Vulpes lagopus (Arctic fox): 121485298
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Entry
121485298 CDS
T07435
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121485298 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121485298 (MYO5C)
04131 Membrane trafficking [BR:
vlg04131
]
121485298 (MYO5C)
03029 Mitochondrial biogenesis [BR:
vlg03029
]
121485298 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vlg04812
]
121485298 (MYO5C)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121485298 (MYO5C)
mRNA cycle factors
P-body specific factors
121485298 (MYO5C)
Membrane trafficking [BR:
vlg04131
]
Others
Actin-binding proteins
Myosins
121485298 (MYO5C)
Mitochondrial biogenesis [BR:
vlg03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121485298 (MYO5C)
Cytoskeleton proteins [BR:
vlg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121485298 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Csm1_N
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121485298
NCBI-ProteinID:
XP_041601416
LinkDB
All DBs
Position
2:63878788..63973016
Genome browser
AA seq
1742 aa
AA seq
DB search
MAGAALYTQYNRVWIPDAEEVWKSAEIAKDYRVGDKVLRLLLEDGTELDYSLDPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKPLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNTHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTVIEGVNDR
AGMVETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQVTAVGNERSSVSEDDRHLEVFCE
LLGLERSKIAQWLCNRKIITTSETVVKPMTRPQAINARDALAKKIYAHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPQGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVETLRASKFHLCANFFRENPVPPSPF
GSAITVKSAKPLIKPNNKQFRTTVGSKFRGSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTKQELSFGDKKEVCKVV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVVIQKHIRGWLQRKKFLRER
QAALTIQQYFRGQQTVRKAVTATALKEAWAAIIIQKYCRGYLVRNLYQLIRVATITIQAY
TRGLLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRASDTEKIQKLESELDRAATHRHNYEEKGKKYKAAMEEKLAK
LQKHNSELEIQKEQIELQLREKTEELKGKMDDLTKQLFDDVQKEEQQRILLEKSFELKTQ
DYEKQISSLKEDIQALKEEKMHLHHQLEEERVTSDGLKGEVAQLRKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEDVRSRLSLEDLEHLNEDGELWFA
YEGLKKATHVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREETDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLETRLNEQTESMKGKLEELSNQLNRNREEEGTQ
RKTIEAQNEIHIKEKEKLISKIQEMQEASEHLKKQFETESEVKSTFRQEASRLTMENRDL
EEELDMKDRVIKKLQDQVKTLTKTIEKGNDVHLSSGTKEYLGMLEYKTEDEEKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDAGMLKSLMNSAINGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLRQYSGEEEFMKLNSPNQNKNCLNNFDLSEYRQILSDVAIRIYHRF
IVVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYS
TMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKITDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggccgcgctgtacacgcagtacaacagggtatggattccggatgctgaagaa
gtttggaagtctgccgaaatagcaaaagactacagagttggtgacaaagtcctgcgactc
ttgctggaggatggaacggagctggattattcccttgatccagaatctctgcctccgctt
cggaaccccgacatcctcgtgggtgagaatgacctcacggccctcagctacctccacgag
cccgcagtgctccacaatctcagaatccgctttgcagaatccaaactcatttacacctac
agtggaatcattttggtggccatgaacccttacaagccgttgccgatctacggagatgcc
atcatccacgcctacagcgggcagaacatgggcgatatggacccgcacatattcgccgtg
gccgaagaggcatacaagcagatggccagaaacaataaaaatcagtcaataattgtaagt
ggggagtcaggtgctggaaagacagtgtctgctcgctacgccatgaggtactttgccacc
gtcagcaagtccagcagtaacactcatgtggaggacaaggttctggcatcgaaccccata
actgaggctgtcggaaatgccaagacgacccgcaatgacaacagtagtcggtttgggaaa
tacacagaaatcagttttgatgagagaaaccaaattataggagccaacatgagaacttac
ctgctggagaaatccagagtcgtctttcaatcggaaaatgaacgaaattaccacattttt
tatcagctttgtgcatctgcacagcagtcggaatttaaacatcttaaattggggagtgca
gaagaatttaattacacaagaatgggaggcagtactgtcattgagggtgtgaatgacaga
gcaggcatggtagagacccagaagaccttcacactgctgggtttcaaggaggattttcag
atggatgtttttaagatcctggcagccatcctgcatctgggcaatgtgcaggtcacagcg
gtgggcaacgagaggtcctcagttagcgaggacgacaggcacctggaggtgttctgtgag
ctcctgggcctggagaggagcaaaattgctcagtggctgtgcaatcgcaaaatcatcaca
acctccgagacggtggtgaagcccatgaccaggccccaggccatcaacgccagggacgca
ctggccaaaaagatctacgctcacctgttcgacttcattgtggagagaattaaccaagcg
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgacgtgaacagctttgaacagttttgcatcaattacgctaatgagaagctgcag
