Vulpes lagopus (Arctic fox): 121486163
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Entry
121486163 CDS
T07435
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
121486163 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121486163 (JMJD1C)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121486163 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
121486163
NCBI-ProteinID:
XP_041602874
LinkDB
All DBs
Position
3:73189055..73514584
Genome browser
AA seq
2546 aa
AA seq
DB search
MATAVETRLELVGKRFLCVAAGEEARPERRDSGRRWRGWRAGVIRAVSHRDSRNPDLAVY
VEFDDLEWDKREWVKVYEDFSTFLVEYHLIWARRVDPSQTQGSKNKQIQWPALTFKPLVE
KSIPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWVKEQKV
QEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMV
QMTFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHSHYTRAQANSPRPAMNSQAALPKQ
NTHQQQQQRNTRPSKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKNKQLLNKRRKPEED
EKKLHMKRLRTDNVSDFSESSDSENSNKRMINNSSEPKPENELKNKNTSKINGEEGKSQN
NEKVGEETLIIDSQPPWDQVQEDKKREEAEKQKSVDSQLQEKMIIHSSEQATLSDHNPND
LLLQECNIEKTHTVELLPKEKFVSRPPTPKCVIDITNDTNSEKVAQENSSTFGLQTLQKM
DPNISDSKHSIANAKYLETAKQDSDQSWVSDVVKVDLTQSNVRSTSSGNDHLNMEKEKNQ
YVSYMSSLNAVSITEDKLHKRSPPPETIKSKLNTSVDAHKTKSNPSPEVIKPKVTHSPDS
VKSKATYVNSQATGERRLANKIEHELSRCSFHSVPIRGNTLEATKSPLIIDKNEHFTVYR
DPALVGSETGANHISPFLNQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLP
TINTHPLTSGPHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQ
LLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAESS
LRRNSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRSLKITAHSSPPLTKSLIDHHK
EELERKAFIEPLRSVASTSAKNDLDLNRSQTGKDGLLHRHFVDPVLNQLQRQPQETGERL
HKYKEEHRRILQESIDVAPFTTKIKGLEGERDNYSKVALSSSSPKSHVIIKQDKDIECSV
SDLYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQSNTVAAAANPQT
LTSFISSLSKPPPLIKHQPESEGLAGKIPEHLPHQIASHSVTTFRNDCRSPTHLTVSSTN
ALRSMPALHRAPVFHPPIHHSLERKEGNYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIP
EPKDSQANFKSSSEQSLSEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSSTKL
ESVPAMQLASKDRVSERSSTGANQTDCLKPAEAGETGRIILPSVNSDSAHIKSEKSVQAV
SQGSVPSSVMSAVNTVCNTKTDVFTSAATTTSVSSWGGSEIIYSLSNTILASKSLECTSS
KSVSHSVAQMQECRVSTTAPVTPASSQTGSAVQPSPGFSGTTDFIHLKKHKAALAAAQYK
SSNVSETEPNAVKNQTSSTSLLLDSTVVCNTINKANSVGNGQASQTTQPNYHTKLKKAWL
TRHSEEDKNTNKMENSGNSVAEIIKPCSVNLIASTSNDIQNSVDSKIIVDKYVKDDKVSR
RKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEVEEDLKPNGVLS
RSAKEKSKLKLQSNSNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCREC
RLIRSKKGEEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYED
DELDVETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLF
NIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLT
DLLDVMHTLREKYGIKSHCHCTNKQNIQVGNFPAVNGVSQVLQNVLNHSNKISLCMPESQ
QQNNPQNSESNGNSSPGSDISTDSKLTPPESQSPLHWLADLAEQKSREEKKENKEFALEK
QIKEEREQDNPDSPNSRTSPPASQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSM
