Vulpes lagopus (Arctic fox): 121484523
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Entry
121484523 CDS
T07435
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg05017
Spinocerebellar ataxia
vlg05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
121484523 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
121484523 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121484523 (VLDLR)
Membrane trafficking [BR:
vlg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121484523 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
121484523
NCBI-ProteinID:
XP_041599840
LinkDB
All DBs
Position
2:148287851..148323566
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AA seq
845 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESRATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDENPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCAPPTCGEHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVMHTKCP
ASETQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDKKICGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDVASKTISVA
TLDGTRRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMQNGGCEYLCL
PAPQINDHSPKYTCSCPNGYTLEANGRECHRINVTTAVSEATVPPKGTSAAWAILPLLLL
AMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVST
DDDLA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagccgcgccaccggagcgggaagaaaagccaaatgtgaaccctcccaattccagtgc
acaaatggccgctgtattacactgctgtggaaatgcgacggggatgaagactgtgctgat
ggcagtgacgaaaagaactgtgtaaagaagacgtgtgcagagtctgactttgtgtgcaac
aatggccagtgcgtccccaaccggtggcagtgtgacggggatcctgactgtgaagatggt
tctgacgaaaacccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatcccagtgtcctggaggtgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacatcacatgcagcccggacgagttcacc
tgctccagcggccgttgcatctccaggaacttcgtctgcaatggccaggacgactgcagt
gacggcagtgacgagctggactgtgcgccccccacgtgcggcgagcatgagttccagtgc
agcacctcttcctgcatccccctgagctgggtgtgcgacgatgacgccgactgctccgac
cagtcagacgagtccctggagcagtgtggccgacagcccgtgatgcacaccaagtgccca
gccagcgagacccagtgcggctcaggcgagtgcatccacaagaagtggcgctgcgatggg
gaccccgactgcaaagacggtagcgacgaggtcaactgtccttcgagaacctgccggcct
gaccagtttgagtgtgaggacgggagctgcatccatggcagcaggcagtgcaatggtatc
agggactgtgtggacggctcggatgaagtcaactgcaagaacgtcaatcagtgcttgggc
cctggaaagttcaagtgcagaagtggggagtgcatagatatcggtaaagtatgtaaccag
gagcaggactgcagggactggagtgacgaacccctgaaagaatgtcacgtaaatgaatgc
ttggtcaataatggtggctgttcgcacatctgcaaagacctagttataggctatgaatgt
gactgcgcagctgggtttgaactgatagataagaaaatttgtggagatattgacgaatgc
caaaatccaggaatctgcagccaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcggggctatcagatggatcttgccaccggcgtgtgcaaggcagtaggtaaagag
ccaagtctgatcttcacaaatcgaagagacatccggaagattggcttggagaggaaagaa
tatatccaactagttgaacagctaagaaacactgtagctcttgatgcagacattgcagct
cagaaactgttctgggctgatctgagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgtggcttctaagactatttcagtagct
accctagatgggaccagaaggaagttcctgtttaactctgacttgcgggagcctgcctcc
atagctgtggatccactctctgggtttgtgtactggtcagactggggagaaccagctaaa
atagaaaaagcaggaatgaatggatttgataggcggccgcttgtaacagtggacatccaa
tggcctaatggaattacacttgaccttataaagagtcgtctctactggcttgactccaag
ttgcacatgttgtccagcgtggacttaaatggccaagaccgtaggattgtccttaaatct
ctggagttcctagctcatcctctggcgctaaccatatttgaggatcgtgtctactggata
gatggggaaaatgaagcagtctatggtgccaataaatttactggatcagagctggccacg
ctagtcaacaaccttaatgatgcccaagacatcattgtctatcacgaactcgtccagccg
tcaggtaaaaactggtgtgaagaggacatgcagaatggaggctgtgaatatctgtgcctg
ccagcaccacaaatcaacgatcactctccaaaatacacgtgttcctgtcccaatgggtac
actctagaggcaaacggccgggagtgccacaggatcaatgtgaccacagcagtatcagag
gccactgttcccccaaaaggcacttctgctgcctgggccatccttcctctcttgctctta
gcaatggcagcggtaggtggctacttgatgtggcggaattggcagcacaagaacatgaaa
agcatgaactttgacaatcctgtgtacttgaagactactgaagaggacctgtccatagac
attggtagacacagtgcttctgttggacacacgtaccccgcaatatcagttgtaagcaca
gatgatgacctagcttga
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