Vulpes lagopus (Arctic fox): 121485534
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Entry
121485534 CDS
T07435
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04140
Autophagy - animal
vlg04148
Efferocytosis
vlg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121485534 (VPS18)
04148 Efferocytosis
121485534 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121485534 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121485534 (VPS18)
Membrane trafficking [BR:
vlg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121485534 (VPS18)
Hops complex
121485534 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
zf-ANAPC11
KNOX2
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
zf-C3HC4
DUF2514
Motif
Other DBs
NCBI-GeneID:
121485534
NCBI-ProteinID:
XP_041601955
LinkDB
All DBs
Position
2:complement(73884683..73893732)
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGSESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLRAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGAVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPAPTKGSTRAKEAEAGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcagccgtcttgcagccg
ggctgccccagcgtgggcatcccccactcggggtatgtgaatgcccagctagagaaggaa
gtgcccatcttcacgaagcagcgcattgactttaccccttctgagcgtattaccagtctt
gtcgtctcttgtaatcagctctgcatgagcctgggcaaggacacactactccgcattgac
ttgggcaaggcaaacgaacccaaccacgtggagctggggcgcaaggatgatgccaaggtt
cacaagatgtttctggaccacactggctctcacctgctgattgctctgagcagcactgag
gtcctctatgtgaaccgtaatggacagaaggtacggccactggcacggtggaaggggcag
ctggtggagagtgtgggctggaacaaggcactgggcagtgagagcagcacaggccccatc
ctggtcggcactgcccaaggccagatcttcgaagcagagctctccgccagtgagggtggg
cttttcggccctgccccagatctctacttccgcccattgtatgttctaaatgaagaaggg
ggtccagcacctgtgtgctcccttgaggctgagcgaggccctgatgggcgtggcttcgtg
atcgccaccacccggcagcgcctcttccagttcataggccgagcagccgagggagctgag
gcccagggcttctcggggctctttgctgcctacgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagcgagttggccttctatacccccaaactgcgttctgca
cctcgggcctttgcctggatgatgggggacggcgtgttgtatggagcattggactgtggg
cgccccgattccctgctgagcgaggagcgtgtctgggagtacccagagggggtaggtcct
ggggccagcccacccctggccatcgtcctgacccagtttcacttcctgctgctgctggct
gaccgtgtagaggcagtgtgcaccctgacggggcaggtggtgctgcgggatcacttcctg
gagaagtttgggccactgaagcacatggtgaaggactcttccacaggccacctgtgggcc
tacactgagcgagccgtcttccgctaccacgtacagcgggaggcccgagatgtctggcgc
acctacctggacatgaaccgcttcgacctggccaaagagtattgccgagagcggcctgac
tgcctggacactgtcctggcccgagaggccgatttctgttttcgtcaacgccgttacctg
gagagcgcccgctgctatgccctgactcagagctactttgaggaaatcgccctcaagttc
ttggaggcccgacaggaggaggctctagctgagttcctacagcgaaaactggccagtttg
aagcctgctgagcgaacccaggccacgctgcttaccacctggctgacagagctttacctg
agccggctaggagcactacagggtgatcctgaggccctgaacttataccgggaaacacgg
gagcgcttccggtccttcctcagcagtccccgtcacaaagagtggctctttgccagccgg
gcctccatccacgaactgctggccagccatggggacacggaacatatggtgtactttgcc
gtgatcatgcaggactatgagcgggtggtggcataccactgccagcacgaggcctacgag
gaagccctggctgtgcttgctcgccaccgtgacccccagctcttctataagttctcaccc
atcctcatccgtcacattcctcgccagctggtagatgcttggattgagctgggcagccgc
ctggacgcccggcagctcatccctgccctggtgaactacagccagggtggtgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaatgtgctgggcgagactgag
caggctattcacaattacctgctgtcgctctatgcccgaggccagcctgcctcactgctg
gcctaccttgagcaggcaggggccagcccacaccgtgtgcattacgacctcaagtacgcg
ctgcggctttgtgctgagcacggccaccaccgtgcttgtgtccacgtctacaaggtccta
gagctgtatgaggaggccgtggacttggccctgcaggtggatgtggacctggccaaacag
tgtgccgacttgcctgaggaggacgaggaactgcgtaagaaactgtggctgaagatcgct
cggcacgtggtgcaagaggaggaagacgtgcagacagccatggcctgcctggccagctgc
cccctgctcaagattgaggatgtgctgcccttctttcctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcgctcagggcctacaaccaccacatccaagagctgcag
cgggagatggaggaggccacagccagtgcccagcgcatccggcgagacctacaggaactg
cggggccggtatggggcagtggagccccaggacaagtgcgccacctgcgacttccccctg
ctcaaccggcctttttaccttttcctctgtggccacatgttccatgctgactgcctgctg
caggctgtgcggccgggcctgcccgcctacaagcaagcccggctggaggagctgcagcgg
aagctgggagctgctccggcccctaccaagggctccacccgtgccaaggaggccgaggca
ggggcagccacagcggggcccagtcgggagcagcttaaggctgacctggatgaactggtg
gcagctgagtgcgtgtactgtggggagctgatgatccgctccattgaccggcccttcatt
gacccccagcgctatgaggaggagcacctcagttggctgtag
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