GTPSGKSGRTMPNILDDIIASVVENKIPPNKASKINVKPELKEEPKESRKSSMEENKKLY
SDIPHSWICEQHILWLKDYKNINNWKLFKECWKHGQPAVVSGVHKKMNISLWKAESISLD
FGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMM
PARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTN
LHVEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIY
AGKDIDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFL
GDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKN
ILYHAVKEMVRALKIHEDEVEDMEEN
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcggtggagactcgtctggagctggtggggaagcggttcctgtgcgtggcg
gccggcgaggaggctcggccggagcgccgggacagtggacggcgctggcggggctggcga
gcgggggtcatccgagccgtgtcccaccgggacagccgcaacccagacctggcggtgtat
gtggaatttgatgaccttgaatgggataaacgagagtgggttaaagtatatgaagatttt
tcaactttcttggtggaataccacttaatctgggccagaagagtcgaccctagccagact
cagggatcaaagaacaaacaaattcagtggcctgcattgactttcaaacccctggttgaa
aaaagtatacccagttcaatcactgcggtagaattccttgtagataaacaactggatttt
ttaactgaagatagtgcctttcaaccctaccaggacgacatagacagcctaaacccagtt
ctcagggacaacccgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaggtt
caggagatttttatgcaaggtccttattccttaaatggatacagagtgagagtatataga
caagactctgccacccagtggtttactggcataattactcatcatgatctcttcactcgc
accatgatcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggtt
caaatgacctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcatt
acatcacggcgaaggtctcgtgccagtcaaaatagcaacacagttcacagtcattataca
cgtgcccaagcaaatagtcccagaccagcaatgaactcccaagctgctctaccaaaacag
aatacacaccagcaacagcaacaaagaaatactcgtccaagtaagaggaagggctcagat
agcagtataccagatgaagagaagatgaaggaggaaaagtatgattatatagcacgagga
gaaaaccccaaagggaaaaacaaacagttgctgaataaaagaaggaaacctgaggaggat
gaaaagaaactacatatgaaaagactacgaaccgacaatgtttcagacttttctgagagc
agtgactcagaaaattcaaataaaaggatgataaataattcctcagagccgaagccagag
aatgagttgaaaaataaaaacacttcaaagataaatggagaagaaggaaaatcccagaat
aatgagaaggtaggagaagagacactaataatagatagccagcctccctgggatcaagta
caggaagataaaaaacgtgaagaagcagagaaacagaagtctgttgactctcagcttcaa
gaaaaaatgattattcattcatcagagcaggccacactttctgatcataatcctaatgat
ttacttcttcaggaatgcaatatcgaaaaaacacacacagtggaattactaccaaaggag
aagtttgtatctagaccacccacaccaaaatgtgttattgatattacaaatgacactaat
tcagaaaaggtggctcaggaaaactcaagtacctttggccttcagacacttcagaaaatg
gatcctaatattagtgattcaaaacattctattgcaaatgcaaaatacttagaaacagca
aagcaagattctgatcagagctgggtcagtgatgtagttaaagtagatttaacccaatca
aatgttagaagtacttcctcaggaaatgatcatctgaatatggaaaaagagaaaaatcag
tatgtctcttacatgtcttctctaaatgcagtttctatcacagaagataagctacataag
cgaagcccacccccagagaccataaaatctaaacttaatacttcagtagatgctcacaag
acaaaatcgaatccctcacctgaagttattaaacccaaagttacccattctcctgattct
gtaaagtctaaggccacttatgtgaatagccaagccactggtgaaagaagactagcaaat
aagatagaacatgagttatcaagatgcagttttcattcagttcctattcgaggcaataca
ttggaagctacaaagagcccgcttatcattgataaaaatgagcatttcacagtttacaga
gatcctgcacttgttgggtcagaaacaggagctaaccacatttcacctttcttaaaccag
