Vulpes lagopus (Arctic fox): 121484090
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Entry
121484090 CDS
T07435
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121484090 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121484090 (ERCC6)
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121484090 (ERCC6)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121484090 (ERCC6)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
121484090 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
121484090
NCBI-ProteinID:
XP_041598725
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All DBs
Position
2:39892299..39963768
Genome browser
AA seq
1485 aa
AA seq
DB search
MQNARISHSSQTQEQDCLLSKTEQSQCVSDKQEMTIKQEDDGNMEVEESLPSCSPANGPS
ASAEGRSSEVPKRGPALLHIDRHQIQTVEPSAQALELQGLGVDVYDQDVLEQGVLRQVDS
AIHEASRAAQLADVEKEYRSVLDDLTSCTTSLRQINKIIEQLSPQAATNRNVNRKLDSVK
RQKYNKEQQLKKITAKQKRLQAILGGVEVQVELDHANLEEEDIEPGPSCLGSMLMPIQET
AWEELIRTGQMTPFGTQIPQKSEKKPRKLMLNEASGFEKYLADQAKLSFERKKQACNKRA
ARKAIASVASELSATVDENKSNEQSKVLSKTDKRLKKHIKKLQKRALHFQGRVGLPKGKK
TLESDMRLKVEGNSEGEESEYLPTEEELEEAEGVKLTGEDKDYELNPMLKRWKRQKKVMV
QENEDDFSPSSGEEAEAACGGRGRKVVRCRDDGDEDYYKQRLRKWNKLRLQDKEKCLKLE
DDSEESDAEFDDFKMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIA
FLAGLSYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSST
QKKEKLIRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQ
FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV
KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDSKE
VYRILNGDMQIFSGLVALRKICNHPDLFSGGPKNLKAIPDDEEEDQFGYWKRSGKMIVVE
SLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDT
SIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTA
GTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPGASQSTETSAIFAGT
GSEVQTPKLHLKRKLPPAFGADHNIPICRKFPDSNASTNDTTSSEEKFTAKGAGVNAITS
DQGDPLKDAPQTPRNLTGSGGPEEKTKAVPILEEFVTSGRVDCSSSPRTSKMDGLSSEES
IHEKQGLSDRRESCQAQTEPLQENKESENNFSKHKSKTKHSVLEEETLEQLQRPKSKLKN
TKLCRDARFEGTRIPHLVKKRRYQKQDSEIESETSEQSNDDYVLEKLFKKSVGVHSVMRH
DAIMDGADPDYVLVEAEANRVAQDALKALRLSRQQCLGASSGVPTWTGHRGISGAPAGIK
SRFGQKRNSKFSVQHPSSASSKEKCQDGVPRKDGKDNASEHFSGKVEDTESSPGALPSSS
LLAKMRARNHLILPQRLESENAHQEAPAPPPPTTEHDDLLVEMRNFIAFQARVDGQASTQ
EILQEFESKLSASQSCVFRQLLRNLCTFHRTSSGEGIWKLKPEYC
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgcgagaatctcccactcaagtcaaactcaggagcaagactgtttgctcagc
aagactgagcaaagtcaatgtgtcagtgataaacaagaaatgacaatcaagcaagaagat
gatggcaatatggaggtggaggagagcctcccctcttgttctcctgctaatggaccatct
gcttctgccgaggggcgttcatcggaagttccgaagagagggccagccctgctgcatatc
gacagacatcagatacagacggtggagccaagtgcacaggcccttgaactgcaggggtta
ggtgtggatgtgtatgaccaggacgtgctggaacagggtgtgcttcggcaggtggacagt
gccattcatgaggccagccgtgcagcccaacttgctgatgtggagaaggagtatcgatca
gtcctggatgatctcacgtcatgtacgacatccctaaggcaaatcaataaaattattgaa
caacttagtcctcaagctgccaccaacagaaatgtcaacaggaaactagattctgtaaaa
cgacagaagtataataaggaacaacagctaaagaagatcacagcaaaacaaaaacgtctc
caggccatccttggaggagtggaggtacaagttgagctagatcatgccaatctggaggag
gaggatatagaaccggggccatcctgtcttggcagcatgctcatgcctattcaggagact
gcttgggaagagctcatccgcactggccagatgacaccttttggaacccagattcctcag
aaatcggagaaaaagcctagaaaactaatgctcaatgaagcatcaggctttgaaaagtat
ttggcagatcaagcaaaattgtcttttgagaggaagaagcaagcttgtaataaaagagca
gctagaaaagccatagcctcggtcgcttctgagctgagtgcaacagtcgatgaaaacaaa
tcaaatgagcaaagcaaagttctctcaaaaacagataagcgcttgaaaaagcacatcaag
aagctccagaaaagagctcttcatttccaggggagagtggggttgcccaaaggaaagaaa
actttggagtctgacatgagactgaaggtggagggcaattctgagggtgaagagtctgag
