Vulpes lagopus (Arctic fox): 121486111
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Entry
121486111 CDS
T07435
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vlg03016
]
121486111 (TARBP1)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121486111 (TARBP1)
Enzymes [BR:
vlg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
121486111 (TARBP1)
Transfer RNA biogenesis [BR:
vlg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121486111 (TARBP1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121486111 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
121486111
NCBI-ProteinID:
XP_041602793
LinkDB
All DBs
Position
3:complement(83340707..83424061)
Genome browser
AA seq
1607 aa
AA seq
DB search
MECVLAEALLSQSRDPRALLAALCRGEASAERVETLRFLLQRLEDEAARGGGGAGPLPEA
AREVAAGYLVPLLRGLRGRPGGGPERRRVLRAAGAALRSCARLAGGPQLAATLAEEALRD
LLAAGPAPGAEAAVEVLAAVGPCLRPREDGPLLERVARAALGLALGVDGAGAGAGRAEDA
AALAAGRLLPALGQCGGAALRAVWGGLVAAGAPSGPGRVGPQLLVLSALAERLLPEPGAG
RGPRAREEGPDARRCWRFWRTVQAGLAQAQDALTRRRARYLLQRAVEVSAELGAPCACGP
QEGTGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLKSLFEYAVSEED
GCWLFHPSWHMCIYKRMFESENKILTKEGVIHFLELYETKILPFSPEFSEFIIGPLMDAL
SESSLYIRSPGQLIGSGSPLGLKLQKFLVTYVSLLPEEIKSSFLLKFIQKMTSRHWCGIP
ILFLSKALANVPRCKALGVDGLLALRDVLQCTMITHQILLRGAAQCYLLQTAMNLVDVEK
VSLSDVSTFLMSLRQEESLRRGTSLWTELCDWLRVNESCFRHASACSSIGLPETSSLNAY
VKNLVQECIKSPSWETGEDRFMPDWFEAKLVAMMVLLAVDVEGMKSQYSEKRRTQNVLRI
FLDPLLESLMKFGTNAYMPLLKTDRCLQLLLKLLHTCMLKGSSTQDDEVFTLLQSFVLST
TESVSEFILRRLTMNELSSVSDLDRCHLYLMVLTELINLHLKVGWKRGNPIWRVISPLKN
ASIQHLQELDSGQDPTLARQIQRVVSMAALAMVCEAIDQKPELQLDSLDAGPTERFLSSF
PLNCTLQKPHAEEQSSSFEESSASQGWGKIVAQYIHDQWICLSFLLRKYHTLIPASEGEV
LEPILPAIQMPVRTLQAALEALTVLPSDQVLPVFRCMKILVPKLLTSSESLCVESFDTAW
KIISALSNTQLIFWSNLKAFVQFVFDTKVLTIAAKIKGQAYFKIKEIMYKIIEMSAIKTG
VFNTLISYCCKSWIVSASDVPQVSLSSAKNYSELVLEACIFGTVFRRDQRLIQDVQTYIE
NLGHDCAANMVIENTKREDHYVRICAVKFLCLLHGSNVSHKLFMEDLAIKLLDKDDLVSK
CRTRYYVNSQQHRVKNRIWQTLLVLFPSFDQNFLNRIIDKIFQAGFINNQASIKYFIEWI
IILILHKFPQFLLKFWDCFSYGEENLKTSICTFLSVLSHLDIITQNIPEKKPILKQALII
VLQWCFNHNFSIRLYALVALKKIWSMCKTLNMEEFNALTSVIESSLNEVENMPGAGNAKK
NWQRIQEHFFFATFHPLQDYCLETIFYIFPRLSGLVEDEWIAIGKFTRFTDIPLDAGFQW
YLSPTHLCELKPGDWAQQDIGSHSGEADSQSEWTDVQKKIIPWKNSAPDLDLEVVFQDRV
ARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASALIVDSLQCVRDKQFQSLSVSAEQ
WLPLVEVKPPQLIHFLQQKKAEGYTVIGVEQTAKSVDLTQYSFPERSLLLLGNEREGIPA
NLIQELDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLRHEDTES
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgtcctcgccgaagcgctgctgtcgcagagccgcgacccccgggcgctgctc
