Vulpes lagopus (Arctic fox): 121484664
Help
Entry
121484664 CDS
T07435
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121484664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121484664
03041 Spliceosome [BR:
vlg03041
]
121484664
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121484664
Spliceosome [BR:
vlg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121484664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WDR55
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML
EIF3I
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_IP5PC_F
WDR54
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121484664
NCBI-ProteinID:
XP_041600088
LinkDB
All DBs
Position
2:complement(125006777..125008296)
Genome browser
AA seq
296 aa
AA seq
DB search
MPVCVAFVVARKKRRQKAYSEKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEI
LKKGCKELWRCQPPYRTSLEVPETNALLLIPKENSLILAGGDCQLHTMDLETGTFTRALR
GHTDYVHCLALRERSPGVLSGGEDGAVRLWDFRTAKEVQTIEVYKHEECSRPHNGRWIGC
LAPDSDWMVCGGGPALTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSAGQGRCVNQWQL
SGELKAQVPGSSLGLLSLSLNQQPAAPKCKVLTDAGNSCRVDVFTNLGYHAFSLSF
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctgtgttgccttcgtggtcgctcggaaaaaacgacgacaaaaagcgtatagt
gagaagccagtggtgacattccaagcccatgatgggccggtctacagcatggtctccacg
gatcgacatctgctcagtgctggggatggggaagtgaaggcctggctttgggcagagatc
ctcaagaagggttgtaaggagctgtggcggtgtcagcccccatacaggaccagcctagaa
gtgcctgagaccaatgctttgcttctcatccccaaggagaattctctcatcctggcaggg
ggagactgtcagttgcatacgatggaccttgagaccgggaccttcacacgggccctccgg
ggccacacagactatgtccactgcctggcactgcgggagcggagtcctggggtgctgtca
ggtggagaggatggagccgtgcgactttgggacttccgcacagccaaggaagtccagacc
atcgaggtatataagcatgaggagtgctcgaggccacacaatgggcgttggatcggctgt
ttggcccctgactcagactggatggtctgtggaggaggcccagcactcaccctctggcac
ctccgatcctccacacccacgactattttccccatacgggcgccacagaaacacgtcacc
ttctaccaggacctgattctgtcagctggccagggccgctgtgtcaaccagtggcagcta
agtggggagctcaaggcgcaggtgcctggctcctccctagggctgcttagcctcagtctc
aaccagcagccagcagcacccaagtgcaaggtcctgacagacgcaggtaacagctgccgc
gtggatgtcttcaccaatctcggctaccacgccttctccctgtccttctga
DBGET
integrated database retrieval system