Vulpes lagopus (Arctic fox): 121486275
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Entry
121486275 CDS
T07435
Symbol
TRIM4
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM4
KO
K11998
tripartite motif-containing protein 4 [EC:
2.3.2.27
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121486275 (TRIM4)
Enzymes [BR:
vlg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121486275 (TRIM4)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121486275 (TRIM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
PRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
zf-Nse
BBS1
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
121486275
NCBI-ProteinID:
XP_041603065
LinkDB
All DBs
Position
3:100267300..100283794
Genome browser
AA seq
475 aa
AA seq
DB search
MEAEDLQEDLTCSICLDYFEEPVSIECGHNFCRGCLHRSWAPGGGSFPCPECRHLSPPAS
LRPNWALARLTEKTRRRRQGPVPPGQCGRHREALRLFCEEDQRPVCLVCRESQEHQAHTM
APIDEAFSSYRDKLCKTQCSLKDKIKKAMHLQDMEVKNAAEWKEKVKSQRMRLSVEFAKL
HLFLTEEEQLFLQRLSEEEEEMNKKHDENMLKLHQIITSLKQLILEIREKSQSSTLVLLQ
NPKDVLNRSENQDVNYSPEILKMKTVCQIPMMKEMLKQFQVAVSLAVDTAHPKLVFSQDG
RYVKNGASASSWPLFSSAWSYVSGWRNPQKNTAFVERFQHLPCVLGKNVFISGRHYWEVE
NRDSLEIAVGVCREDVMGLADGSKMSPHVGIWAICWSSAGFWPLTSSPVSPTKQEPALHR
VGVFLDSGAGDISFYSAVDGTHLHTFSCPLVSCLRPFFWLSPLASLVIPAVTGGK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgaggacctgcaggaggacctgacttgctccatctgcctggactatttcgag
gagccggtgtccatcgagtgcggccacaacttctgccgcggctgcctgcaccgcagctgg
gcgccgggcggtggctcgttcccctgccccgagtgccgccatctgtcgccgcccgcctca
ctgcggcccaactgggccctggcccggctgacggagaagacgcggcgccgccgccagggc
cccgtgccccccggccagtgcggccgccaccgggaagcgctgcggctcttctgcgaggaa
gaccagcggcccgtgtgcttggtgtgcagggagtcccaggagcaccaggcgcacaccatg
gcgcccatcgacgaggccttcagcagctaccgggacaagctttgtaagactcagtgtagt
ctgaaggacaagataaagaaagctatgcatttacaggacatggaagtgaagaatgctgcc
gagtggaaggagaaggtgaagagtcagcgaatgagactcagcgtagagtttgcaaaactg
cacctcttcctgactgaagaagaacaactatttcttcagagactaagtgaggaagaagaa
gagatgaataagaaacacgatgagaacatgttaaagctccatcagataatcacttccttg
aagcagctcatcttagagatcagagagaagagccagagctccaccctcgtgttgcttcag
aatccaaaagatgtgttgaacaggagtgagaaccaggatgtgaactattcccctgaaatt
ctaaagatgaagactgtgtgccagataccaatgatgaaggaaatgctgaagcaattccaa
gtggctgtaagtctagctgtggatacagctcatcccaaacttgtcttctcccaggatggg
agatacgtgaagaatggagcatcagccagttcttggccattgttttcttcagcgtggagc
tacgttagtggatggaggaaccctcagaagaacacagcgtttgtggaaagatttcagcac
ttaccctgtgttttgggaaaaaacgttttcatttcagggagacattactgggaagttgag
aaccgagatagcctggagattgctgtgggggtgtgtcgggaggacgtcatggggcttgca
gatggttcaaaaatgtccccccatgtaggaatctgggctatttgttggagttctgctggc
ttttggcccctaacaagctctcctgtaagtcctaccaagcaagagcctgctcttcaccgg
gtgggggttttcctagattctggggctggggacatctccttctacagtgctgtagatggc
acgcatctccacaccttctcttgccctctggtctcctgcctccggccatttttttggttg
agtccattagcatctttagtcatcccagcagtgactggtgggaaatga
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