gcggcgctgtgccgcggggaggcgtccgcggagcgcgtggagacgctgcgctttctgctg
cagcggctggaggacgaggcggcgcgcggcggcgggggcgcggggccgctcccggaggcg
gcgcgcgaggtggcggccgggtacctggtgccgctgctgcggggcctgcgcgggcgcccc
gggggcggccccgagcggcggcgcgtgctgagggctgcgggcgccgccctgcgctcctgc
gcccgcctcgccgggggcccgcagctggcggccacgctggcggaggaggcgctgcgcgac
ctgctggccgcgggccccgcgcccggcgccgaggcggccgtggaggtgctggcggccgtc
gggccctgcctgcggccccgcgaggacgggccgctgctggagcgggtggcgcgggccgcc
ctgggcctggcgctgggcgtggacggggccggggccggggccgggcgcgcggaggacgcg
gcggcgctggcggccgggcggctgctgccggcgctgggccagtgcggcggggcggcgctg
cgggccgtctggggcgggctggtcgcggccggggcgccctcgggcccgggccgcgtcggg
ccgcagctgctggtgctgagcgccctggccgagaggctgctgcccgagcccggcgccggc
cgcggtccgcgcgcgcgcgaggagggcccggacgcgcggcgctgctggcgcttctggagg
acggtgcaggcggggctggcccaggcccaggacgccctgacgcgcaggcgcgcgcgctac
ctcctgcagagggcggtggaggtgtcggcggagctgggggccccctgcgcctgcgggccc
caggaaggaaccggcccaagtctgttttggtggtctgagaagaaaaaggatgagctttta
aagttttgggaaaactatattctaattatggaaactctagaaggaaatcagatccatgtt
ataaagccagttttaccgaagctgaagagtctatttgaatatgcagtgtcagaggaagat
ggatgttggctgtttcacccatcctggcacatgtgtatttataaaagaatgtttgaaagt
gaaaataaaatcctgaccaaagaaggtgttatccattttttggagctgtatgaaacaaag
attcttccattttcaccagagttttctgagtttatcattggaccactaatggatgcactt
tcagaaagctctctgtacatcaggtccccaggccagctgataggaagtggttctccgttg
ggactgaaattgcagaagtttttagtcacttatgtttctcttcttccagaagaaataaag
agtagtttcctcttaaagtttattcagaagatgacaagtagacattggtgtggcattccc
attttgtttctgtctaaggctttggcaaatgtcccaagatgtaaagccctgggtgtagac
gggcttcttgctctcagggatgttcttcagtgcactatgatcacccatcagattctgctg
agaggggcagctcagtgctatcttcttcaaacagctatgaatttagtagatgtggaaaag
gtgtcactttctgatgtttcaacttttctcatgtctctgagacaagaggagtccttaaga
cgaggaacctcactgtggacagagctctgtgattggttgcgtgttaatgaaagctgtttt
aggcatgcctcggcttgtagctccattggacttcctgagacatcctctttaaatgcttac
gtgaagaacctagttcaagagtgtattaagtcaccttcttgggaaacaggagaagaccgc
tttatgcctgactggttcgaagccaagctagttgcgatgatggtcttattggctgtagat
gtggaaggaatgaaatctcagtatagtgaaaagcggagaacacagaatgtattaaggata
ttcttagatcctcttctggaatcccttatgaagtttggtacaaatgcctacatgcccttg
ctgaaaactgacagatgcctccagttgctgttgaagttattgcacacttgcatgttgaaa
ggttccagtacccaagatgatgaagtgttcacgcttcttcagagctttgtcctgtctact
accgaaagtgtttccgaatttatcctccgacggctcactatgaatgaactcagtagtgtt
tcagatctggatcgttgccatttatacctgatggtattaactgagcttataaatctccat
ttgaaggttgggtggaaaagaggcaaccccatttggagagttatttctcctctgaaaaat
gcatccattcagcatcttcaggagttggacagtggacaggatccgacacttgcaaggcag
atccagagggttgttagtatggctgctttggctatggtgtgtgaggccattgatcagaag
