Vulpes lagopus (Arctic fox): 121482864
Help
Entry
121482864 CDS
T07435
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04151
PI3K-Akt signaling pathway
vlg04382
Cornified envelope formation
vlg04510
Focal adhesion
vlg04512
ECM-receptor interaction
vlg04820
Cytoskeleton in muscle cells
vlg04926
Relaxin signaling pathway
vlg04933
AGE-RAGE signaling pathway in diabetic complications
vlg04974
Protein digestion and absorption
vlg05146
Amoebiasis
vlg05165
Human papillomavirus infection
vlg05200
Pathways in cancer
vlg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121482864 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121482864 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121482864 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121482864 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
121482864 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
121482864 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
121482864 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121482864 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
121482864 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
121482864 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
121482864 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121482864 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vlg04147
]
121482864 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
vlg00536
]
121482864 (COL4A5)
Exosome [BR:
vlg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121482864 (COL4A5)
Glycosaminoglycan binding proteins [BR:
vlg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121482864 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121482864
NCBI-ProteinID:
XP_041596790
LinkDB
All DBs
Position
X:81813951..82087413
Genome browser
AA seq
1691 aa
AA seq
DB search
MKLRGVSLAAGWFLLALSLWGQPAEAAACYGCSPGSKCDCSGVKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPTGLPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPTDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGMKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGSTGPPGLVIPRPGTGVTVGEKGN
MGLPGLPGEKGERGFPGIQGPPGLPGPPGTAVMGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGLRGPPGPPGPHISPSDEICETGPPGPPGSPGDRGLQGEQGVKGDKGDT
CFNCIGTGVSGPQGQPGLPGLPGPPGSLGFPGQKGEKGQAGLTGPKGLTGIPGAPGPPGF
PGSKGEPGDVLTFPGMKGDKGELGYPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGPPGLPGIPGNKGEPGIPGIGLPGPPGPKGFPGI
QGPPGAPGTPGRIGLEGPSGPPGFPGPKGEPGLGLPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGLPGRTGLDGLPGPKGDVGPKGQPGTMGPPGLPGIGVQGPPGPPGIPGPVGQPGLHG
IPGEKGDPGPPGFDVLGPPGERGSPGIPGAPGPMGPPGTRGLPGKAGASGFPGAKGEMGM
MGPPGPPGPLGIPGRSGIPGLKGDNGLQGQPGPPGPAGEKGGKGEPGLPGPPGPVDPDLL
GSKGEKGDPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLP
GPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIGLPGLPG
PKGEAGLPGYPGNPGIKGSMGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPTGFQGLPGPEGPRGLPGNGGIKGERGNPGQPGQPGLPGLKGDQGPPGIQGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGDPGLVGPPGPPGLPGPSGQSIIIKGD
VGPPGIPGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT
RGLDGPPGPDGMQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPHGTVQIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMSMSMEPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPHGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggctggttcttactggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatggttgttccccaggatcaaaatgtgactgt
agtggtgtaaaaggagaaaagggggagagaggatttccgggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccgggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcctggttttcct
ggtctacagggtcctccgggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcccactggtttaccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaaaggtgaaaagggtgagcaaggtcttcagggtccccctggtcct
cctgggcagatcagtgaacagaaaagaccaactgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccaggtcct
ccaggtggtatgaaaggtgagaagggtgaacaaggagagcctggcaaaagaggtaaaccg
ggcaaagatggagagaatggccaaccaggaattccaggtttacctggtgatcctggttac
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggctcaactggg
