Vulpes lagopus (Arctic fox): 121487562
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Entry
121487562 CDS
T07435
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121487562 (TNRC6A)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121487562 (TNRC6A)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121487562 (TNRC6A)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121487562 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121487562
NCBI-ProteinID:
XP_041605353
LinkDB
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Position
3:complement(110175456..110281957)
Genome browser
AA seq
1957 aa
AA seq
DB search
MRELEAKATKDVERTLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNPQQQQQPQPPQQPQQPPQQPPQPPQQQP
QPAQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQQP
QNNGEVQNSKNQSDINHSTSGSHYENSQRGPVSSPSDSSTNCKNAVVNDSPETEAWPSVP
GSDPELASECMDADSASSSESERNITIMASGSTGGEKDGLRNSTGLGSQNKFVVGSSSNN
VGHGSSPGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNS
ASNHGAWPVLDNNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVGGSSTHGTWGSL
QETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSNTGAWR
VSTMNHPQIQAPSVMNGTSLSHLSNGEPKSGGSYGTTWGAYGSNYSGDKCSSPNGQANGD
TVNATLMQPGINGPMGTNFQVNTNKGGVWESGAANSQSASWGSGNGANSGGSRRGWGTPA
QNTGTNIPSVEWSKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQASAASQTTEQNSVWAK
TGSTVESEGSTESTGRLEEKATGENQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQ
TPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACTDKTSPTSNDTSSVSGWGD
PKPALRWGDSKGSSCQGGWEDDAAATGMVKSNQWGNSKEEKSAWNDSQKSKQGWGDGQKS
NQGWSVSASDNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFSWGNNINPN
NSSGWDESSKPNPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATGKP
PGTGWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN
VPNGSSRSDQQAQVHQLLPSAGAISNKEAGSGSGWGEPWGEPSTPATTVDNGTSAWGKPI
DSGPSWGEPIAAASNTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEE
DVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGTMKGGNKQEEAWINPFV
KQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQI
SKESSMERSPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNS
VRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPN
NGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGR
PLSVQQQMMQQSRQLDPSLLVKQQTPPSQQQPLHQPAMKSFLENVMPHTTPELQKGPSPI
NAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFR
LEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNID
PETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPL
SSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLS
TWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHG
PLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQS
LTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPHYS
TSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaaggactcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatccgcagcagcagcagcagccacag
ccgccacagcagccacagcagccgccgcagcagccaccgcagccgccacagcagcagccg
cagccagcacaggccttgcctcggtatcctcgggaagtaccaccacgatttcgccaccag
gaacacaaacagcttctaaagaggggtcagcattttcctgtcatagcagcaaacctggga
tctgctgttaaagtgttaagcagccagtcagaaagcagtgctttaacaaatcaacagcca
caaaataacggagaggtgcagaacagcaaaaaccagtcagatataaaccacagtacttca
ggatcccattatgaaaattcacagcggggacctgtgtcttctccgagtgactctagcaca
aattgtaagaatgctgttgtaaacgactcccctgagacagaagcatggccctcagtccct
ggcagtgatccagagttggcttcagaatgtatggatgctgattctgcctccagttctgaa
tcagagagaaacatcactatcatggcttcagggagcacaggtggtgaaaaagatggcctt
cggaatagcactggacttggttcccaaaacaagtttgtggttggtagcagcagcaataat
gtgggccatggaagtagtcctgggccatggggtttttcccatggagccataataagcaca
tgtcaggtctctgtggatgctcctgaaagcaaatcagaaagtagcaacaatagaatgaat
gcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcactttgaattca
gctagcaaccatggtgcctggccagtattagacaacaacggacttgccctcaaagggcct
gtagggagcggtagttctggcatcaatattcagtgtagtaccataggccagatgcctaac
aatcagagtattaactctaaagtgggtggttcttccacccatggtacctggggaagcctt
caggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagtggtcaacct
cagaatattaccactgagatgactggaccaaataacactactaactttatgacctctagt
