KEGG   Vulpes lagopus (Arctic fox): 121484664
Entry
121484664         CDS       T07435                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03013  Nucleocytoplasmic transport
vlg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121484664
  09122 Translation
   03013 Nucleocytoplasmic transport
    121484664
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vlg03019]
    121484664
   03041 Spliceosome [BR:vlg03041]
    121484664
Messenger RNA biogenesis [BR:vlg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     121484664
Spliceosome [BR:vlg03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121484664
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_NOL10_N WDR55 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_EML Beta-prop_WDR36-Utp21_2nd EIF3I TRM82_WD Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_IP5PC_F Beta-prop_TEP1_C WDR54 NBCH_WD40 Beta-prop_CAF1B_HIR1 ASA1 DSE1_N Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_DCAF4 CFAP251_N
Other DBs
NCBI-GeneID: 121484664
NCBI-ProteinID: XP_041600088
LinkDB
Position
2:complement(125006777..125008296)
AA seq 296 aa
MPVCVAFVVARKKRRQKAYSEKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEI
LKKGCKELWRCQPPYRTSLEVPETNALLLIPKENSLILAGGDCQLHTMDLETGTFTRALR
GHTDYVHCLALRERSPGVLSGGEDGAVRLWDFRTAKEVQTIEVYKHEECSRPHNGRWIGC
LAPDSDWMVCGGGPALTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSAGQGRCVNQWQL
SGELKAQVPGSSLGLLSLSLNQQPAAPKCKVLTDAGNSCRVDVFTNLGYHAFSLSF
NT seq 891 nt   +upstreamnt  +downstreamnt
atgcccgtctgtgttgccttcgtggtcgctcggaaaaaacgacgacaaaaagcgtatagt
gagaagccagtggtgacattccaagcccatgatgggccggtctacagcatggtctccacg
gatcgacatctgctcagtgctggggatggggaagtgaaggcctggctttgggcagagatc
ctcaagaagggttgtaaggagctgtggcggtgtcagcccccatacaggaccagcctagaa
gtgcctgagaccaatgctttgcttctcatccccaaggagaattctctcatcctggcaggg
ggagactgtcagttgcatacgatggaccttgagaccgggaccttcacacgggccctccgg
ggccacacagactatgtccactgcctggcactgcgggagcggagtcctggggtgctgtca
ggtggagaggatggagccgtgcgactttgggacttccgcacagccaaggaagtccagacc
atcgaggtatataagcatgaggagtgctcgaggccacacaatgggcgttggatcggctgt
ttggcccctgactcagactggatggtctgtggaggaggcccagcactcaccctctggcac
ctccgatcctccacacccacgactattttccccatacgggcgccacagaaacacgtcacc
ttctaccaggacctgattctgtcagctggccagggccgctgtgtcaaccagtggcagcta
agtggggagctcaaggcgcaggtgcctggctcctccctagggctgcttagcctcagtctc
aaccagcagccagcagcacccaagtgcaaggtcctgacagacgcaggtaacagctgccgc
gtggatgtcttcaccaatctcggctaccacgccttctccctgtccttctga

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