Vulpes lagopus (Arctic fox): 121484662
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Entry
121484662 CDS
T07435
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121484662 (MMS19)
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121484662 (MMS19)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121484662 (MMS19)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
121484662 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT
Dopey_N
HEAT_EZ
HEAT_2
Motif
Other DBs
NCBI-GeneID:
121484662
NCBI-ProteinID:
XP_041600084
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All DBs
Position
2:30542790..30577647
Genome browser
AA seq
1029 aa
AA seq
DB search
MAAAAALEAVAPTGALWGLVHDFVMGQQEGPADQVAADVKSGSYTVLQVVEALGSSLENP
EPRTRARGIQLLSQVLLQCQSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLCV
ALPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYSIITNFMRTREEELKGLGADFTFGFIQV
MDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQRED
LILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLPS
LWASIRREVFQTASERVEADGLAALHSLTACLSRSVLRADAEDLLDSFLSSILQDCRHHL
CEPDMKLVWPSAKLLQAAAGASARACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGF
LKLHQKWSYEDKDEKPLNGFKDQLCSLMFMALTDTSTQLQLVGIRTLTVLGAQPDLLSSG
DLELAVGHLYRLSFMEEDSQSCRVAALEASGALSTLYPVAFSRHLVPKLAEELCRGELDL
ARDEPTKCSRHLRCLQALSAVSTHPSIVKETLPLLLQHLCQMNKGNMVAGTSEVIAVCQS
LQQVAEKCQQDPESCWYFHQTAVPCLFALAVQASMPEKEHSVLKKVLLEDEVLAAMVSVI
GTATTHLSPDLAAQSVACIVPLFLDGNISFLPENSFPCRFQPFQDGSSGQRRLVALLMAF
VCSLPRNVEIPQLNQLMRELVELSCCPSCPSSSTAAAKCFAGLLNKLPAGQQLDEFLQLA
VDKVEAGLSPGPYRSQAFTLLLWVTKALVLRYHPLSSCLTDRLMGLLSDPELGPAAADGF
SLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHAASQDVKPNYLKGLSHVLNR
LPKPVLLPELPTLLSLLLEALSCSDCVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFLN
LSSSPSMAVRIAALQCMHALTRLPTTVLLPYKPQVIRALAKPLDDKKRLVRKEAVSARGE
WFLLGSPGS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgctctggaggcggtggcgcctacgggcgcgctgtggggcctcgtg
cacgacttcgtcatgggtcagcaggagggccccgctgaccaagtggctgcagatgtgaaa
tctgggagctatacagtgttacaagtggtggaagcccttgggtcctctctagagaatcca
gaaccccgaactcgggcacgaggaatccagcttctgtcacaggtgctactccagtgtcag
tccttgctcctggagaaagaagtggtacacctgatcctattttatgagaaccggctgaag
gaccatcatcttgtgatcccatctgtcctgcaaggtttgagggcgcttagcctgtgtgtg
gccctgcctccaggactggccgtctctgtacttaaagccatcttccaggaggtccacgtc
cagtccctgcctcaggtggaccgacacacagtctacagtatcattaccaacttcatgcga
acccgtgaagaagagctgaagggccttggagctgacttcacctttggcttcatccaggtg
atggatggggaaaaggatccccgaaatctcctggtggctttccgcatcgtccatgacctc
atctccagggactatagcctaggaccctttgtggaggagttgtttgaagtgacgtcctgt
tacttccctattgattttacccctccacctaatgatccccatggcatccagagagaagat
ctcatcctgagtcttcgagctgtgctagcttccacaccgcgatttgctgagttcctgctg
cccctgctgattgagaaagtggattctgagattctgagtgccaagcttgattctctgcag
actctgaatgcttgttgtgctgtgtacggacagaaggaactaaaggacttcctccccagc
ctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtggaggctgat
ggcctggcagccctccactctctgactgcgtgtttgtctcgctctgtgctgagggctgat
gctgaggacctccttgactccttccttagcagcattctacaggactgcaggcaccatcta
tgtgaaccggacatgaaactggtgtggcctagtgccaaattgttacaggcagctgcaggt
gcatctgctcgggcctgtgaccacatcaccagcaacgtgttgcctttactgctggaacag
ttccacaagcacagtcagagcaaccagcgacggacaatccttgaaatgatcctgggtttt
ttgaagctgcatcagaaatggagctatgaagacaaggatgaaaagccgctgaatggcttc
aaggaccagctctgctcactgatgttcatggctctgacagacaccagcacccagcttcag
cttgttggcatccgtacactcacagtcttgggtgcccagccagacctcttgtcttctggg
gacttggagctggcagtgggtcacttgtacaggctgagcttcatggaggaggactcccag
agttgcagggtggcagcactggaagcatcaggagccctgtccactctctaccctgtagcc
ttcagccgccacctggtgcccaagcttgctgaggagctgtgcagaggggagttagatttg
gctagagatgagcccacaaaatgctcccggcatctacgctgtttgcaagccttgtcagct
gtatcaacacatcccagtattgtcaaggagaccctgcctctgctgctgcagcacctctgc
cagatgaacaaagggaatatggttgcaggaaccagtgaagttattgccgtctgtcaaagc
ctccagcaggtggcagaaaaatgccagcaggaccctgagagctgctggtatttccatcag
acagctgtaccttgcctgtttgccttagctgtgcaggcttccatgccagagaaagaacac
tcagttctgaaaaaagtactgttggaagatgaggtcttggctgccatggtatctgtcatt
ggcactgccactacccatttgagccctgatttagctgcccagagtgtcgcctgcattgta
ccccttttcttggatggcaacatctcctttctgcctgaaaacagcttcccttgcagattc
cagccattccaggatggctcctcaggacagaggcggcttgttgcactgcttatggccttt
gtctgctccttacctcgaaatgtggaaatccctcagctgaaccaactcatgcgggagctt
gtagagctgagctgctgccccagctgcccctcctcctctactgccgctgccaagtgcttt
gcaggactcctcaacaagctccctgcagggcaacagctagatgaattcctgcagctggct
gtggacaaagtagaggctggccttagtcctgggccctatcgcagtcaggccttcacactg
cttctctgggtaacaaaggcccttgtactcagataccatcctctcagctcctgccttact
gaccgactcatgggcctcctgagtgatccagaattaggcccggcagcagctgatggcttc
tctctgctcatgtctgactgcactgatgtgttaacccgggctggccatgctgaagtgcgg
atcatgttccgccagcggttcttcacagataatgtgcctgctttggtccagggcttccat
gctgcttcccaagatgtgaagccaaattacctgaagggcctgtctcatgtacttaatagg
ctgcctaagcctgtgctcttgccagagttgcccacgctgctttccttgctgctggaagcc
ctatcctgctctgactgtgtagtacagctctccaccctcagctgccttcagcctcttcta
ttggaagcaccccaggtcatgagtcttcacgttgacaccctcgtcaccaagtttctgaac
ctcagctctagcccttccatggctgtccggattgctgcactgcagtgtatgcatgctctt
actcgtctgcccaccactgtgctgctgccgtacaaaccacaggtgatccgagctttagcc
aaacccctggatgacaagaagagactggtgcgcaaggaggcggtgtcagccaggggagag
tggtttctgctggggagccctggcagctga
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