Vulpes lagopus (Arctic fox): 121483016
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Entry
121483016 CDS
T07435
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121483016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121483016
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
121483016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
121483016
NCBI-ProteinID:
XP_041597169
LinkDB
All DBs
Position
X:complement(24550000..24561307)
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AA seq
784 aa
AA seq
DB search
MQEAVERALDRADYVIASAQQRPPKRKCSSSGAASLYEKLYDIYVEECGKEPEATEELRS
NANLLEKLVRRESLACLVVNLHPGGEGYSLMLEGKQGSCSETIRLPYEEGELLEYLDAEE
LPPALVDLLEQSQVNIFHCGCVIAQVRDYRQCSHGEPAGYQTRHILLHPTMQTLACDVQS
ITSDGQQWTEEEKLLLESQLILATAEPLCLDPSISVACAANRLLYNKQKMNTRPMKRSFK
RYSAPSLTRQQELSQYLPPPELRVLTSFKKSKESKTSENSDFIISKAGYSVDTWKQRPYD
LAVPSEVDVQKYVKWEKFVKYDYSKSTVLPAHEVKDDSVFGYEGGDESQTTKATFMKSLN
DPLISGKRKRRKKVRNERPMSPPHPSTDDHSNNVLPGSKSDTEVVIIQSEVLVHQKAQCP
VTTSSCSSSGSASPSRLPPEKETEQPKILSVQSSVLGKGVRHPSTTIKLPSSSGKNLSGD
SFTPLQGSSFLKSPSPVLASKLPGLSQVSSLEVNPVSIFPVAILSTASSPQRTRATEDIA
DSSGHNIIKVVGPRYGVQALGSGSGPGQGSTSGTTAPLGTKPSSLPSGAQQPQAPSQVGV
QFILKIASNIRPVTVLQLPESSLLXNTQQQPQQQWLYQLIPQQPQQPTTPSQQPTTSCPQ
QPVPQGSSAEGSSGQRAASSAQQDIVLNLPGARSFLQPQAAVVVPLGSVESQETLEQSHP
GQTVXLSPASQPQPKQQAQLRILQGPVAVATAVAQTAQLHPLSEQTANQSKGKMKRSTST
TPES
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggctgtagaacgagctctggaccgtgcagactatgtcatcgcgagtgcccag
cagaggcctcctaaaaggaaatgctcgtcgagtggggcagcatctctgtatgaaaagctt
tatgacatctatgtggaagagtgtgggaaagagcccgaggctacggaggaactgagaagc
aacgcgaacttgttagagaagctggttaggagagagtcgttggcgtgtttagtggtcaac
ctacacccaggaggggagggatattcgctgatgctggaggggaagcagggctcgtgctcg
gagaccattcggctgccttacgaggaaggcgaactgcttgaatacctggatgctgaagag
ttgcctcctgccctggtggatctcctggaacaatctcaggttaacattttccactgtggg
tgtgtcatagcacaggtacgggactacaggcagtgcagccacggggagcctgccggctac
cagaccaggcacattctcctgcaccccacgatgcagactttagcctgtgatgtgcagtcc
ataaccagcgatggccagcagtggactgaggaagagaaactgttgcttgagagccagctg
atcttggctaccgccgaacccctgtgtcttgatccttctatatcagtagcctgcgctgca
aacaggctgctctataacaagcagaagatgaacactcgccctatgaaaaggagcttcaag
aggtattctgcaccctctctgactcgccagcaggagctgtctcaatacctacctcctcct
gagctgagagtattgacttctttcaaaaaaagcaaagagagtaaaacaagtgagaattct
gacttcataatttctaaagcaggttattctgtagatacatggaaacagagaccctatgac
ttggccgtcccttctgaagtggatgtgcagaaatatgtcaaatgggagaagtttgttaaa
tatgattactcaaaatcaacagtcttgccagcccatgaggtaaaagatgattctgtattt
ggatatgaaggtggtgatgagtctcagacaacaaaggcaaccttcatgaagtcgcttaat
gatccacttatctctggaaaaagaaagcgacgtaaaaaagtcagaaatgagagaccgatg
tctcctccacacccttccacagatgaccattcaaataatgtgcttcctggctccaagagt
gatactgaggttgtaatcattcagtcagaggtcttggtccatcagaaggcccagtgtcca
gtcaccacgtcatcatgcagctccagtggatcagccagccccagcagacttcctccagag
aaagaaacagaacagcctaagatcttgtcagttcagtcttcagtcctggggaagggagtc
agacatccatctacaaccatcaaacttccctcgagctcaggaaagaatttgtcaggtgac
agttttactccattgcaaggaagcagctttcttaaatctccatctcctgttcttgcttct
aagctaccaggtctttcccaggtatcatctctggaagtgaatccagttagcatatttcct
gtagcaatcctgtctactgccagctcaccacaaagaaccagggccactgaggacatagcc
gactccagtggccacaacatcatcaaagtggtgggccctcgttatggagtccaggctttg
gggagtggatctggtcctgggcagggctctacctctgggaccacagctcctttgggaacc
aagcccagtagcctgccctcgggagctcagcaaccacaggctccttctcaagtaggtgtt
caatttattttaaaaattgcctcaaatattaggccagtaactgtactccagcttccagaa
agttctctcctttagaacacccagcagcagcctcagcaacagtggctttatcagttgatt
ccacaacaacctcagcaacccactactcctagtcaacagcccacaacttcctgtcctcag
cagccagtgccacagggttcaagtgcagaaggttcatctggtcagagagcagcctcatct
gctcagcaagacattgtccttaacctccctggagcaagaagttttctgcagcctcaggca
gcagtggtggtgcctctaggctctgtggagagccaggaaacattggagcagagccatcct
gggcaaacagtatagctgtcccctgcctcacagccacagcccaagcagcaggcacagttg
agaattttgcagggcccagtggctgtggcaactgcagttgcccagacagctcagctacat
ccacttagtgagcagacagcaaaccagtcaaaaggtaaaatgaagagaagcacatcaact
actccagaatcctag
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