Vulpes lagopus (Arctic fox): 121487372
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Entry
121487372 CDS
T07435
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04612
Antigen processing and presentation
vlg05145
Toxoplasmosis
vlg05152
Tuberculosis
vlg05164
Influenza A
vlg05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
121487372 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121487372 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
121487372 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
121487372 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
121487372 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vlg01001
]
121487372 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
vlg04054
]
121487372 (CIITA)
Enzymes [BR:
vlg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121487372 (CIITA)
Protein kinases [BR:
vlg01001
]
Serine/threonine kinases: Other
TAF1 family
121487372 (CIITA)
Pattern recognition receptors [BR:
vlg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121487372 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
121487372
NCBI-ProteinID:
XP_041604956
LinkDB
All DBs
Position
3:complement(120830259..120877451)
Genome browser
AA seq
1206 aa
AA seq
DB search
MNHFQTILARVRMLLSSHQPSQVQALLDNMLEKELLSQEYHCALLREPDGEALARKISLT
LLEKGDPDLALLRWAWSGWQTPVAEGDPDSFKDHADSGQFAAMELGPLEGGYLELLNSST
DPLQLFHLYDQTDLAREEIELFSEPDMDTINCEQFSRLLCDMEGDEETRETYANIAELDQ
YVFQDSQLEGLGKDIFIEHIGLEDMISETVEVLEEAGQKSQKRPFPEELPVDLKHRKLAE
PLTVPMVTGTFLVGSVSDPLALPCLSPPAVFSEQPAPVQSWLGETVLMPVPASGSLLSCL
SLPAGGIQIVPSLPSLPQGLWPISGAGTGVSGMVIYQGEMPQASQVLPSSGPAVQSLPKS
PDRPGSTSPFAPSAADLPGMPEPALTSRANMTEDQLSPPRCVAAHEVSSKPPKLPESVEQ
FCSSLRDKYQAEPAGPDGILVEVELVRARLEKSSSKSQDRELATPDWAERQLARGGLAEV
LLAAGDRRRLRETQVIAVLGKAGQGKSRWAREVSRAWACGQLPQYDFVFYIPCHCLDHVG
DTYRLQDLLFSLGPRPQPVDDEVFGHILKRPDRVLLILDAFEGLEGQDGTCGPASTEPQS
LRGLLAGLFQRKLLRGCTLLLIARPRGRLAQSLSKADVMFEVAGFSAQQAETYMTRYLDH
SGATEHREQALALLRGQPFLLSHSHSPTVCQAVCQLSEALLELGDGAELPSTLTGLYVGL
LGPAAQDSPPGALAGLARLAWELGRRHRGTLQESQFPSAEVRAWAVAKGLVRPVPGAPDT
ELAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLFQ
PHADCLGALAGPAGVTLGDRKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDPALWQH
VVQGLPGRLSFLGTRLTPPNAYVLGSALAAAGRDFSLDLRSTGIDPSGLGSLVGLSCVTH
FRAALSDAVGLWESLQQRGETKLLRVVEEKFTIEPFKAKSPKDVEDLGNLVQIQRTRSSL
EDTAGELPAVRDLKKLEFALGSVFGPQAFPKLVKILEAFSSLQHLDLDSLSENKIGDEGV
EQLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAPSLLRLSLYNNYICDVGAESL
AQVLPDMVSLRVLDVQYNKFTGAGAQQLAASLRKCPHMETLAMWTPTIPFGVHEHLQQLD
SRISLR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactttcagaccatcctggctcgggtccggatgctgctgtccagccatcagccg
agtcaagtgcaagccctcttggacaacatgctagagaaggagcttctctcccaggagtac
cactgcgccctgctccgcgagcctgatggcgaggccctggccagaaagatctccttgacc
ctgctggagaaaggagacccagacttggccctcttgaggtgggcgtggagtgggtggcag
accccggtggcggagggggaccctgactccttcaaggaccatgctgacagtggacagttt
gccgccatggagttggggcctctggaaggcgggtacctggagcttctcaacagcagtacc
gatcccttgcagctcttccacctctatgaccagacggacctggctagagaagagattgag
ctcttctcagaacccgacatggacaccatcaactgcgaacagttcagcagactgttgtgt
gacatggaaggtgacgaagagaccagggagacttatgccaatatcgcggaactggaccag
tacgtgttccaggactcccaactggagggtctgggcaaagacattttcatcgagcatata
