Vulpes lagopus (Arctic fox): 121485498
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Entry
121485498 CDS
T07435
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121485498 (LINGO1)
Membrane trafficking [BR:
vlg04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121485498 (LINGO1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
121485498
NCBI-ProteinID:
XP_041601915
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Position
2:complement(42940408..43010442)
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AA seq
620 aa
AA seq
DB search
MQVSERMLAGGARSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFS
LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYR
LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIG
TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGN
LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
KSDAGVSAADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcgagaggatgctggcggggggcgcgaggagcatgcccagccccctcctg
gcctgctggcagcccatcctcctgctggtgctgggctcggtgctgtcaggctcggccacc
ggctgcccgccccgctgcgagtgctccgcccaggaccgcgcggtgctgtgccaccgcaag
cgcttcgtagcggttcccgagggcatccccaccgagacccgcctgctggacctgggcaag
aaccgcatcaagacgctcaaccaggacgagtttgccagcttcccacacctggaggagctg
gagctcaacgagaacatcgtgagcgccgtggagcccggcgccttcaacaatctcttcagc
ctgcggactctggggctgcgtagcaaccggctgaagctcatccccctgggtgtcttcacg
ggcctcagcaacctgaccaagctggacatcagcgagaacaagatcgtcatcctactggac
tacatgttccaggacctgtacaacctcaagtcgctggaggtgggcgacaatgacctcgtc
tacatctcgcaccgggccttcagcggcctcaacagcctggagcagctgaccctggagaag
tgcaacctgacctctatccccaccgaggcgctgtcccacctgcacagcctcatcgtcctg
aggctccggcacctcaacatcaatgccatccgggactactccttcaagaggttgtatcgg
ctcaaggtcttggagatctcccactggccctacctggacaccatgacgcccaattgcctc
tacggcctcaaccttacatccctgtccatcactcactgcaacctgaccgctgtgccctac
ctggccgtgcgccacctggtctatctccgcttcctcaacctctcctacaaccccatcggc
accatcgagggctccatgttgcatgagctgctccggctgcaggagatccagctggtgggc
gggcagctggccgtggtggagccctacgccttccgcggcctcaactacctgcgcgtgctc
aacgtgtccggcaaccagctgaccacgctggaggagtcagccttccactccgtgggcaac
ctggagacgctcatcctggactccaacccgctggcctgcgactgtcggctcctgtgggtg
ttccggcgccgctggcggctcaacttcaaccggcagcagcccacgtgtgccacacccgag
ttcgtccagggcaaggagttcaaagacttcccggacgtgctcctgcccaactacttcacc
tgccgtcgcgcccgcatccgggaccgcaaggcccagcaagtgtttgtggatgagggtcac
acggtgcagttcgtgtgccgggcggacggcgacccgccgcccgccatcctctggctctcg
ccccgcaagcacctggtttcggccaagagcaacggacggctcacagtcttccccgacggc
acgctggaggtgcgctacgcccaggtgcaggacaatggcacgtacctgtgcatcgcagcc
aacgcggggggcaacgactccatgccggcccacctgcacgtgcgcagctactcacccgac
tggccccatcagcccaacaagaccttcgctttcatctccaaccagccgggcgagggagag
gccaacagcacccgagccaccgtgcctttccccttcgacatcaagaccctcatcattgcc
accaccatgggcttcatctctttcctgggcgtcgtcctcttctgcctggtgctgctcttt
ctctggagccggggcaagggcaacacgaagcacaacatcgagatcgagtacgtgccccgc
aagtcggacgcaggtgtcagcgccgccgatgcgccccgcaagttcaacatgaagatgatc
tga
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