Vulpes lagopus (Arctic fox): 121486392
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Entry
121486392 CDS
T07435
Symbol
HCN1
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
121486392 (HCN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vlg04040
]
121486392 (HCN1)
Ion channels [BR:
vlg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
121486392 (HCN1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
121486392
NCBI-ProteinID:
XP_041603177
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All DBs
Position
3:complement(23214483..23597530)
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AA seq
895 aa
AA seq
DB search
MEAGGKPNSSSGSRDDGSSAFPGKAPATGAGPAAAEKRLGTPPGGGAGAKEHGNSVCFKV
DGGGGGAGEEPAGGFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQER
VKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDTVF
LLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMDSE
VYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMML
LLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQAP
VSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAD
MRQKIHDYYEHRYQGKIFDEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFVTA
MLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLTK
GRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQKFQ
KDLNTGVFNNQENEILKQIVKHDREMVQAIAPISYPQMTALNSTCSAATPPSRARTQSPP
VYTAPSLSHGNLHSPSPSTQTPQPSAVLSPCSYTTAVCSPPVQSPLAARTFHYASPTASQ
LSLAQQPQPAQPAQPPQPAQPAQPPQPQPAQPQPQPPQPPQTPGSATPRNDVHRSTQALH
NASLSREVRPLSASQPSLPHEVATLMSRPHPTVGESLASIPQPVTAVHGPGLQAGGRGTV
PQRVALFRQMSSGAIPPNRAAPPAPPPPAAALPREPSSVLTADPEAEKPRFASNL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaagccggcggcaagcccaactcctcgtccggcagccgggacgatggcagcagcgcc
ttccccggcaaggcgcccgcgacgggcgcggggccggcggcggccgagaagcgcctgggc
acccctccgggcggcggggcgggcgcgaaggagcacggcaactcggtgtgcttcaaggtg
gacggcggcggcggcggcgcgggcgaggagccggccgggggcttcgaggacgccgagggc
ccccggcggcagtacggcttcatgcagaggcagttcacctccatgctgcagcccggggtc
aacaaattctccctccgcatgttcgggagccagaaggcggtggagaaggagcaggaaagg
gttaaaactgcaggcttctggatcatccacccttacagcgatttcaggttttattgggat
ttaataatgcttatcatgatggttggaaatctggtcatcataccagttggaatcacattc
tttacagaacaaacaacaacaccatggattattttcaatgtggcatcagatacagttttc
cttttggacctgataatgaattttaggactggcactgtcaatgaagacagttctgaaatc
atcctggaccctaaagtgatcaagatgaattatttaaaaagctggtttgtggttgacttt
atctcatcaatcccagtggattatatctttctcattgtagaaaaaggaatggattcagaa
gtttacaagacagccagggcacttcgcattgtgaggtttacaaaaattctcagtctcttg
cgtttattacgactttcaaggttaattagatacatacatcagtgggaagagattttccac
atgacttatgaccttgccagtgcagtggtgagaatatttaacctcatcggcatgatgctg
ctcctatgccactgggatggctgtcttcagttcttagtaccactactgcaggatttccca
ccagattgctgggtgtctctgaatgaaatggttaatgattcatggggaaagcagtattca
tatgcactcttcaaagctatgagtcacatgttgtgcatcgggtatggagcccaggcccca
gtcagcatgtctgacctctggattaccatgctgagcatgattgttggggccacctgctat
gccatgtttgttggccacgccacagctttaatccagtctttggattcctcaagacggcag
tatcaagagaagtacaaacaagtggaacaatacatgtcattccataagttaccagctgat
atgcgtcagaagatacatgattactatgaacacagataccaaggcaaaatctttgatgaa
gaaaacattctcaatgaactcaatgatcctctgagagaggagatagtcaacttcaactgt
cggaagctagtggctacaatgccactgtttgctaatgcggatcccaattttgtgactgcc
atgctgagcaagttgagatttgaggtgtttcaacctggagattatatcatacgagaagga
gctgtgggtaaaaaaatgtatttcattcaacatggtgttgctggtgtcatcacaaaatcc
agtaaggaaatgaagctgacagatggctcttactttggagagatttgcttgctgaccaag
ggacgccgtactgccagtgttcgagctgatacatattgccgtctttattcactttctgtg
gacaatttcaatgaggtcctggaggaatatccaatgatgaggagagcctttgagacggtt
gccattgaccgactagatcggatagggaagaaaaattcaattctcctgcagaagttccag
aaggatctgaacaccggtgtgttcaacaatcaggagaacgagatcctgaagcagattgtg
aagcacgaccgggagatggtgcaggccatcgctccgatcagctacccccagatgacagcc
ctgaactccacctgctccgccgcgactccgccctcccgcgcccggacgcagtccccgccg
gtgtacaccgcgcccagcctgtcccacggcaacctgcattcccccagccccagcacccag
accccgcagccctccgccgtgctgtcgccctgctcctacaccaccgcggtgtgcagcccg
cccgtccagagcccgctggccgctcggactttccactatgcctcccccacggcgtcccag
ctgtcgctcgcgcagcagccgcagcccgcgcagcccgcgcagcccccgcagcccgcgcag
cccgcgcagcccccgcagccgcagcccgcgcagccgcagccgcagcccccgcagccgccg
cagacgcccggcagcgccaccccgaggaacgacgtgcacaggagcacccaggcgctccac
aacgccagcctgagccgcgaggtcaggcccctgtcggcctcgcagccctcgctgccccac
gaggtcgccacgctcatgtccagaccgcaccccactgtgggcgagtccctggcctccatc
cctcagcccgtgacagctgtccacggcccggggctgcaggcggggggcaggggcaccgtc
ccccagcgagtcgccctgttccgacagatgtcctcgggagccatccccccgaaccgagca
gcgccccccgcgccccctccaccagcagcggctctccccagagagccttcctcagtctta
actgcagacccagaggccgaaaagccacgatttgcttcgaatttatga
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