Vulpes lagopus (Arctic fox): 121484633
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Entry
121484633 CDS
T07435
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121484633 (TDRD12)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
121484633 (TDRD12)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121484633 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
121484633
NCBI-ProteinID:
XP_041600027
LinkDB
All DBs
Position
2:complement(175813288..175882584)
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AA seq
1339 aa
AA seq
DB search
MPGPWGSGDARSRPGGGRWDPPAAAVSCLREDGGDLPASQIEDPGCFWVIIKGCSPFLDH
EVDYQKLNSAMNDFYNSMCQDIEIKPLMLEEGQVCVVYCQELKCWCRAVIKSIVSSADHY
LAECFLVDFAKYIPVKSKNIRVAVETFMQLPYRAKKFRLYCTKPVTLHIDFCEDSAEIVP
AKKWDSAAVQYFQNILKATTQVEAKLCAVEQDTFEVYLYATIENEKVCVNDDLVAKNFAR
YVSPKENKNVDSVEKPRLNIKSTSFSSKLNPALTLWPMFLQGKDSQGVENSHGLTFLAQS
LQHPWRPKGVVGDLGPSAVILDKNKKCNMDSLRDSPKKKSEKKQQHICLKDVNKCVESSV
YWPTKRGITIYAEPDIPAASVLCQKPNEKPLRLAEKKEHNEKNGCVKLLQFLNPDPLRTD
GLSDLRQLQKLRSSSQQPLAVLRNKIEPCLSIDTSPLSADLRKALQRNKFPGPSHAESYS
WPPIARGCDVVVISHCGNDPLLYLPPVLTILQTGGCYKSLPSRNGPLAVIVCPGWKKAQF
IFELLEDYSMSSKPLHPVLLTIGLHKDEAKNMKLPKGCDIIVTTPHSLLRLLKYQSLLFL
RLCHLILDEVEVLFSEAHEEMFAILDNLKKNIDVEERESAPHQIVAVGVHWSRHIEQLVK
EFMNDPYVVVTAMEEAALYGGVQQVVHLCLECEKTSTLLQTLDFTPSQAQKTLIFTGSVA
ETEIVCKVVESSSIFCLKMHKEMVLNLKRILEQWKKKLSSGSHLVLALTDDCIPLLAITD
ATCVIHFSFPSSPKVFGGRLYCMSDHFQSSTEQGSPAEQGDKKTKSVLLLTERNACHTVG
VLRYLERADAKIPSELYEFTAGVLEAKEDKKARRPLCLYLKAFGFCKDKRICPNRHHVNP
EMDTPRKLSNQALPTFGYIKIIPFYISNATHYFGRIVDKQVDLYSTLNAEMNEYFKGNSN
KTSVEKVEKFGLYGLAEKTLFHRVEVLEMSQKEDAWGPDRVLVKFIDEGRTGLITRDQLL
RLPEKFHALPPQAVEFIVCRVKPADNEVEWNPKVTRYIHHKIIGKLHDAKVILALGNTVW
VDPMVHITKLSNLKTSVIDYNVRAEILSMGMGVDNSEHTEQLKTLYEGAKMPAGEGSLSQ
ALVPSPAEDAARPQSPRQDDSEGGADAQANPEIQKHETLPENTSDCSLSRTTEPPKSFHP
QIKWFQKDDVVILKIKIRDVKDYACKYFRDRVVFSAWAGEKFYLADLELRANIVKDACEC
TVTNEEPVITLAKETRASWCSLLRQRNPNVAFDFDHWEECEEDSHFPQVANSKKNLPCKV
AEVTESGEEPSEEDWSDSE
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcccctggggctccggtgatgctcggtcccggccgggtggagggaggtgggac
ccgcccgcagctgcagtttcgtgtctcagggaagacggtggagacttacctgcatctcag
attgaagatccaggatgcttctgggttattataaaaggatgtagtccctttttagatcat
gaagttgattatcaaaaactgaatagtgccatgaatgacttctataatagcatgtgccaa
gatatagaaataaaaccgttaatgttggaagaagggcaggtctgcgtggtgtactgtcag
gagctgaagtgctggtgcagggccgttatcaagtcgatcgtgtcttcggcagaccattac
ctggcggagtgtttcctcgtggattttgccaagtacatcccggtgaaatctaaaaacatc
cgggttgcagtagaaactttcatgcagcttccctaccgagcgaaaaaattcaggctgtac
tgcacgaagcctgttacgttgcacattgacttctgtgaagatagcgccgagattgtacca
gccaagaagtgggacagtgcagctgtgcagtacttccagaacatcctaaaagcaaccacc
caggtggaagccaaattatgtgctgtggaacaagacacttttgaggtctacctttatgca
accatagaaaatgaaaaagtctgtgttaacgatgatctggttgcgaagaactttgctcgt
tatgtatcacccaaggagaataaaaatgttgattctgtagagaaaccaagactgaatata
aagtcaacatccttttccagtaaactcaatcctgcacttactctttggccaatgtttttg
caaggaaaagattctcaaggagtggaaaattcacatggcttaacttttctggctcagtct
ctccagcatccgtggcggcccaagggtgttgttggtgaccttggcccaagtgctgtgatc
ctggataaaaataaaaaatgtaatatggattcattaagagattcacccaaaaagaaatct
gaaaagaaacaacagcacatctgtttgaaagatgtaaataagtgtgttgaatcctcagtg