catccctttcctcttcattcttcatcccatagaacctgtttaaatccaggtacccatcac
cctgccttaactcctgcaccccacttacttgccggatcatccagtcaaactccattacct
accattaacacacaccctcttactagtggtccacaccattctgttcatcacccccattta
cttcctgccgtgttacctggagtgcctactgcctccctacttggtggccacccacgacta
gagactgctcatgccagcagcttgagccacttagcattagcacaccagcaacagcaacag
ttgttacagcaccagtcacctcatcttcttggacaagcccatccttctgcttcatataat
cagcttggactttatccaattatttggcaatatccaaatggaacacatgcgtactcagga
cttggtctaccttcctcaaagtgggttcacccagaaaatgcagttaatgctgaatcttca
ttaaggaggaattctcccagtccttggttacatcaacctacccctgtgacctcagcagat
ggtattggattacttagtcacattcctgtcagaccttccagtgcagagcctcatcggtct
cttaaaattacagcacattccagtccaccattgacaaaaagtttaatagatcaccataaa
gaagaattggagaggaaagcttttatagaaccattacgttctgttgcatccacatcagca
aaaaatgacctggatctaaatagatcacagactggaaaagatggtctattgcatagacat
tttgtggatcctgtattgaatcaattacagagacaaccccaggagactggagagagatta
cacaaatataaggaggaacatcgtcgaatccttcaagaaagtattgatgttgctcccttt
acaactaaaatcaaggggcttgagggtgagagggacaattattccaaagtagcattgtca
tcttctagccctaaaagccatgtcatcatcaaacaagacaaagacatagaatgctcagta
tcagatctttataaaatgaagcactctgtgcctcagagtttgccccaaagtaactatttc
actacattgtctaatagtgtggtcaacgaaccaccaaggtcatatccatccaaagaggtt
tcaaatatttacactgaaaaacagagtaatactgttgctgcagcagctaatcctcaaact
ctgacttcatttatatcgtctctttcaaagcctccacctttaattaaacaccaaccagaa
agtgaaggtttagcaggaaagattccagaacatcttccccatcagattgcttctcactca
gtaacaaccttcagaaatgattgtaggagtcctacccatttgacagtttcttctacaaat
gcactccggagcatgcctgctttacatagagcaccagtatttcatccaccaatccatcac
agcttggaaagaaaggaaggcaactatagtagtctttcccctccaactctaaccccagtg
atgcctgtaaatgctggtgggaaagttcaagaatcacaaaagcctccaactctaattcca
gagccaaaagactctcaggcaaattttaagagttcttctgaacagagtttgtcagaaatg
tggaaatctaataataacctcagcaaagaaaaagctgaatggcatgtggagaaaagcagt
ggaaagtcacaggctgctatggcatctgtcattgtacgtccaccatctagtacaaaactt
gagagcgtgccagcaatgcagttagcttccaaagatcgagttagtgaaagatcttcaact
ggggcaaatcaaacagattgcctcaaaccagcagaagctggagagactggaagaatcatt
ctgccaagtgtgaattcagatagtgctcacataaaatctgaaaaaagtgtccaggctgtc
tcacagggcagtgttcccagttcagtcatgtctgctgtaaatacagtgtgtaataccaaa
acggatgtattcacatctgctgccactaccactagtgtttccagctggggtggttcagaa
ataatttactctttatcaaataccattttggcctctaaatccttagaatgtacctcttca
aaaagcgtcagtcattcagtggctcaaatgcaagaatgcagggtcagcaccacagctcca
gttacaccagccagtagtcagacaggaagtgctgttcagcccagccctgggttctcaggc
acaactgattttatccatttaaaaaagcacaaggcagcattggctgcagctcagtataaa
agtagtaatgtcagtgagactgagcctaatgctgtgaaaaatcagacatcttcaacctcc
cttctcttggatagcactgtagtctgtaatacaataaacaaagcaaactctgtaggaaat
gggcaagcatcccagacaactcaacctaactaccatactaagctgaaaaaggcctggctt
actagacactcagaggaagataaaaatactaataaaatggaaaattcagggaattctgta
gcagaaattattaagccatgttctgtcaatttaatagcctcaacatctaatgatatacaa
aatagtgtagatagtaagattatagttgataaatatgtaaaagatgataaagtcagtagg
agaaaagccaaaaggacttatgaatctggctctgaaagtggagactcagatgaaagtgaa
