Vulpes lagopus (Arctic fox): 121487094
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Entry
121487094 CDS
T07435
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121487094 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121487094 (SLX4)
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121487094 (SLX4)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121487094 (SLX4)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121487094 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
121487094
NCBI-ProteinID:
XP_041604471
LinkDB
All DBs
Position
3:126708079..126727730
Genome browser
AA seq
1783 aa
AA seq
DB search
MRGRFSNEVTRKDEDGAAMGSRLQTSHLRRPPTSLKACQRMDESDDDFKELCASFLQRVK
KNVSKEVLDERKGQKASNSTQISKPKRTKPTGTRGKTLPGLREKKTRSGSQAPRTKEQGA
PKQQESEPAPPKNGEGSVLASTPLQKGAQTTQTEAAPDSNSQPPPSCLTVTAPSPSKART
AELVVRRMQQFKRADPERLQHASERCSLEATLEENTPQGPPEEMTAGNGPGYGLPVLEST
LQQGLGPHGAAAATPEGSLEEAGLFFCQICHKNLSAMNVTRREQHVNRCLDEAEKALTPS
IPRIPECPICGKPFLTPKSRISHLKQCAVKMDVGPQLLLQAVRLQTAQPDGAYSTQASSF
NNHGGLKRKGATNRKELQKKQKVSEPEVPSEDLLVAMALSRSKMEQEAVPPVLRLESAFS
ERIRLGAEKKSRKRKAPACPPLLLLQDLETTGRQTEDRVAQLFAEEMELSSTPPLPASRI
LQGELEKAGQSLQPPGGKKNFLWEGSALTGAWALEAFYTTSLVPPLVPQRSAPAEGLAQD
STLPPVLLDQPELGVRTPPRHSAQPVGCGPRNPSPSASQREHQALQDLVDLAGEGLNATP
WPCSGGLASSGVAAGMDVSSTGLPPTGFVLPPEKHLEGGSQASLTLGLLLADFRAMVNNP
HLSDIQLQTDSGEVLYAHKFVLYARCPLLMQYVNSEGFFAVEDGDLRSQRVLLSDVSTEA
IHALLHYLYTADPGVPPQLAPDLSALAHRFGVSELVLLCEQASDMTDSEDTLWKEKEDKD
CESRAENFQELLRSMWTGEEEEAEALMKPEGCEEDREKVNEAEMEEIYEFAATQRELLRG
EGAPEIKEKTDPFGEDGPVSMQILGSDQVSRQPENAEQMESSGQGREEAPAKRKSARQSM
PLLLKGQGAGEKAGSPEGALGCSGSPRPSGGCGPGRKEGAFWHSADAPEARLFSSTPRRC
SGPSQIMSHLKEDNDTISGKGTESACIPAHQQVPPWHPPLSQPPRGQSLRGESPFSVPQS
QGRASRVASQDSPLKQRKGRSLLTLFKDPGVQKGEEHSSLLECRNKGILISPEKSPSIDL
TQSKPSCLSSRSQNTPSSKNKEDEIILLLDSDEELELEQTKIKSVFNGPLEERKVLEVSP
KPSELFSVIDVDADQEPFQSPARGETSLQCGDGRLSGNRGSVGSRGTPQLPCDPDSGPEG
DSTMDMSWFVPATPLASRRRDSSSQTQITGLRSRAPVDQTAEVKCWTPLENRGVPEAASQ
CSVITPPVSSSGLVSVSAGSPDSRSPARPHPAHPQRCSPALCPISHLADFTGQPHGCSPP
GPSPPSQAITSEVVEVEDSEDEQEAASCQAHSSPLPDSDPPIPVDECHWHVEPLSPIPID
RLNLERTGPLSTSSPGSKAGEAPDSSGCSSPALLGTPPARGSCTSQRKSRERSPRASVPA
SSRLSFLNSALWDDWDGEEQKSSELLPPAQTLSDAAAAQKSEGLETPKGAHRKNLPPKVP
ITPMPRYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLESDSENESQSSQV
LPEAPCSQTHASRTSRAAGRAQLGATSGPLPQRSKGSTKTKGPRHQKQQPGGSIPPMNLS
QAKEESPDPDGDTQLPASQESVASSMDSSDSSFSSQSSSCEFGAAFESAEDEEGEEEESA
SQTAVHAAATEEAVRHYIRSRPALYRKVLLYQPFELSELQAELKQQGISVATGKLLDFLD
AHCITFTTAAARKEKLERKRRQLAAKKKGAEPTGRSAPPHPWP
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgaggggacgcttctctaacgaggtgactcggaaagatgaggatggggcagccatggga
agtagattacagacctcacacctcagaagaccacccacaagccttaaagcttgtcagagg
atggatgagtcagatgatgattttaaggaactctgtgccagctttctccaaagggtgaaa
