Vulpes lagopus (Arctic fox): 121484614
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Entry
121484614 CDS
T07435
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121484614 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121484614 (NEIL1)
Enzymes [BR:
vlg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
121484614 (NEIL1)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121484614 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
121484614
NCBI-ProteinID:
XP_041600002
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All DBs
Position
2:complement(43458760..43463942)
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AA seq
389 aa
AA seq
DB search
MPEGPELHLASRFVNAACAGLVFGGAVETSRCSRGPAVPFESSAYRISASARGKELRLAL
RPLPGARPAREPLALVFRFGMTGSFRLAPGDALPAHAHLRFYTAPPGPRLALCFVDARRF
GRWHLGGEWQPGRGPCVLLEYERFRENVLRNLADKAFEQPICEALLDQRFFNGIGNYLRA
EILHRLGIPPFEKARTVLETLRQRRPSPEQTLSQKIRAKLQSPDLLELCHSVPKEVVQLG
GKGYGPESGEEDFAAFRAWLRCYGVPGMSSLRDRRGRTIWFQGDPGPLAPKGVKSCKKKS
KGAQQGLEHRTEDPLLPSVARSRSRGARRGPPEQGTAQQPEGTSLQQDPEVPPAPVKGRR
RRQPAALGHRRPQRIKADTPSLEEGMSAS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggccccgagctgcacctggccagccgctttgtgaacgcggcgtgcgcgggc
ctggtgttcggcggcgccgtggagacgtcgcgctgcagccgcggccccgcggtgcccttc
gagagcagcgcctaccgcatctcggcctcggcgcgcggcaaggagctgcgcctggcgctg
cgccccctgcccggggcccggcccgcgcgggagccgctggccctggtcttccgattcggc
atgaccggctccttccgcctggcgcccggggacgcgctgcccgcccacgcgcacctgcgc
ttctacacggcgccgccgggcccgcggctcgcgctctgcttcgtggacgcccgccgcttc
ggccgctggcacctcgggggcgagtggcagccaggccgcgggccctgcgtcttgctggag
tacgagcggttcagggagaatgtgttacgaaacctggcggacaaggcctttgagcagccc
atctgcgaggccctcctggaccagaggttcttcaatggcatcggcaactacctccgggcg
gagatcctgcaccgcctggggatacccccgttcgagaaggcccgcacggtgctggagacg
ctgcggcagcgcaggccgagcccggaacagaccctgagccagaagatcagggctaagctg
cagagcccagacctgctggaactgtgtcactcggtgcccaaggaagtggtccagctgggg
ggcaaagggtacgggccggagagtggagaggaggactttgctgcctttcgagcatggctg
cggtgctacggcgtgccgggcatgagctctctgcgggaccggcgtggccggaccatctgg
ttccagggggatcctgggcccctggcacccaaaggagtaaagtcctgcaagaaaaaatcc
aagggagcgcagcaggggctggagcacaggacggaggaccctctccttccaagcgtggcc
cgttccaggtcacgtggggcacggagaggccctcctgagcaaggtacagcccagcagccg
gaggggaccagcctccagcaggacccagaagtgcccccggcccccgtgaaggggaggagg
aggaggcaaccagcagccttgggccaccgaagaccccaaaggatcaaggccgacaccccg
tccttggaggaggggatgtcagcctcttag
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