tactggccgacaaagagggggataaccatatatgctgagccagatataccagcagcaagc
gttttatgtcagaagccaaacgagaaaccactcaggttggccgagaagaaagaacacaac
gagaaaaatggctgtgtgaagttattgcagttcttaaatcctgatcctttgagaactgat
gggctctctgatctgcggcagctgcagaagctgcggtccagctcccagcagcccttggcc
gtgctccggaacaagattgagccttgcttatccattgacacgtcgccactgtcggcagac
ctgagaaaggcccttcagaggaacaagttcccgggacctagccacgccgagtcctactcg
tggcctcccatagcgcggggctgtgacgtggtggtcatctctcactgtgggaatgatcct
ctgctgtacctcccgccagtgcttacgattctgcaaacggggggctgctacaagtcttta
ccaagtagaaatggacctctggcagtcatcgtgtgccctgggtggaaaaaggcccaattt
attttcgaattactggaagactatagcatgtcctccaagcctcttcatccggtgttgtta
acaattggactccacaaagatgaagccaaaaacatgaagcttccaaaggggtgtgacatc
attgtgacgacaccccacagcctcctgagacttctcaaataccaaagcttgctatttctc
aggctttgtcacctcattttggatgaggtggaagtgttattctctgaagctcatgaagaa
atgtttgccatattagataacttaaaaaaaaatattgatgttgaagaaagggaatccgca
cctcatcagattgttgccgttggagttcattggagcagacacatagaacagctggtcaaa
gagttcatgaatgacccctacgttgtggtcacggccatggaagaggcagctctctatggc
ggcgtccagcaggtagtgcacctttgcctagaatgtgaaaaaacctctactcttctccag
actctagatttcactccaagtcaagcacagaagaccttgatctttactggttctgtagct
gaaacagaaatagtgtgtaaggtagtagaaagcagttcaatattttgcttgaaaatgcat
aaagaaatggttttgaatttaaaacgtattttagaacagtggaagaagaagttaagttct
ggctctcaccttgtattagccctgactgacgattgcataccactcttggccatcaccgac
gccacgtgtgtgattcacttcagctttccttcctcaccgaaagtttttggtggacgcctc
tactgcatgtctgatcacttccagagttccaccgagcagggttctcccgcagagcaggga
gataagaaaaccaaatctgtcttgctgctgacggagagaaacgcgtgccacacggttggt
gtcctgcgctacctggagcgagcagatgccaagattccctcggagctctatgagtttacc
gcaggggttctggaagccaaagaagataaaaaagccaggaggcctctttgtctgtatctt
aaggcgtttggtttttgcaaagacaaaaggatctgtcctaatcgacaccatgttaatcca
gaaatggacacaccaaggaaattatccaaccaagctctaccgacgtttggatacatcaaa
ataatacccttttatatttcgaatgcaacgcattactttggtcgtatagttgataaacaa
gtggatctttattcaactcttaatgctgaaatgaatgagtattttaagggtaacagcaat
aaaacaagtgttgaaaaggtggagaaatttggattatatggattagcagaaaaaacactt
ttccacagggttgaggtgctggagatgagccagaaggaagacgcctggggtccagaccgt
gtccttgtgaagttcatagacgaaggccggacgggactcatcaccagagaccagctgctg
cgtctccccgagaagttccacgctctgcccccccaggcggtggagtttattgtttgcaga
gtgaagcctgcggacaacgaagttgagtggaatccaaaggttaccaggtacattcatcat
aaaattattggaaaattgcacgatgccaaagtgatactggctttgggaaatacagtgtgg
gtggatccaatggtgcacattacaaaactttcaaacttgaaaacatctgtcattgattat
aacgtgcgtgctgaaattttgtcgatgggaatgggcgttgacaactcagagcatacagaa
cagctgaagacattatacgaaggagctaaaatgccagctggtgaaggaagcctgagccag
gccctcgtgccttctccagcagaagatgctgctcgtccgcagagcccacggcaggacgac
tcagaaggaggtgctgatgcccaggcaaacccagaaatccaaaagcatgaaacgttacct
gaaaacacgagtgattgttcccttagcagaaccacagagcctccgaaaagcttccaccca
caaatcaagtggttccaaaaagacgatgtggtcatactgaagataaaaataagggatgta
aaagattacgcatgtaaatatttcagagatagagtcgttttcagtgcctgggccggagag
aagttctacttggccgacctggagctgcgggccaacatcgtgaaagatgcctgcgagtgc
acagttacgaacgaggagcctgtgatcacccttgctaaggagacgagggcgtcgtggtgc
agcctcctcagacagaggaatcctaatgtggcttttgatttcgatcactgggaagaatgt
gaggaggacagccacttcccccaggttgcgaattctaaaaaaaacctgccctgcaaagtg
gcagaggtgaccgagagcggggaggagccgtcggaggaagactggagtgacagcgaatga
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