIGIAAHKKLPTCKGSFFGSDALKSLILQFLLQYY
LIYDSGDRQGLLSAYHDEACFSLTTPFNPKDPALSSLCEYFKESRNLKKLKDPSLRVQLL
KHTKCDIVRSLCVLPKTQHDLSFFVVDMWFQTGTWGSGSIRAPEAVEWEGRELIRDAGRS
RDVELQSDAAFGAVVTPVWVPAPSCSAPGGLASVPRKAEQVRAPGPVREARAAAVRLLSK
PAHWISAAAFFTLRILGNIRSGPLGWGCGGGQRAAEQLRATGNHPRVPAGK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggggcataataacgtaggtaactccttgcaaagaagagcaagatgctggagtatttac
caaaggagatataacaactggtctgaacaagtcagttctggcattcgtccttcatcccac
cagcagcaagatggagatccagcaacaaatggcactcacatgagcacgcgagtaagatac
actccctatgccattccaccgtgtcattggagaggcaattttcagaaacaagaccaagtc
caagctaacatggagggagagcaaaagcctccagagagaaaaatggagggggagaggcag
gatgagacctcggggagctggttcaagatcataattccattcggcatcaaatatgaagag
acgtggctgctgaatctgattcagggacaatgcagtgtccccttcaccccagttgaattt
cactatgagaaaatgcaggcccagttctttgttgagaatgccagcattgcctttgcattg
aagagtgtcaacgggaagatctgggatgagaataatgaaagggtctctgtctttgtctac
ccctctgacgcaccccactctgtgcagaaggagttgatatcagaaaaggtggagcagaca
aagctgaccatgaacaaatgatacgtagtttcccagcaacctcttaagagccagagagtc
ccctatgcctctggtatgcccacagcagtaattctagggcatcttttgcccttgaaccca
agcaacaacaagccttaccagcgggatggcccatccagcattatgcagaatgcctccagt
atcaagccgttgaacagtgaggtgaaatccacaagggagttggacaagagcaaaagcctg
cagccagaagagatgagtgccaacagaagctccctgtgcaccgcctttcctgataaatca
accaacataagctccatcctggaattgtttcccaagttattatgcctggatagccaggag
tcaccttcaccaaccagcattggtattgcagctcacaagaagttaccaacctgcaaggga
agcttctttggatctgatgcactgaagagtctaatcctgcaattcctactgcagtactac
ttgatctacgactctggagaccgtcagggtctcctcagtgcctaccacgatgaggcctgc
ttctccctgaccactcccttcaaccccaaggacccagccctaagcagcttgtgtgaatac
ttcaaggagagcaggaatttgaagaaacttaaggacccctccctgcgtgttcagctgctg
aagcatacaaagtgtgacatcgtgcgctccctctgtgtgctgcccaaaactcagcatgac
ctcagcttcttcgtggtggacatgtggttccagacggggacgtgggggtcagggtccatt
agagctccagaggcagtggagtgggaggggagagagctcatccgtgacgcggggcgctca
cgtgacgtggagctgcagagcgacgcagccttcggtgcagtcgtcactcccgtctgggta
ccagctcccagctgttctgcgcccggcgggctggcgtcagtcccgaggaaagcggagcag
gtaagggctccggggccggtgcgcgaggccagggcggcggcggtccgcctactttcgaag
ccggctcattggatcagcgcagcagctttcttcaccctccgcattcttgggaacatccgt
agtggccccctggggtgggggtgcgggggcggccagagggcagcagagcaactaagagcg
actggaaatcacccccgagtacctgcaggaaaatag
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