aagaatgtcagcaaggaagtgttggatgaaaggaagggacaaaaggcctcaaacagcact
cagataagcaaaccgaaaaggaccaaaccaactgggaccaggggcaaaacccttccaggc
ctgagggagaagaaaactcggtctggcagccaggccccaaggactaaagagcaaggggcc
cccaagcagcaggagagtgaaccagctccccccaagaacggagagggaagtgtgcttgcc
tccactccactccagaagggtgcacagaccacccagacagaggctgctccggacagcaac
tcccagccccctccttcctgtctgacagtgacagcgccaagtccctccaaagcccggacg
gcagagttggttgtacggcgaatgcagcagttcaagagggcagaccccgagcgtttgcag
catgcttcagaaaggtgctccctggaggccacgcttgaagaaaacaccccacagggccct
ccagaggagatgacagcagggaatgggccgggctacgggctccccgtgctagagagcacc
ctgcagcagggccttgggccccacggagcggccgcagccacaccagagggcagcctggag
gaggcggggctgttcttctgccagatctgccacaagaacctctcggccatgaacgtgacg
cgaagggagcagcacgtgaaccggtgcttggatgaggctgaaaaggcactgacaccctcc
atacctcggatccccgaatgcccaatttgtggcaaaccctttctcaccccaaagagcaga
atcagccacttgaaacagtgtgcagtgaagatggacgtcggcccccagctcctgctccag
gccgtgcggctgcagacagctcagcctgacggggcctatagcacacaggcatcaagcttc
aacaatcacggaggtttaaagcggaagggagccaccaataggaaggagctgcagaagaag
caaaaggtcagcgagcccgaggtgccatctgaagacttgcttgtggccatggctctgtcc
cggtccaagatggagcaggaggccgtgccccctgtgctgagactggaaagcgctttctcc
gagaggataagactgggggcagaaaagaagagtcgcaagaggaaagcacctgcctgccct
cccctgttgttactccaagacctggagaccacagggaggcagaccgaggaccgggtggcc
cagctctttgcggaggagatggagctgtccagcacaccgccacttcctgcaagcaggatc
ctacagggggagctggaaaaggctggccagagtctgcagccccccggagggaagaagaac
tttctgtgggagggcagtgccctgactggagcctgggctctggaagccttctacaccaca
agcctggtccctcccctggtgccccagcggtctgcccctgccgagggtcttgcccaggac
tccacgctgccaccggtgctgcttgaccagccagagctgggtgtgcgaacaccacctcgc
cacagtgcccagcctgtgggctgtggcccccggaacccatcaccctccgccagccagaga
gagcaccaggccctgcaggaccttgtggacctggcaggagaggggctgaatgccaccccg
tggccctgcagtgggggcttggccagctcaggagtggccgcagggatggatgtgtcgtcc
actggccttccaccgactgggtttgtcctgccacctgagaagcacctggaggggggcagc
caggcttcgctcaccctcggtttgctgctggcggacttcagggccatggtcaataaccca
cacctgagcgatatccagcttcagacggacagcggggaggtgctctacgcacacaagttc
gtgctttatgcccggtgcccccttctcatgcagtatgtgaacagtgaaggcttctttgct
gtggaggatggcgatctgaggagtcagcgtgtgttgctgagtgacgtgagcaccgaggcc
atccatgcgctcctgcactacctctataccgcggaccctggcgtgcctccccagctggcc
cctgacctgagcgctctggcccacaggtttggtgttagtgagcttgttcttctgtgcgaa
caagcatctgacatgacggattcagaggacacactgtggaaggagaaggaagacaaggat
tgtgaaagccgcgcggagaacttccaagaactcttgaggtccatgtggacaggtgaagag
gaagaagcagaggctttgatgaaacctgagggttgtgaagaagacagagaaaaagtgaat
gaggcagaaatggaagaaatttatgaatttgcagccactcagcgagagctgctccggggg
gaaggggctccagagatcaaggaaaaaacggacccattcggggaggatggtccagtgtcc
atgcagatcttaggaagtgaccaggttagcagacagccagaaaatgcagaacagatggaa
tcgtctggtcagggaagagaagaggccccagccaaaaggaagagcgcaagacagtccatg
cccctgctgctcaagggccagggcgcgggagagaaagcaggctccccggagggagcgctg
ggttgttccggctcccctcgcccttctggaggctgcgggccagggagaaaggaaggtgct
