Vulpes lagopus (Arctic fox): 121486598
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Entry
121486598 CDS
T07435
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vlg03037
]
121486598 (IFT140)
Cilium and associated proteins [BR:
vlg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
121486598 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_HPS5
WD40_Prp19
WDR55
TPR_IFT80_172
Beta-prop_CAF1B_HIR1
TPR_GEMI5
TPR_COPA_B
Beta-prop_WDR75_1st
Clathrin
RNase_HII
WD40_MABP1-WDR62_1st
EIF3I
Consortin_N
Motif
Other DBs
NCBI-GeneID:
121486598
NCBI-ProteinID:
XP_041603508
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Position
3:128238863..128321827
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AA seq
1459 aa
AA seq
DB search
MALYFDHRIEAPDSVESPSHIHWHPVHPFLAVASISRIAGGNVDIYLEQGEHVSDTHIER
SFRVTSLCWHPTRPILAVGWETGEVTVFNKQDKEQHAVPPTHTTDITVLKWSPNGNCLVS
GDRLGVLLLWRLDQRGRVQGTPLLKHDHGKPLTHCIFRLPPPGKDLVQLAKAAVSGDERA
LDMFNWRKSGFGSFLKMGSQEGLSFFVSLMDGTVLYVDEKGKSTQVASTDSSIQTLFYIE
KREALVVVTQNLLLSLYAVRPEGKAEEVMKVKLSGKTGCRADIALIEGSVLVTAIGEPVL
RFWDLEGGENYVLSPAEKFGFEKAENINCVSYCKTKGLLAAGTDKGRVAVWKKLPGPQSS
RVAEGKDRWIFQTPSELEGNITQIKWGSRKSLLAVNNMSSVVILSEQAMSSHFHQQVAVV
QTSPSLLSVSFLSTGVTHSLRIDMHVSGVFTTKDAIAVWNGKQVMIFEPSGGTLRNAGTF
LCETPVLAMHEDNVYTVEPNRVQVRTWQGTVKQLLLFSEAEGSPCFLDICGNFLVVGTDL
AHFKSFDLSRREAKVHCSDKNLAALIPGAAGVASLRCNASGSRISILLSKVDNSPDSKIC
FYNVEMDIMTILDFKTGHINRREELSFNGQETKKSHAFVDERLMDLIPVNHFWDQNEPRL
FVCEAVREAPGAQLHFGDKKPPTEDSPVPTADVLILSFFITEEHGFLLQDSFPRPPAYQN
LLGIEAPHYYFMRKPGEADREDQVDSGCPCVGRRPLRDFIGLEGCDKPTRDAMLQFSFFV
AVGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGARALREAEQEP
ELEARVAMLAIQLGMLEDAEQLYRKCERYDLLNKLYQASDQWQKAVEVAELHDRIHLRTT
YYNYARHLEASADRGLALSYYEKSDTHRFEVPRMLSEDLQSLELYINKMKDKTLWRWWAQ
YLESQAEMDAALHYYELAQDYFSLVRIYCFQGNIQKAAEIANESGNWAASYHLARQYESQ
EEVRQAVHFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMTEAALYYEDKGEHMDR
AVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDERSDPALLARCSDFFIEHSQYKKAV
ELLLAAKKYHEALRLCLEQNMTITEEMAEKMTVSKDSKDLSEESRRQLLEQIANCCMRQG
NYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWRKEP
EIMKNIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAHKCLSKAKAQSPL
DQETKLAQLQSKMTLVKRFIQARRMYPEDPKEAVKQCELLLEEPELEGTIRVGDVYGFLV
QHYLQGEEFHVAYKYLEEMRKRVPSANMSYYVNQQTVDAVHQGLGIPLMCTVPERVHHNS
AEDHKEVDEEVLEEVENDP
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggccctctactttgaccaccgaatagaagccccagactctgttgagtctccttcccac
atccattggcaccctgttcatccattcctggcggttgcctccatcagcaggatcgcagga
ggcaacgtggatatatatctggaacaaggtgagcatgtgtccgatacacatattgagagg
tcattccgggtcacttccttgtgctggcacccgacacgaccgatccttgctgttggctgg
gagactggggaagtgacggtgtttaataagcaggacaaggagcagcacgcggtccccccg
acacataccaccgatatcaccgttctcaagtggagccccaacggcaactgccttgtgtca
ggggacaggcttggtgtcctgctcttgtggagattggaccaaagaggtcgagtacaaggg
acgcccctgctgaaacacgaccatggaaaacccctaactcactgcatcttccggctcccc
cctcctggcaaggaccttgttcagttggcgaaggcagctgtgagcggtgatgagagagcc
ctggacatgtttaactggaggaaaagtggctttggaagtttcctgaaaatgggatctcaa
gagggactatcattctttgtcagcttgatggatgggacagtgctctacgtggatgagaaa
gggaagagcacccaggtggcatccacagacagctccatccaaacactcttctacatcgag
aagagggaggccctggtggtggtcacgcagaacctgctgctgtctctgtacgcggtgagg
cccgagggcaaagcagaggaagtgatgaaggtgaagttgagcgggaagacaggttgccgg
gcagacattgcattgatagaaggcagcgtgcttgtgaccgccataggggaacctgttctc
agattctgggatctagaaggtggagagaattacgtgctgagtccagcagagaagtttggt
tttgaaaaagctgagaatataaactgtgtttcttactgtaaaaccaaaggtcttctggca
gcgggcaccgataaagggcgagtagccgtgtggaaaaaactgccaggcccccagagcagc