cctcctggacttgtaattcctaggcctgggaccggtgttactgtaggagagaaaggaaac
atggggttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggccttcctggacctccagggactgcagttatgggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggcccacctggaatatctattcctgga
tctcccggacttgatgggcagcctggggctcctggacttcgagggcctcctggccctcct
ggccctcacatctctcctagtgatgagatatgtgaaacaggccctccaggccctcccgga
tctccaggtgatagaggactccaaggagaacaaggagtgaaaggtgacaaaggtgatacc
tgcttcaactgtattggaactggcgtttcagggcctcaaggtcaacctggtctcccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacaagct
ggtctaaccggtcccaaaggattaacaggcataccgggagctccaggtcctccaggcttt
cctggatctaaaggtgaacctggtgacgtcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttaccctggagcccctgggcttcctggtttacctggaacccctggacaa
gatggactgccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggtccccctgggaatccaggcttgccaggtctcccagggaatagggggcctatg
ggccctgtgggttttggccctccaggcccagtaggtgaaaaaggaatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
cagccagggaagcctggcctgcctggtaatccaggcagagatggtgaggtggggcttcca
ggtgaccctggacttcccggcccaccgggcttgccaggaatacccggtaataaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
caaggacctccaggagcacctgggacacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccaaagggagaaccaggacttgggctgcctgggccacctgga
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggagatcgtggtttccca
ggacctccaggtcttcccggacgtactggcttggatgggctccctggaccaaaaggcgat
gttgggccaaagggacaacctgggacaatgggacctcctgggcttccaggaataggtgtt
cagggaccaccaggaccaccagggattcctggaccagtaggtcaacctggcctacacgga
ataccaggagagaagggagatccagggcctcctgggtttgacgttctaggaccccctggt
gagagaggcagtccagggattcctggagcacctggtcctatgggacccccaggaacacga
gggcttccaggaaaagcaggagcctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctcccggccctccaggacctttgggaattcctggcaggagtggtattcctggt
ctaaaaggtgataatggtttgcagggtcagccaggacctcctggccctgcaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccagtggatccagatctgttg
ggctcaaaaggagagaagggggaccctggcttaccaggtattcctggagtttcagggcca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccccggcctccctgggaaaccagggcttcca
ggacctcctgggcttaaaggaagcataggtgatatgggttttccaggtcctcagggtgtg
aaagggtctcctggacctcctggagttcctggacaacctggctccccaggattacctgga
caaaaaggtgaaaaaggtgatcctggtgtttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaagctggtcttcctggatacccaggaaaccctggaatcaaaggttctatg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacaaccaggcctt
cctggattccccggaaccccaggacttcctggaccaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggagggcgtcctgggccacca
gggcctccaggtgaaaaaggcaacccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggactcccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggccttcctggt
ccaaaaggagaaccaggctttcagggtttccctggtgtccagggtcccccaggccctcct
ggctctccaggtccagctctggaaggccctaaaggcaaccctgggcctcagggtcctcct
ggaagaccaggtcctacaggttttcaaggtctaccaggtccagaaggtccccggggtctc
cctggaaatggaggtattaaaggagagagaggaaacccaggccaacctgggcaacctggt
ttgcctggcttgaaaggagatcaaggaccaccaggaatccagggtaatcctggccggcca
ggtctcaatggaatgaaaggagatcctggtctccctggtgttccaggatttccaggtatg
aagggacccagtggagtaccaggttcagctggccctgagggggatccaggacttgttggc
ccaccaggtccccctggactacctggtccttcaggacagagtattataatcaaaggagat
gttggtccaccagggatcccaggccagcctggattaaaaggtctaccaggactaccagga
cctcagggcttaccaggtccaattggccctccaggagatccaggacgcaatggactccct
ggctttgacggcgctggagggcgcaaaggagacccaggtctgccaggccagccaggtacc
cgtggtttggatggtccccctggaccagatggaatgcaaggtcctccaggtcctccagga
acttcctctattgcccatggattcctcatcacacgtcacagccagacaacagatgcacca
caatgcccacatggaactgtccagatttatgaaggcttttctctcttatatgtccaagga
aataaaagagctcacggtcaagacttggggacggctggcagttgccttcgtcgcttcagt
accatgcctttcatgttctgcaacatcaacaatgtttgcaactttgcttcaagaaatgac
tattcttattggctgtctaccccagagcccatgtcaatgagcatggagcccctgaagggc
cagagcatccagccattcattagtcgatgtgcagtatgcgaagctccagctgtggtgatt
gcagttcacagtcagaccatccagattccccattgtcctcacggatgggattctctctgg
attggctattccttcatgatgcacacgagcgcaggagcagagggctcaggtcaagccctg
gcctcccctggttcctgcttggaagagtttcgttcagctcctttcattgaatgtcatggg
aggggtacctgcaactactatgccaactcctacagcttttggctagcaactgtagatgtg
tcagatatgttcagcaaacctcagtcagaaacactgaaagcaggagacttgaggacacgt
attagccgatgtcaagtgtgcatgaagaggacataa
DBGET
integrated database retrieval system