tacttacccacagaggaggagctggaggaggcagagggggtcaagctgactggggaggac
aaagactatgaactgaatcccatgctcaagcgctggaaacggcagaaaaaagtaatggtg
caggagaacgaggatgacttttccccaagttctggggaagaagcagaagctgcctgtgga
ggaagaggtcggaaggtagtgagatgccgagatgatggagacgaagattattataagcag
cggttaaggaaatggaataagctgaggctgcaggacaaagagaagtgtctgaagctcgaa
gatgattctgaggagagcgatgctgagtttgacgattttaaaatgccgggttttctgttc
agaaagctttttaagtaccagcagacaggtgttaggtggctgtgggaattgcactgccag
caggcaggaggaattctgggagacgaaatgggattgggcaagaccatccagataattgcc
ttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaattacaggttcaag
ggattgggtccgactataattgtctgtccaacgacagtgatgcatcagtgggtgaaggaa
tttcacacctggtggcctccgttcagagtggcaattctacatgaaactggctcctctaca
cagaaaaaggagaaactaattcgagatattgctcattgtcatggcattttgatcacttct
tactcttacattcggctgatgcaagatgacattagcaggcatgactggcactatgtgatc
ttggacgagggacacaaaattcgaaatccaaatgctgctgtcacccttgcttgcaaacag
ttccgtacccctcatcgcatcatcttgtctggctcaccaatgcaaaataacctccgggag
ctgtggtcgctctttgacttcatcttcccaggaaaattaggcacattgcccgtgttcatg
gagcagttctcagtccccattaccatggggggatattcaaatgcctccccagtacaggtt
aaaactgcttataaatgtgcatgtgtcttacgagataccataaatccatacctgcttcgg
agaatgaagtcagatgtcaaaatgagcctttctttgccagataaaaatgaacaggtctta
ttttgccgtcttacagaggagcaacataaagtctaccaaaattttatcgattctaaagaa
gtttacagaattctcaatggagacatgcagattttctctggacttgtagccctaagaaaa
atctgcaaccatcctgatcttttttctggaggcccgaagaatctcaaagctattccagat
gacgaagaagaagatcaatttggatactggaaacgttctgggaaaatgatagtagttgag
tccttgttgaaaatatggcacaagcagggtcaacgagtattgctattttctcagtcaaga
caaatgttggacatacttgaagtattccttagagcccagaagtattcttacctcaaaatg
gatggtaccactgcaatagcttcaagacaaccactgattacaagatataatgaggacaca
tccatatttgtgtttcttctgaccacccgggtgggtggcatcggagtcaacctgacaggg
gctaatagagtcattatctatgatcccgactggaacccaagcacagatacacaggcccgg
gagcgagcatggaggataggccaaaagaagcaggtgacggtgtacaggcttctgactgcg
ggtaccattgaagaaaagatttaccaccgacaaattttcaagcagtttctgacaaacaga
gtgctgaaagatcctaagcaaaggcgatttttcaagtccaacgatctttatgagctgttc
actctgacgagtcctggtgcatcccagagcactgaaacaagtgctatttttgcaggaact
ggttcagaagttcagactccgaaactccatttaaaaagaaaacttccaccggcctttgga
gcagaccataatattccaatatgcagaaagttccctgattctaatgcatccacaaatgat
accacatcatctgaagagaaatttacagctaaaggagctggagtaaatgcaataacttct
gatcaaggcgatcctttgaaagatgccccccaaactcctaggaatctcactggcagtggt
ggacctgaagaaaagacaaaggcagtacctatactagaggagtttgtgactagtggacgt
gtggattgttccagttctccaagaactagcaaaatggatgggctatctagtgaggaaagc
atccatgaaaagcaaggtctttctgacagaagagaaagctgccaggctcaaacagaacct
cttcaggagaataaggagtcggaaaataatttttcaaagcacaagtcaaaaacaaaacat
agtgtgctggaagaagagaccctggagcaacttcagaggccaaagtcaaagcttaagaac
actaagctttgtagagatgccaggtttgaaggaacccgaattccacacctggtgaagaaa
agacggtaccagaagcaggacagtgaaattgagagtgagaccagtgaacagagcaatgat
gattatgtcttggaaaagcttttcaaaaagtcagtcggtgtgcacagtgtcatgagacat
gatgctatcatggatggagctgatccagattatgtgctggtggaggcagaggccaaccga
gtggcccaggatgctctgaaagcactgaggctctctcgtcagcaatgtctgggggcatcg
tctggtgttcccacctggacgggccataggggcatttctggtgcaccagcaggcataaag
agtagatttggtcagaaaaggaattccaagttctctgtgcagcatccttcttcagcatcg
tcaaaggagaaatgccaggatggtgtcccaagaaaagatggaaaggataatgcttctgag
cacttcagtggaaaagtggaagatacagagtcttcacctggggctctcccttcatcctca
ctgttggctaaaatgagagctaggaaccacctgattctgccacagcggctggaaagtgaa
aatgcacaccaagaggctcctgctccaccaccccccaccacggaacacgatgacctgctg
gtggaaatgagaaacttcattgcttttcaggcccgtgtggatggccaggcaagcactcag
gagatactacaggagtttgaatcgaagctgtcagcctcacagtcttgtgtctttcgacaa
ctgttgagaaatctatgtacttttcatagaacttctagtggcgaaggaatttggaaactt
aagccagaatactgctga
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integrated database retrieval system