agcaagtcagagcaaaggactaagaggcaacctaagccaacttacaaaaagaagcagaat
gatttgcagaagagaaaaggtgaagtagaagaagatttaaaacccaatggggttctcagc
aggagtgccaaagaaaaaagtaaattgaaattacagagcaacagtaatagtgctggcatc
cctcgttcagtattaaaagattggcgtaaagtcaagaagctgaagcaaactggggaatcc
tttttacaggatgactcctgctgtgagatagggcctaatttgcaaaagtgccgggagtgt
agacttattcggagtaaaaaaggagaagaaccagctcattcaccagtgttctgtagattt
tactactttagacgattgtcatttagtaaaaatggagtggtcagaatagatggtttctct
tctcctgaccagtatgatgatgaagccatgagcttatggacacatgaaaattatgaagat
gatgaactagatgtagaaacttcaaaatacatcttggatatcataggtgataaattctgt
cagttagtaacgtctgaaaaaacagctttgtcctgggtgaaaaaggatgccaaaattgcc
tggaagagagcagtgagaggagtccgggaaatgtgtgatgcatgtgaagcaacattgttt
aacattcattgggtctgccaaaaatgtggatttgtggtctgcttagattgttacaaggca
aaggaaagaaagagttctagagataaagaactgtatgcttggatgaagtgtgtgaaagga
caaccgcatgatcacaaacatttaatgcctactcaaattatacccggttctgttttgaca
gatcttctagatgtgatgcatacccttagagaaaaatatggtattaaatcccattgtcat
tgcactaacaaacaaaatatacaagttggaaattttcctgcagtgaatggtgtatctcaa
gttttacagaatgttcttaatcacagtaataaaatttctctgtgcatgcctgagtctcag
cagcaaaataaccctcagaattctgagagtaatggcaatagcagccctgggagtgacata
agcacagacagcaagttaactcctccagaatcccagtcaccactgcactggttagcagat
cttgcagagcaaaagtccagagaggaaaaaaaagaaaacaaagaatttgcccttgaaaag
caaattaaagaagagagagaacaagacaaccctgattctccaaatagcagaacatcacct
cctgcatcccagaataatgaacagggttcaactttacgagatttgctgaccacaactgct
ggcaagctacgtgtgggttctacagatgctggcattgcctttgccccagtgtattcaatg
ggaaccccaagtggcaaaagtggaaggactatgccaaatattcttgatgacataattgct
tcagttgttgaaaacaaaattccaccaaataaagcctctaagataaatgtaaaaccagag
cttaaagaagagcctaaagagagcagaaaatcatccatggaggaaaacaaaaaattgtac
agtgacataccacattcttggatctgtgagcagcatattctgtggcttaaggattataaa
aatattaataattggaagcttttcaaagagtgttggaaacatggacaacctgcagtggtt
tctggtgtgcataagaaaatgaacattagcttgtggaaggcggaatcaattagtcttgat
tttggagaccaccaagctgatctcctgaactgcaaagacagcataatttcaaatgccaat
gttaaggaattctgggatggttttgaagaagtttcaaaacgacaaaaaacaaaaagtgga
gaaacagttgttttaaaattgaaagattgcccttcaggagaagacttcaagactatgatg
ccagcaagatatgaagatcttttaaaaagtctgccattgccagaatattgtaatccagaa
ggaaaatttaacttggcctctcatttgccaggattttttgtacgccctgatctaggaccc
agattgtgcagtgcctatggtgtagctgctgctaaagatcatgacataggaacaacaaat
ctccatgttgaagtttctgatgttgtaaatattctagtctatgttggcatagcaaaggga
aatggcattctctcaaaagcaggaatactcaagaaatttgaggaagaagatttggatgac
attttaagaaaacgattgaaggactcaagtgaaatacctggtgctctgtggcatatttat
gcagggaaagacattgataagataagggaatttcttcaaaagatttcaaaagaacagggc
cttgaagttctaccagaacatgatccaatacgtgaccaaagttggtatgtgaacaaaaag
ctccgccaaagactacttgaggaatatggagtcagaacctgtactcttattcaattcctt
ggtgatgccattgtcttaccagcaggagcacttcatcaggtacagaattttcacagctgt
attcaggtaactgaagattttgtgtctccagaacatcttgtacagtcatttcatttaaca
caggaactgagacttttgaaggaggaaatcaattacgatgataaactacaggttaaaaat
atactgtatcatgcagtcaaggaaatggtgagagctttgaagatacatgaagatgaagta
gaggatatggaagaaaactag
DBGET
integrated database retrieval system
