Vulpes lagopus (Arctic fox): 121483636
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Entry
121483636 CDS
T07435
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
KO
K07603
collagen type XVII alpha
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04382
Cornified envelope formation
vlg04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
121483636 (COL17A1)
09158 Development and regeneration
04382 Cornified envelope formation
121483636 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
121483636
NCBI-ProteinID:
XP_041598260
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All DBs
Position
2:24885247..24936283
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AA seq
1480 aa
AA seq
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MDVTKKNKRDGSEVTERIITETVTTRLTSLPPKGGTSNGYAKTGSLSGGSRLEKHSLTHG
SSGYINSSGSTRGNASTSSYRRAHSPASTLPNSPGSTFERKTHITRHGTYEGSSSGNSSP
EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS
SNTLPIPKKGTVETKMVTASSQSVSGTYDATILDANLPSHMWSSTLPAGSSMGTYHNNVT
TQSSSLLNTNAYSAGSVFGVPNNMTSGSSTLHPGVSTCSSVFGMQNNLAPSSSTLSHSTA
TASTAYGMKKNLPQSPAVVSTGVSTSAACTTNVQNEDLLHKDCKFLILEKDNTPAKKEME
LLIMTKDSGKVFTASPASIAATSFSDDTLKKEKQAAYTADTCLVSDANGDVKTVSTKGKA
ASAEMHNYNHRGGGSGGGGGGGGGGGGGPWGAAPAWCPCGSCCSWWKWLLGLLLTWLLLL
GLLFGLIALAEEVRALKARVAELEQSRSNVLLFKEEMQRANKDWLQGEAPSVEAGGKLGL
DGHRQEELWLFVRNRLMAEQENGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIPGVLGHPG
PQGPKGQKGSVGEPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGDRGAAGEPGVQGPPGV
PGSVGPKGSGGSPGPRGPPGPMGPQGLRGEVGLPGIKGDKGPLGSPGPKGDQGEKGPRGL
TGEPGLRGLPGAVGEPGAKGAVGPAGPDGHQGPRGEQGLTGMPGTRGPQGPSGDPGKPGL
TGPQGPQGLPGTPGRPGAKGEPGAPGRIMTSEGSSTITVPGPPGPPGAMGPPGPPGAPGP
VGPAGLPGQQGPRGERGLAGESFMGSSSSISELLSTQGVDLRGPPGPPGPPGPPGEGRPG
PPGPPGSLLSNSETYFSGPPGPPGPPGPKGDQGPPGPRGHQGEQGPPGFSGSGSSSLGLN
LQGPPGPRGPKGDKGDPGVPGMPGRLSQGGSSSSTMFMPGPPGPPGPPGPPGSISSSGRE
IQQYISEYLQSDSIRSYLSGVQGPPGPPGPPGPVTTIAGETFDYSELASRVSSYLQTSGY
SIGSSVSISTEDIVAALQRDDVRQYLRQYVIGDWSLQSLDYAELSSRILSYMSSSGISIG
LPGPPGPPGLPGTSYEELLSLLQGSEYRGIIGPPGPPGPPGIPGNAWSSISVEDLSSYLH
TAGVSSIPGPPGPPGPPGPRGPPGVSGALATYAAENSDSFRSELISYLTSPDVRSFIVGP
PGPPGPQGPPGDSRLVSMDGSYSRDSRSSSHSASVSRGSSYSSSMGIGGASGGSLGEAGA
FGLDMGLGRGYGGAAEGGMYGGEGGPLGAGFAGGLDYNELAVRVSESLQRQGLLQGMAYT
VQGPPGQPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGAIPGPPGQKGEVGIPGPKGERG
PAGPSGRPGPPGPRGHKGEKGDKGDQVYARRRKRSIAIKP
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccaagaaaaacaagagagatggctctgaagtcactgaaagaattatcacg
gagacagtaaccacaagacttacatccttaccaccaaaagggggaaccagcaacggctat
gctaaaacaggctctcttagtggagggagccggctggagaagcacagcctgacacatggc
agcagtggctacataaactcaagtggaagcacacgaggcaatgcctccacctccagttac
aggagggctcattcccctgcctccactctgcccaactcaccaggctccacctttgaaagg
aaaactcacatcacccgccatggaacatacgaagggagctccagtggcaactcttctcca
gagtatcctcggaaggagttcgcatcttcttcaaccagaggaaggagccaaacacgagag
agtgaaatccgagttcgactgcagagtgcgtccccatctacccgatggacggaattggat
gatgttaagcgtttgctcaaagggagccgatcagcaagtgtgagtcccacccggaattcc
tccaacacactacccatccccaagaaaggcacggtggagaccaaaatggtgacggcaagc
tcccagtcggtgtctggcacctatgatgccaccatcttggatgccaaccttccctcccac
atgtggtcttccaccttgccggcagggtcctccatggggacctatcacaacaacgtgaca
acccagagctcatccctcctcaacaccaacgcctattctgcaggatcggtcttcggagtt
ccaaataacatgacgtctggctcttccacactgcaccccggggtcagcacctgctcctca
gtgtttggcatgcagaacaacctggcacccagctcgtccaccctgtcccacagcacggcc
accgcctccacagcgtatggtatgaagaaaaacctgccccagagccctgccgttgtgagc
actggtgtgtccacctctgcagcctgcaccacaaatgtccagaatgaggatctcttgcac
aaggactgtaaattcctgatcctggagaaagacaacacaccggccaagaaggagatggag