cgagtggcagagggcaaggacaggtggatttttcagacccctagtgagctcgaaggcaac
atcacacagattaagtggggctcccggaagagcctcctggcagtgaacaacatgagctcc
gtggtgatcctcagcgagcaggccatgtcttcacacttccaccagcaagtggccgtggtg
cagacttccccaagcttacttagcgtgtccttcctgtccacgggggtgacacacagcctg
cgtatagacatgcacgtcagtggagtgttcaccaccaaggatgccattgctgtctggaac
ggaaaacaggtgatgatctttgagccttctggaggcacattacggaatgcaggaactttc
ctgtgtgagactccagtgttagccatgcatgaggacaatgtgtacactgtggagccaaac
cgagttcaagttcgaacctggcaggggactgtgaaacagctcttactgttctccgaggcg
gaggggagcccatgcttccttgacatctgtggaaatttcctggttgtggggacagacctg
gctcactttaaaagttttgatctttcccgaagagaggcgaaagtgcactgcagtgacaag
aacctggccgcactgatcccgggcgcagcgggcgtggcctcactcaggtgtaacgccagc
ggcagcaggatcagcatcctcctcagcaaggtagataacagccctgactccaaaatctgc
ttctacaacgtggaaatggacatcatgaccatccttgacttcaagacggggcacatcaat
cgcagggaggagttgtcctttaatgggcaagagaccaagaagagccacgcctttgtggat
gagaggctgatggatctcattcctgtgaaccacttctgggaccagaacgagcccaggctg
tttgtgtgtgaggccgtgcgggaggcgccaggagcccagctgcatttcggggacaagaag
ccgcccactgaggacagcccagtccccacggcggacgtgctgattctgtccttcttcatt
acggaagagcatggcttcttgcttcaggacagcttcccacggcctcccgcctaccagaat
cttctggggatcgaagcgcctcattattacttcatgagaaagccaggagaagcagacaga
gaagaccaggtggactcagggtgcccgtgcgtgggcaggaggccactgcgagacttcatc
gggctggagggctgcgataagcccactcgggatgccatgcttcagttcagtttcttcgtc
gccgtcggagacatggacgaagctttcaaatctatcaaactcatcaaaagtgaggctgtc
tgggagaacatggcgcgcatgtgcgtgaagacccagcggctggatgttgccaaggtgtgc
ctgggaaacatgggccatgcgcgtggagcccgagcgctgcgggaggccgagcaagagccg
gagttggaggccagagtggccatgctggccattcagctgggcatgctggaggacgccgag
cagctgtacaggaagtgcgagcgctacgatctcctgaacaagctgtaccaggcctctgac
cagtggcagaaggccgtggaagtcgcagagctccatgatcgcattcatctgcgcaccacc
tactacaactacgcccggcacctggaggcgagcgccgaccgcggcctggccctcagctac
tatgagaagtccgacacccaccgcttcgaagtccccaggatgctctcggaggacctgcag
tctctggagctctatatcaataagatgaaggacaagaccctgtggaggtggtgggcccag
tacctggagagccaggctgagatggatgctgcgctgcactactacgagctggcacaggac
tacttctccctggtccgcatctactgcttccagggcaacattcagaaggctgctgagata
gccaacgagagcggaaactgggccgcgtcctatcacctggcccgtcagtacgagagccag
gaggaggtgaggcaggccgtgcacttctacacgcgggcgcaagccttcaacaatgccatc
cgcctgtgcaaggagaatggcctggatgaccagctcatgaacctggctctgctgagctcc
cccgaggatatgaccgaggcggcgctctactacgaagacaagggggagcacatggacagg
gcagtcatgctgtaccacaaggccggccacttctccaaggccctggagctggccttcgcc
acccagcagttcgtggctctgcagctcatagcagaggacctggatgagaggtcggacccc
gccctcctggcccgctgttcggatttcttcatcgagcacagccagtacaagaaggcggtg
gagctgctgctggctgcaaagaagtatcacgaagccctgcggctttgcctggagcagaac
atgaccatcaccgaggagatggccgaaaagatgaccgtgtccaaggactccaaggacctg
tctgaagagtcccgacgccagctgctggagcagatcgcgaactgctgcatgcgccagggc
aactaccacctggcaaccaagaagtacacgcaggcggggaacaagctgaaggccatgaga
gcactgctgaagtctggggacacggagaaaatcgtgttctttgcaggcgtctcgaggcaa
aaggaaatctacatcatggctgccaactacctgcagtccctggactggcggaaggagccg
gagatcatgaagaacatcatcagcttctacaccaaggggcgtgccctagaccttctggcc
ggcttctacgatgcctgtgcccaggtggagattgatgagtaccagaactacgacaaagcc
cacggggcgctgaccgaggcccacaagtgcctctccaaggccaaggctcagagccccctg
gatcaggagaccaagctggcccagctgcagagcaagatgacgctggtgaagaggttcatc
caggcccgaaggatgtaccccgaggaccccaaggaggcggtgaagcagtgtgagctgctc
ctggaggagccggagctggaaggcaccatccgcgtgggggatgtctatggcttcctggtg
cagcactacctgcagggggaggagttccacgtggcctacaagtatctggaggagatgcgg
aagcgagtgccctctgccaacatgtcctactacgtgaaccagcagactgtggacgccgtg
caccagggcctgggcatccctctcatgtgcactgtaccggagcgggtccaccacaacagt
gcagaggaccataaggaagtggacgaagaggtgctagaggaggtggagaacgacccctga
DBGET
integrated database retrieval system