ccggaactacagctcgactctctggatgctggacctacagaaaggttcctctcctctttc
ccgctcaattgtacactgcagaagccccatgcagaggagcagagcagttcctttgaagaa
tcatcagcttcccaaggatgggggaaaatagttgcacagtatatccatgatcagtggatt
tgcctgtctttcttgctgaggaaatatcacactctgataccagcgtcagagggtgaggtt
ctggaacccatcctgcctgctattcagatgccagtccggactttgcaggctgcgctagag
gccctcacagtactgccttcagatcaagtcttgcctgtgttccgctgcatgaaaattctg
gttcccaagcttttgacctcctctgaatcactttgtgtagagtcttttgacacggcttgg
aaaattatatctgccttaagcaatactcagctgatattctggtctaatttaaaagctttt
gttcagtttgtttttgataccaaagttcttaccattgctgcaaaaatcaagggccaggca
tatttcaaaataaaagagattatgtacaagataattgaaatgtctgctataaaaactgga
gtcttcaatacactgataagttattgctgcaaatcttggatagtttctgcttcagatgtg
ccccaagtatctttatcaagtgctaaaaattatagtgaacttgtcctggaggcttgtata
tttggaactgtgtttaggcgtgatcaaagacttattcaggatgtacagacctacatagaa
aatcttggacacgattgtgcagcaaacatggttattgaaaatactaaaagagaagaccac
tatgtgagaatttgtgctgtcaaattcctgtgtttgttacatggctcaaatgtatctcat
aagttgtttatggaagatcttgcaatcaagctattagataaagatgacttggtgtccaag
tgcaggactcggtactatgtgaactcccagcagcaccgggtgaagaaccgaatatggcag
acgctgctggtgcttttccccagcttcgatcagaatttcttgaatagaattattgacaag
attttccaggctggtttcatcaataatcaagcatccataaaatattttatagaatggatt
attatattgattcttcataaattccctcaatttcttctgaagttctgggattgtttttct
tatggtgaagaaaaccttaaaacgagcatttgtacatttttatcagttttgtcacatttg
gacatcatcactcagaatattccagaaaagaaaccaattctgaagcaagcccttattatc
gtcctgcagtggtgttttaatcacaattttagtattcgactgtatgccttagtggctctt
aagaagatctggagcatgtgtaagacactgaacatggaagaatttaatgctttgacttct
gttattgaatccagtcttaatgaagtggaaaacatgcctggagcagggaatgccaagaag
aactggcaacgcatccaagagcatttcttttttgcaacgtttcacccccttcaagattac
tgtctggagaccatattttacatctttccacgcctttcaggcctggttgaagatgaatgg
atcgccattggtaaattcaccagattcacggatatccctttggatgcaggatttcaatgg
tacctttctccaactcacctttgtgaactaaaaccaggtgactgggctcagcaggacata
ggctctcactcaggagaagcagatagccaatcagaatggactgatgttcagaagaagatt
atcccctggaaaaacagtgctccagatttagatctggaggtagtatttcaggatcgtgtt
gccagacttggaaagtcaattagcagactgattgtagtggcctcgctcattgataagcca
actaatttaggagggctatgccggacctgcgaggtgttcggggcatcggcgctcattgtg
gacagcctgcagtgcgtcagagacaaacagttccagagcctcagtgtttcagcagaacag
tggcttcctttagtagaggtgaaaccacctcagctcattcattttctgcaacagaaaaaa
gcagaaggttacactgtcattggtgtggagcagactgccaaaagtgtggacctgacgcaa
tacagctttccggagagatctctgctcttgttaggaaatgaacgtgagggaattccagcc
aatctgatccaggaattggatgtttgtgtggaaattcctcagcagggcattatccgctca
cttaacgtccatgtgagtggggctctcctgatttgggaatataccagacagcagctgctt
aggcatgaggacaccgagtcatga
DBGET
integrated database retrieval system