ttctggcactcagctgatgctcctgaggcccggctgttttcatcaactcccagaagatgc
tctggaccatcccagataatgagccatctcaaggaagacaatgacaccatctcaggaaag
gggacggagagcgcctgtatccccgctcaccagcaggtgcccccatggcacccgcccctg
tcacagccccctcggggccagagtctcaggggtgagtcacccttttcagtgccccagtca
caaggcagagcttccagggtggcctcccaggactcaccattgaagcagaggaagggcagg
agcctcctcacgttatttaaagatccaggtgtccagaagggtgaagaacatagttccctg
ttggaatgcagaaataaagggattctgatctccccagaaaaatctccttccattgaccta
acccagtcaaaacctagctgtttgagctccagatctcaaaatactccatccagcaagaac
aaagaagatgagattatccttttattggattcagatgaagagctggagctagaacaaacc
aaaataaagtcagtttttaatggtcccttggaagaaaggaaagttctagaagttagcccc
aagccttctgagctgttttctgtgattgacgttgatgcagatcaggaacctttccaaagt
ccagctagaggagagacttcactgcagtgcggggatgggaggctgtcagggaaccggggc
tctgtggggagcagagggacccctcagctgccgtgtgaccctgacagcggccctgagggg
gacagcaccatggatatgtcatggttcgtgcctgccaccccactggccagcagaaggcgt
gactcttcttcacagacccagataacaggcctcaggtcccgggctccagtggatcagaca
gctgaggtcaagtgctggaccccattagaaaataggggtgtgcccgaagctgcaagccag
tgttctgtcatcacaccccccgtgtcgtcctcaggcctggtctccgtcagtgcaggcagc
cccgacagcaggagccctgccaggccccaccctgcgcacccccagcgctgctctccggct
ctctgtcccatctcccatctggccgatttcactgggcagccccatgggtgctcgccgcca
gggcccagcccaccgagtcaggccatcacaagtgaagtcgtggaggtggaggacagcgaa
gacgagcaggaggcggcctcctgtcaggcccacagcagccccctgccggacagcgaccct
ccaattccggtggatgagtgtcattggcatgtggagcccctgtcacccattcccattgac
cgcttgaaccttgagcggacaggccccctgagcaccagcagtccgggcagtaaggcaggg
gaggctccagacagcagtggctgcagctccccggccctcctgggcacccctcctgcccga
gggagctgcactagccagagaaagtcccgagagaggtcccctcgggccagcgtgccggcg
agcagcaggctaagctttttgaactcagctctgtgggacgattgggatggagaggaacag
aagtcttcagagctccttcctcccgcccagacactgagtgatgctgctgctgctcagaaa
tcagaagggttggagacgccaaaaggtgctcatcggaagaacttgcccccgaaagtgccc
atcaccccaatgccaaggtactccatcatggagaccccggtactgaagaaagaactggat
aggtttggggtccgccctctacccaaacgccagatggtcctaaaactgaaggaaatattc
cagtatactcaccagactctggagtcagactctgagaatgagagccagtcctcacaggtg
ctcccagaggctccgtgcagccagacccacgccagcaggacctccagggctgctggccgt
gcccagctgggggccacttctgggcctcttccccaaaggtccaaggggtccactaagacc
aagggcccccgacatcaaaagcagcagcctggtggaagcatccctccaatgaacctgtca
caggcaaaggaggagtctccagatcctgatggtgacacccagctccctgcgtcccaggaa
tcagtggcctcctccatggacagcagtgacagttcctttagctcacaaagttcttcctgt
gagtttggagcggcctttgagtctgcagaggatgaggaaggtgaagaggaggagagtgca
tcccagacagccgtgcacgcagcagccacggaggaggccgtgaggcactacatccgctcc
aggccggccctctaccgcaaggtcctgctgtaccagcccttcgagctgtcagagctgcag
gccgagctgaagcagcagggcatcagtgtggccactgggaagctgctggacttcctggat
gcccactgcatcaccttcaccactgctgcggcccggaaggaaaagctcgagaggaagagg
cggcagcttgcagccaagaagaagggggcagagccaacaggccggtccgcccctccccac
ccctggccgtga
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integrated database retrieval system
