Vulpes lagopus (Arctic fox): 121484734
Help
Entry
121484734 CDS
T07435
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121484734 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121484734 (TAF5)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121484734 (TAF5)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121484734 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
121484734 (TAF5)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121484734 (TAF5)
STAGA complex
121484734 (TAF5)
TFTC complex
121484734 (TAF5)
SAGA complex
121484734 (TAF5)
SLIK complex
121484734 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
VPS8_N
ABM-like
PROPPIN
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
121484734
NCBI-ProteinID:
XP_041600291
LinkDB
All DBs
Position
2:complement(25548326..25563523)
Genome browser
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGTGEGGGGTTNNGPNGGGGNVAAAASSAGG
DGGTPKPSVAVSAVAPAGAAPVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGAGAPGEADGAGTEAASALLSRVTASAPGPAAPDPPGTGASGAPAVSGLAT
GPPAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagccagagggaccg
ccgacgctgctacctccgcaggcgggggacggcactggcgagggtggcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcggcggcggcgtcgtcggccggcggg
gatggtgggacccccaaaccctcggtggctgtctccgccgttgctccggcgggggcggcc
ccggtgcccgccgctgctccggaggccggcgccccccacgaccgacagactctgctggcc
gtgctgcagttcctgcggcagagtaacctccgcgaggccgaagaggcgctgcgccgtgag
gcccggctgctggaggaagcagtggcgggcgccggagccccgggagaggcggacggcgcc
ggtacggaggcggctagcgcgcttctcagccgggtcacagcctcggcccccggccccgcg
gcccctgaccctccgggcaccggcgcttcaggggcccccgccgtctcgggcttagcgaca
ggtcctccggctccggggaaagttggaagcgtagctgtggaagaccagccggatgtcagt
gctgtgctgtcagcctacaaccaacaaggagaccccacaatgtatgaagaatactatagt
ggactgaaacacttcattgaatgttctttggactgccatcgggcagagttatcccaactc
ttttatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaatgaa
gcaaaatcattttttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaaatcaaaggtattctttggtttactaaaagag
ccagaaattgaggtgcctttggatgatgaagatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaaacctaaaaaagatagcattggatccaaaagcaaaaaacaagatcct
aatgctccacctcaaaacagaatccctcttcctgagttgaaagattcagataaattggat
aagataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgtttaccc
tccatttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcact
gatgattctagtttgattgctggaggttttgcagattcaactgttagagtatggtctgtg
acacccaaaaagcttcgtagtgttaaacaagcagcagatcttagcctcatagacaaagaa
tcagatgatgtcttagaaagaataatggatgagaaaacagccagtgagttgaagattttg
tatggtcacagcgggcctgtctatggagccagcttcagtccagacaggaactacttgctt
tcttcttcagaggatggaactgttagattgtggagtcttcaaacatttacttgcttggtg
ggatataaaggacacaactacccagtatgggacacacagttttctccatatggatattac
tttgtgtcagggggccatgatcgagtagctcggctgtgggctacagaccactaccaacct
ttaaggatatttgctggccatcttgctgatgtgaattgtaccaggttccatccaaattct
aattatgttgctacgggctctgcagacagaactgtgcggctttgggatgtcttgaatggg
aactgcgtaagaatattcactggacacaagggaccaatccattccttgacattttctccc
aatgggagattcttggctacaggagcaacagatggcagagtactcctttgggatatcgga
catggtttgatggttggagaattaaaaggccacactgatacagtctgttcacttaggttt
agtagagatggtgaaattttggcctcaggttcaatggataatacagtccggttgtgggat
gctgtcaaagcatttgaagatttagagaccgatgactttactacagccactgggcatata
aatttacctgagaattcacaggagttactgttgggaacatatatgaccaaatcaacacca
gttgtacatctccattttactcgaagaaacttggttctagctgcaggagcttatagtccg
caataa
DBGET
integrated database retrieval system