ctgctgatcatgaccaaggacagcgggaaggtcttcactgcctcccccgccagcattgct
gcaacttctttttcagatgacaccctcaaaaaagaaaagcaagctgcctacactgctgac
acctgcctggtatcagacgccaatggagacgtgaagactgtgtccacgaagggaaaggct
gcctctgcagaaatgcacaactacaaccatcgtggcggtggcagtggtggtggtggcggt
ggtggcggcggtggcggtggtggcccatggggagcagcgccagcctggtgcccctgtggc
tcctgctgcagctggtggaagtggctgctgggcctgctgctcacctggctgctgctccta
gggctactctttggcctcattgctctggccgaggaggtgagggcactgaaggcacgggtg
gcagagctggagcagagccggagcaacgtgctgcttttcaaggaggagatgcaacgggcc
aacaaggactggctgcagggggaagcacccagcgtggaagcaggcggcaaactagggctt
gatggccaccggcaggaggagctctggctgttcgtgaggaacaggttgatggccgagcaa
gaaaacggaaatctccgaggaagccctggccctaaaggtgacatgggaagtcaaggccct
aaaggagaccgagggctccccgggactccaggcatccctggggtcttgggccacccgggt
ccacaaggaccaaagggacaaaaaggcagtgtgggagaacccggcatggagggacccatg
ggccagagagggcgagaaggtcccatgggacctcgtggtgaaccagggcctcctggattt
ggagagaaaggggacagaggggctgctggtgaacccggtgttcagggcccacctggcgtt
ccaggatctgtgggtcccaaaggttccggcggttctccaggcccacggggtcccccaggc
cctatgggtccacaagggctccgaggtgaagttggactccctggtatcaaaggtgacaaa
ggacctctggggtcaccaggacccaaaggtgaccagggtgagaaaggaccccgaggcctc
acaggtgagccgggcttgagaggcttgcctggtgccgtgggtgagccgggagctaaagga
gcagtaggacctgctggccctgatggacaccaaggcccaagaggtgaacaaggtctaaca
gggatgcctggaacccgtggcccacaagggccttctggagacccaggaaagccaggtctc
acaggaccacaaggacctcagggacttcctggtacccctggccgaccaggagctaaaggt
gaacctggagctccaggcaggatcatgacatcagagggatcatcgacgatcactgtccca
ggcccccccgggcctcctggagccatgggaccgccaggacctccaggtgccccaggtcct
gtgggcccagctggtctccctggacagcaaggcccacgcggcgagcgaggacttgctggc
gaatcgttcatgggcagcagcagctccatctctgagctcctctctacccaaggtgttgat
ttacggggtcccccaggcccacctggaccaccagggcctccaggagaaggccggcctggc
ccgccgggccctccgggatctttgctgagcaactcagagacctacttctctggcccccca
gggccccctggccccccaggccccaagggagaccaaggccccccgggccctcgaggacac
caaggagagcaaggtcccccgggattctcaggctccggctccagttctcttggactcaac
ctgcaaggaccacctggcccccggggacccaagggtgacaaaggtgatcctggggtccct
ggcatgcctggcagactctctcaaggggggtcatcgtcgagcaccatgttcatgccaggt
ccaccaggccctccaggcccaccagggcctccgggctccatcagcagctctggccgggag
atccagcagtacatctctgaatacctgcaaagtgacagcattaggtcttacctctctgga
gttcagggtcccccaggcccccctggtcccccggggcctgtcaccaccattgcgggggag
actttcgactactcagagctggcaagccgcgtcagcagctacttacagacctcagggtac
agcatcggctcctccgtctccatctctactgaggacattgtggctgcgctgcagcgagat
gatgtgaggcagtatctgcgtcagtatgtgattggagattggtcactccagtctttggac
tacgccgagctgagcagtcgcattctcagctacatgtccagttctggaatcagcattggg
ctgcctggccccccaggaccccctggcctcccaggaacatcctacgaggagctcctctcc
ttgctccaggggtctgaatacagaggcatcattgggcccccaggtccccctgggccccca
gggatcccaggcaacgcgtggtccagcatcagcgtggaagacctctcttcttacctgcac
actgcaggtgtgtcatccatccctggccccccaggacctcctggtcccccaggtccccga
gggcctccaggcgtctcaggagctctggcaacctacgcagcggaaaacagcgacagcttc
cggagtgagctgatcagctacctcacaagcccagatgtgcggagcttcatcgtgggcccg
ccagggcctccagggcctcaggggcctcctggggacagccgcctagtgtccatggatggc
tcctacagccgggacagcaggtcctcctctcacagcgcgtccgtcagccggggctcctcc
tacagctcttccatgggcataggaggagccagtggaggctccctcggcgaagcgggggcc
tttggcctggacatgggcctgggccgaggctatgggggagcagcagaaggtggcatgtat
ggtggtgaaggtggaccacttggggctggctttgccggaggtctggactacaacgagctg
gctgttcgggtgtctgagagtttgcagcgtcagggcctgctgcaagggatggcctacacc
gtccagggccccccaggccagccagggccccagggcccccctggcatcagtaaggtcttc
tctgcctacagcaacgtgaccgaggacctcatggactttttccgaacttacggagccatt
ccagggccccctgggcagaaaggagaggtgggcatcccaggacccaaaggtgagaggggc
cccgcaggaccatcaggtcggcctgggccacccggccctcgagggcacaagggagaaaaa
ggagacaaaggtgaccaagtctatgcgaggcggagaaagagaagcatcgccatcaagcca
tga
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