Vulpes lagopus (Arctic fox): 121483395
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Entry
121483395 CDS
T07435
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vlg04990
]
121483395 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
vlg04990
]
Other domain-containing proteins
Patched domain-containing proteins
121483395 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
121483395
NCBI-ProteinID:
XP_041597811
LinkDB
All DBs
Position
X:19122696..19173685
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AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHA
AVTRIQVPRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAVQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKSNSKVKMYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTITLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEALQEKPAWYRFLLTARFSEDTTDGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STGLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWLTLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggcttggccacttc
attgccagtcacccggtcttcttcgcctcggcgcccgtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaggagagcgtggagcacctgctggcgccccagcac
agcctcgccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaag
caccgactctactcggacctgcagacccccgggcgctacggccgggtcatcgtcacctcc
ttccagaaagccaacatgctggaccagcatcacaccgacctgatcttaaagttgcatgct
gctgtgaccaggatccaggttccaaggcctggttttaattacacgtttgcccacatatgt
atcctgaataacgataagacttgcatcgtggatgacatagtgcatgttctggaggagcta
aagaatgctcgggccaccaaccggaccaattttgctatcacatacccgatcactcactta
aaggatgggagggcagtgtacaacggacaccagcttggaggcgtcactgtgcacagcaag
gaccgggtaaaatctgcagaggctgtccagctcacctactacctgcagtcaatcaacagt
ctcaatgacatggtggctgagaggtgggagtccagcttctgtgacactgtccgactgttc
cagaaatccaacagcaaagtcaaaatgtacccttacacgtcctcctcactgagggaagat
ttccagaagaccagccgtgtatcggaacgttacctggtcaccagcctgatcctggtggtc
accatggccatcctgtgctgctctatgcaggactgcgtccgcagcaaaccctggctaggc
ctgctcgggttggtgaccataaccctggccactctcaccgcggccgggatcatcaatctt
actggtgggaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ttatatgggacttttgaaatgttatcctcctggaggaaaactagagaagaccaacatgtg
aaagagagaactgcagctgtctatgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcttcttcaactacctctatgtactctcgttt
tatggttccagcctggtattcactggctacatagaaaacaattaccagcatagtatcttc
tgtagaaaagtcccaaagcccgaggcattgcaggagaagccggcatggtacaggtttctc
ctgacagccagattcagcgaggacacaaccgacggcgaggaagcgaacacttacgagagt
cacctattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagttctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaactgcgacgcaaaccattgag
tacactactgcccagcaaaagtactttagtaactacagtccagtgattgggttttacata
tacgagtccatagaatactggaacaccagtgtccaagaagacgtgctagaatacaccaag
gggtttgtgcggatatcctggtttgagagctatttaaattaccttcggaaactcaatgtg
tccactggcttgcccaagaaaaacttcacagacatgttgaggaattccttcctgaaagct
ccccaattttcacattttcaagaggacatcatcttctctaaaaagtacaatgacgaggtt
gacgtagtggcctccagaatgtttttggtggccaagaccatggaaactaacagagaagaa
ctctatgatctcctggagaccctcaggagactttctgtcacctccaaggtgaagttcatt
gtcttcaacccgtccttcgtgtatatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtggcagat
tctctgatcaatgtctggctcactctaacggttgtgtccgtggagtttggcgttataggt
ttcatgacattatggaaagtcgaactggactgcatttctgtgctatgcttaatttacgga
attaactacacaattgacaattgtgctccactgttatccacctttgttctgggcaaggat
ttcacaagaactaaatgggtaaaaaatgctctggaagtgcatggggtagctattttacag
agctacctctgctatattgttggtctgattcctctcgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgacttttctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgcgaggaaattgaatgtgtggaaatggtggatattgatagtacccga
gtggttgaccaaattacaacagtgtga
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