Vulpes lagopus (Arctic fox): 121483197
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Entry
121483197 CDS
T07435
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04659
Th17 cell differentiation
vlg04710
Circadian rhythm
vlg05017
Spinocerebellar ataxia
vlg05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
121483197 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
121483197 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
121483197 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
121483197 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121483197 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
vlg03310
]
121483197 (RORA)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121483197 (RORA)
Nuclear receptors [BR:
vlg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121483197 (RORA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121483197
NCBI-ProteinID:
XP_041597483
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Position
2:55733746..56435942
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AA seq
523 aa
AA seq
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MESAPAAPDPAASEPGSSGADAAAGARETPLNQESARKSEPPAPVRRQSYSSTSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHEDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIESYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggcgcg
gacgcggccgccggcgccagggagaccccgctgaaccaggaatccgcccgcaagagcgag
ccgcccgccccggtgcgcagacagagctattccagcaccagcagaggtatctcagtaacg
aagaagacacatacatctcaaattgaaattattccttgcaagatctgtggagacaaatca
tcaggaatccattatggtgtcattacatgtgaaggctgcaagggctttttcaggagaagt
cagcaaagcaatgccacctactcctgtcctcgtcagaagaactgtttgattgatcgaacc
agtagaaaccgctgccaacactgtcgattacagaaatgccttgccgtagggatgtctcga
gatgctgtaaaatttggccgaatgtcaaaaaagcaaagagacagcttgtacgcagaagta
caaaagcaccggatgcagcagcagcagcgagatcaccaacagcagcctggagaggccgag
ccgctgactcccacctacaacatctcggccaacgggctcaccgagcttcacgaggacctc
agcaactacatcgacgggcacacccccgagggcagcaaggcggactccgccgtcagcagc
ttctacctggacatacagccttccccagaccagtcaggtcttgatatcaatggaatcaaa
ccagaaccaatatgtgactacacaccagcatcaggcttctttccctactgttctttcacc
aatggagagacttccccaactgtgtccatggcagaattagaacaccttgcacagaatata
tctaaatcacatctggaaacttgccaatacttgagagaagagctccagcagataacgtgg
cagacctttctgcaggaggagatagagagctaccaaaacaagcagcgggaggtgatgtgg
caattgtgtgccattaaaattacggaagctatacagtatgtggtggagtttgccaaacgc
attgatggatttatggaactgtgtcaaaatgatcaaattgtgcttctcaaagcaggttct
ctagaggtggtgtttatcagaatgtgccgtgccttcgactctcagaacaacaccgtgtac
tttgatgggaaatatgctagccccgacgtcttcaaatccttgggttgtgaagactttatt
agctttgtatttgaatttggaaagagtttatgttctatgcacctgactgaagatgaaatt
gcattattttccgcatttgtactaatgtcggcagatcgctcgtggctgcaggaaaaggta
aaaattgaaaaactgcaacagaaaattcagctagctcttcaacacgtcctgcagaagaat
caccgagaagatggaatacttacaaagttaatatgcaaggtgtctacattaagagcctta
tgtggacgacatacagaaaagctaatggcatttaaagcaatatacccagacattgtgcga
cttcattttcctccattatacaaggagttgttcacttcagaatttgagccagcaatgcaa
attgatgggtaa
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