ggattagaagacatgatcagcgagactgtggaggtgctagaggaagcaggacagaaaagt
cagaaaagacccttcccagaggaactgcccgtggacttgaagcacaggaagctagctgag
cccctcactgtacccatggtgaccggcaccttcctggtggggtcagtgagtgaccccttg
gctcttccctgcctgtcaccacctgccgtgttcagcgagcagcccgcacctgtccagagc
tggctcggggagactgtcctgatgccagtacctgcctccggttccttgctgagctgcctg
agtcttcctgctggtggcatccagatcgtccccagcctcccctccctgccccaggggctc
tggcccatctcgggggctgggacaggggtgtctggcatggtcatctatcaaggggagatg
ccccaggccagccaggtgcttccttccagtggcccagccgtgcagagtctccccaagtcc
ccagatcggcccggctccaccagcccctttgccccatctgccgctgaccttcctggcatg
ccagaaccagccctgacctcccgtgcaaatatgacagaggaccagctgtcccctccccga
tgtgtggcagctcatgaggtctccagcaagcctccaaaattgcccgagagcgtggagcag
ttctgcagctccctgcgagacaagtaccaggctgagcccgcaggcccagatggcatcctg
gtggaggtggagctggtgagggcacggctggagaagagcagcagcaagagccaggacagg
gagctggccaccccggactgggcagagcggcagctggcccgagggggtctggccgaggtg
ctgctggccgcgggtgaccgccggcggctgcgggagacgcaggtgatcgctgtgctgggt
aaagcaggacaggggaagagtcgctgggcccgagaagtgagccgggcctgggcctgcggc
cagctgccacagtacgacttcgtcttctacatcccctgccactgtctggaccatgtgggg
gacacgtaccgcctgcaggatctgctcttctccctggggccccggccgcagcccgtggat
gacgaggtctttggccacatcttgaagaggcccgaccgcgttcttctcatcctggatgcc
ttcgaggggctcgaaggccaagacggcacgtgcggccccgcgtccacagagcctcagtcc
ctccgggggctgctggccggcctcttccagcgtaagctgctgcgaggctgcaccctgctg
ctcatcgcccggccccggggccgcctggcccagagcctgagcaaggccgacgtcatgttc
gaggtggccggcttctcggcccagcaggccgagacctacatgacgcgctacttggaccac
tctggggccacggagcaccgagagcaagccctggccctccttcgcggccagccgttcctc
ctcagccacagccacagccccaccgtgtgccaggctgtgtgtcagctctccgaggccctc
ctggagctgggtgacggggccgagctgccctccacgctcacgggactctacgtgggcctg
ctaggccctgcggcccaggacagccccccaggggccctggcgggactggccaggctggcg
tgggagctgggccgcagacaccggggcacgctgcaggagagccagttcccatcggcagag
gtgagggcctgggccgtggccaagggcttggtgcggcccgtcccgggggccccagacacg
gagctggccttctccagcttcctcctgcagtgcttcctgggggctgtgtggctggccctg
agcagtgagatcaaggacaaggagctgccacagtacttggcattgacgccgaggaaaaag
aggccctatgacaactggctggagggtgtcccgcgcttcctggccgggctgcttttccag
cctcatgccgactgcctcggagccctggcagggccggccggagtcaccttgggggacagg
aagcagaaagtgctcagcaggtacctgaagcggctgcagccagggacgctccgggccggg
cggctgctggagctgctgcactgtgcccacgaggcctcggaccctgcgctctggcagcac
gtagtgcaggggctcccgggtcgcctgtccttcctgggcacccggctcacgcctcccaac
gcctatgtgctgggcagtgccttggcagcggcgggccgagacttctccctggacctccgc
agcactggcatcgacccctctggactggggagcctcgtgggactcagctgtgtcacccat
ttcagggctgcgctgagtgacgcggtggggctgtgggagtctctccagcagcgaggggag
accaagctgctccgggtggtggaggagaagttcaccatcgagcctttcaaggccaagtcc
ccgaaggacgtggaagacctgggcaacctcgtgcagatccagaggacgaggagttccttg
gaagacacagctggagaactccctgctgtccgggacctcaagaagctggagtttgcgctg
ggctcggtcttcggcccccaggctttccccaaactggtgaagatcctcgaggctttttcc
tctcttcagcatctggacctggactcgctgagtgagaacaagatcggggacgagggtgtg
gagcagctgtcagccaccttcccacggctgaaggccctggagactctcaacctatcccag
aacagcatcaccgacgtgggcgcctgcaagctcgccgaggccctgccctccctggctcca
tccctcctcaggctgagcctgtacaataactacatctgtgacgtgggagctgagagcctg
gcacaggtgcttccagacatggtgtccctccgggtgttggatgtccagtataacaagttc
acgggcgccggggcccagcagctcgccgccagcctgagaaagtgccctcacatggagaca
ctggcgatgtggacgcccaccatcccgttcggcgtccatgaacacctgcagcagctggac
tcacggatcagcctgagatga
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