Vulpes lagopus (Arctic fox): 121485397
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Entry
121485397 CDS
T07435
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03015
mRNA surveillance pathway
vlg05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121485397 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
121485397 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121485397 (HBS1L)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121485397 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
121485397
NCBI-ProteinID:
XP_041601603
LinkDB
All DBs
Position
2:complement(84793538..84882054)
Genome browser
AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSQRDKPSLVEPVEEYDYE
GLKESSSSLLNHQLSGIDQARLYSCLDHMREVLGDAVPDDTLIDAVLKNKFDVQKALAVV
LEQETMQNWKVKSEGEISSGKIAKGKSIDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTEENGHSFHTLQKGHLSEETSIASSDVLDTVSKSVLPSHTIQTSEEQNSPSVPVKKSG
KLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSGELTKWYKGLCLLEQIDSFKP
PQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKSCTRFRARILIFNIEIPITKGFP
VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtcgaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcgcagcgcgacaaaccttcccttgttgagcctgtagaagaatacgattacgaa
ggcctgaaagagtcctccagttctcttttgaaccatcagctgagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
actttgattgatgcagttctgaagaacaagtttgatgtgcagaaggctctggcagtggtt
ctggaacaagagacaatgcagaattggaaggtcaagagtgagggagaaatatcttcaggg
aagatagcaaaaggaaaatcaatagattctcagtcatctcgaagtgaatctgaaattgtg
cccaaagttgccaaaatgactgtgtctggaaagaagcaaactatgggattcgaagtgcct
ggagtaactgaagaaaatggtcatagtttccacacacttcaaaaaggacatcttagtgaa
gaaaccagcattgcttcttctgatgttcttgacactgtttctaaatcagttctcccatcc
cacaccattcaaacatcagaagagcagaattcaccatcagtaccggtgaagaaatctggc
aagctgaggcagcaaatagatgtcaaagcagaactggagaagcggcaaggagggaagcag
ctcctcaacttggtggtcatcggtcatgttgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgagcaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaa
agggaaaggggagtaacaatggatgttggtatgacaaagtttgagaccacaaccaaagtt
attacattaatggatgctccaggccataaggatttcattccaaatatgattacaggagca
gcccaggcggatgtagccattttagttgtagacgccagcaggggagagtttgaagctgga
tttgagactgggggacagactcgagaacacggcctcttggttcgttctcttggagtaaca
cagcttgcagttgcggtcaataagatggatcaggttaattggcaacaagaaaggtttcaa
gagattactggaaaacttgggcactttcttaagcaagcaggctttaaggaaagtgatgtg
gcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcaatcaggt
gaactcacaaaatggtataaaggactatgtttattagaacaaattgattccttcaagcct
cctcagagatctattgataagccttttagattatgtgtatctgatgttttcaaagatcaa
ggatctggattttgtgtaactggtaaaattgaagctggttatatccagactggtgaccga
ctactagcaatgcctcctaacgaaacttgtactgcaaaaggaatcactctgcacgatgaa
ccggtcgactgggcggcagcaggtgatcatgttagtcttacgttagttgggatggatatc
atcaagatcaatgttggctgcatattttgtggccccaaagagcccattaaatcttgcact
cgtttcagagctcgaatcctcatctttaatattgaaattcctattactaaaggatttcct
gtgctgttacactaccagactgtcagtgaacctgctgttattaaacgattgattagtgtc
ttaaacaaaagcacaggtgaagtgacaaagaagaagccaaaattattgaccaaaggccag
aatgccttggtggagctgcagacacaaaggccagttgctctggagctgtacaaagacttc
aaagagctggggaggttcatgctgcgctacagtggttctacgattgcggcaggcgtggtc
acggagataaaagaatga
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