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatacatgaaggaagatatc
ccttggacactgatagatttttatgacaatcaaccagttattgacctgattgaagcaaaa
atgggtattttggaactactggatgaagaatgcttgttaccacaaggaactgatgaaaac
tggcttcaaaagctatataataattttgtcaacaagaactctttgttcgaaaaacccaga
atgtcaaatacatcctttatcatccagcactttgctgacaaggtagaatataaatgtgaa
ggtttccttgaaaagaacagagataccgtctatgacatgttggttgaaaccctgagagca
agcaagtttcatctctgtgccaacttttttcgagaaaatccggttcctccttcccctttt
ggttcagcgatcacagttaaatctgcaaagccacttatcaagccaaacaacaagcagttc
cggaccacagtggggagcaagttccgcggctctctgtacttgctcatggaaaccctcaat
gcaaccacaccccactatgtccgatgcatcaagccaaacgatgagaaattaccctttgag
ttcgactccaaaaggattgttcagcagctgcgagcctgtggcgttctagaaacgattcgc
attagcgcgcagagctacccttccaggtggacatacatcgaattctacagtcgctacggt
gtgctcatgaccaaacaggagctttcatttggtgataaaaaggaagtgtgcaaagtggtt
ttacacaggctcatccaggattctaatcaataccagtttggtaaaaccaaaattttcttc
agagcaggacaagtggcctatttagagaaactccgactggataagctcaggcagagttgt
gttgtgatacaaaagcacatccgtggctggctccagagaaaaaagttcctccgagaaaga
caagctgccctgactattcagcagtacttccggggccagcaaactgtgaggaaagctgtt
acggccacagccttgaaagaagcatgggcagccataatcatccagaagtactgccgtggg
tatctcgtccgcaatttgtaccagctgattcgcgtggccaccatcaccatccaggcctac
acccgaggactcctagcaaggaggaggtatcgaaagatgctggaggaacacaaggcagtg
atccttcagaaatatgcacgagcgtggctggccagacgcagattccagagtatccgaaga
ttcgtgctcaacattcagcttacttacagggtccagcgtttgcagaaaaagctagaagat
cagaacaaagagaaccacgggctggtagagaagctgaccagcctggccgctcttcgggcc
agtgacacggagaagattcagaaactggaatcagagctggacagagcagctacccatagg
cacaattatgaggagaaggggaagaaatacaaggctgccatggaagagaaattggcaaag
cttcagaagcataattcagaactggaaatacaaaaagagcaaatagagctgcagctccga
gagaagactgaagagctaaaaggaaaaatggatgatctcaccaagcagctctttgatgac
gtgcaaaaagaagaacaacagagaatacttcttgaaaaaagttttgaactgaaaacacaa
gactatgagaagcagatctcgtctttgaaagaagacattcaagctctcaaagaggagaaa
atgcacttgcatcatcaactagaggaagaacgtgtcacctcagacggcttaaagggggag
gtggcccaactgagaaagcaggcaaagacaatctctgagtttgaaaaggagatagagcta
cttcagacacagaagatcgatgtggagaaacatgtgcaatcacagaaacgggaaatgaga
gaaaagatgtctgagatcaccaaacaacttcttgaaagctatgacattgaagatgttaga
agcaggctctcgttggaagatttggaacatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagcaacacatgtcttggagagccatttccagtcccaaaaggat
tgctacgaaaaggagatcgaagctttgaacttcaaagtggtgcatctaagtcaagaaatc
aaccacctgcagaaattatttagagaagagactgacatcaatgaaagtatccgtcatgaa
gttaccaggctaacatcagaaaacatgatgatcccagactttaaacagcaaatttcagag
ctggagaaacagaagcaagatctggaaacccgcctgaatgaacaaacagaaagcatgaaa
ggaaaactggaagaattgtctaatcagttgaaccgcaatcgagaagaggagggaacacaa
agaaagaccatagaggcccaaaatgaaatacacatcaaagagaaagagaagctgatcagt
aagattcaagaaatgcaggaggccagtgagcacttgaagaaacaatttgaaactgaaagt
gaagtcaagagtactttccggcaggaagcgtctcgtctaactatggaaaacagggatctt
gaagaagagttagacatgaaggacagagtgatcaagaagctacaagatcaagtcaagact
ctaaccaagacgattgaaaagggcaatgatgtgcacttgtcctcaggaactaaggagtac
cttggaatgctggaatacaagacagaagatgaggagaagctcattcaaaacctcattctt
gacctgaagcctcgtggtgtggtggtgaacatgatcccgggactgccagctcacatcctg
ttcatgtgtgtgcgctacgcagactccctcaacgacgccggcatgctcaagtcccttatg
aacagcgccatcaatggcatcaagcaggtggttaaggaacatttagaagactttgagatg
ctatctttttggctttccaatacatgtcattttctcaactgcctgaggcagtacagtgga
gaagaggaattcatgaagctcaatagtccaaatcagaataagaattgcttgaacaacttt
gacctttcagaatacagacagattcttagtgatgtggctatacgaatatatcatcggttc
attgttgtaatggaaaacaacattcagccaataatagtgcccggcatgctggagtacgag
agcctgcagggcatttctggcctgaagcccacaggcttccggaagcgctcgtctagcata
gacgacacggacgcctacaccatgacctccgtcctgcagcagctgagctacttctacagc
accatgtgccagaacggcctggaccccgagctggtgcggcaggccgtgaagcagctcttc
ttcttgattggggcagtcaccctgaacagcctcttcctgcgcaaggacatgtgctcctgc
aggaaagggatgcagatcaggtgcaatatcagctacttagaagaatggcttaaggataag
aatttgcagaacagcttggccaaggaaactttggaacctctctctcaggcagcctggttg
cttcaggtcaagaagatcacagacagcgatgccaaggagatctatgaacgctgcacctca
ctgtctgctgtgcagatcataaagatccttaattcatacacacctatagacgacttcgag
aaaagagtgactccgtcctttgttcgcaaagtacaggctctcctaaatagccgagaggac
tcgtcacagctgatgttggatacaaaatatctcttccaagttacatttccttttaccccc
tctcctcacgctctggaaatgatccagatccccagcagttttaagctaggctttctcaat
agattataa
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integrated database retrieval system