ttaccaaactccggttcagtacagaataacgaactgcctagtaatacaggggcctggcgt
gtgagcacaatgaatcatcctcagatacaggctccatcggttatgaatggcacttccctt
tctcatcttagcaatggagagccaaaaagtggaggctcttacggtactacgtggggtgcc
tatggttctaattactctggagacaaatgttcgagccctaacggccaagctaatggtgac
actgtgaatgcaactctaatgcagcctggcataaatgggcctatgggcactaactttcaa
gtgaacacaaataaaggaggtgtgtgggagtctggggcagcgaattcccagagtgcatcg
tggggaagtggaaatggcgcaaattctggaggaagtcgacgaggatggggaactcctgca
caaaacactggcactaatatacccagcgtggaatggagcaaactgcctagcaatcagcat
tccaatgacagtgcaaatggcaatggtaagaagtttacaaatggttggaaatctactgag
gaagaggatcaggcttctgctgcatctcagacaactgagcagaacagcgtgtgggccaaa
acaggaagtacagtggagagtgaaggtagtacagaaagcactggacgcctcgaggagaaa
gcaactggggaaaatcagagtagagatcggagaaaaattgatcagcacacattactccaa
agcatcgtaaacagaactgacttggatccacgtgtcctctccaactctggttggggacag
actcctattaagcagaatactgcctgggatacggaaacgtcacctagaggggaaagaaag
actgacaatgggacagaggcctggggaagctctgcaacacagacttttaactcaggggca
tgtacagataagactagccctactagtaatgatacctcatctgtatcggggtggggagat
cccaaacctgctctgaggtggggagattccaaaggctcaagctgccaggggggatgggaa
gatgacgctgctgctacaggaatggtcaagagcaatcagtgggggaacagcaaagaagag
aagtccgcatggaatgattcgcaaaagagcaaacagggatggggtgatggacagaaatca
aaccaagggtggtccgtttctgccagtgataactggggagaaacgtcaaggagtaaccat
tggggtgaggctaataagaaatctagctcaggaggtagtgacagtgacaggtctgtttct
ggttggaatgaacttggtaaaactagttctttttcttggggaaataacataaatccaaat
aattcgtcaggatgggatgaatcttctaaacctaatccttcccagggatggggagatcct
ccaaagtctaatcaatctctaggttggggagattcgtcaaagccagtcagttctccagac
tggaacaagcaacaagacattgtcgggtcttggggaatcccaccagcaacaggcaaacct
cctggtacaggctggctgggaggacctataccagccccaacaaaagaagaagagcccaca
ggctgggaggaaccatccccagaatccatacgtcgcaaaatggagatcgatgacggaact
tcagcttggggagatccgagcaaatacaactacaaaaatgtgaacatgtggaacaaaaat
gtcccaaatggcagcagccgttcagaccagcaagcacaggtacaccagttgctaccatct
gcaggtgccatctcaaacaaagaggcaggcagtggctctggctggggtgagccctggggg
gagccttctactccagccacaactgtggataatggtacttcagcatggggtaaacccata
gacagtggtcccagctggggggagcccattgctgcagcatccaacacatccacgtggggc
tccagctctgttggtcctcaagcattaagcaaatctgggccaaaatctatgcaagatggc
tggtgtggtgatgatatgccattgcctggaaatcgccccactggctgggaggaggaagag
gatgtagagattggaatgtggaatagtaattcatctcaagagcttaactcatctttaaat
tggcctccatatacaaagaaaatgtcatcgaagggtctgagtggcaaaaaaaggagaagg
gaaaggggaaccatgaaaggtggaaacaaacaagaagaagcatggataaatccattcgtt
aaacagttttcaaatatcagtttttcgagagactcacccgaagaaaatgtacagagcaat
aagatggatctttccggaggaatgttacaggacaaacgaatggagatagataaacatagc
ctaaatattggtgattacaatcgaacggtcgggaaaggccctggttctcggcctcagatt
tccaaagagtcttccatggagcgcagcccttactttgataaggatggcattgtagcagat
gaatcccaaaacatgcagtttatgtccagtcaaagcatgaagcttcccccttcaaatagt
gcactacctaaccaggcccttggctccatagcagggctgggtatgcaaaacttgaattct
gttagacagaatggcaatcccagtatgtttggtgttggaaacacagcagcacaaccccgg
ggcatgcagcagcctccagcacaacctcttagttcatctcagcctaatcttcgtgctcaa
gtgcctcctccattactctcccctcaggttccagtttcattgctgaagtatgcaccaaac
aacggtggcctgaatccgctctttggccctcaacaggtagccatgctgaaccagctatcc
caactaaaccagctttctcagatctcccagttacagagattgttagcgcagcagcaaagg
gcgcagagtcagagaagcgtgccttctgggaaccggcagcagcaagaccagcagggtcga
cctcttagcgtgcagcagcagatgatgcagcagtcccggcaactcgatcccagcctgttg
gtgaagcagcagaccccgccatctcagcagcagccactccatcagccagccatgaaatcc
ttcctcgagaatgtcatgccccacactacacctgagctgcagaaagggccatcaccaata
aatgctttcagcaacttcccgataggcttgaactcaaacttgaatgtaaatatggatatg
aacagtattaaagagccacagtcaagactaaggaagtggactacagtggacagcatttct
gtgaacacatctttggatcaaaactccagcaaacatggtgctatttcaagtggtttcagg
ctggaagagtctccatttgttccctatgactttatgaacagcagtacttctccagccagc
cctccgggttcaataggagatggctggccacgtgccaaatcgcctaacggctctagcagt
gttaactggccaccagaatttcgccctggtgaaccatggaaaggttatccaaacattgac
cctgaaactgacccttacgtcactcctggcagtgtcataaacaatctttcaattaatact
gtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctcatccttgaacacc
acgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaacgttcccctc
agcagtacagcacaaagcacttcagccagaaatagtgattccaaattgacatggtctcct
ggttcagttacaaacacctctctggctcatgagctgtggaaggtccctttaccacctaaa
aacatcactgctccgtcccgcccacctccgggactcactggtcagaagccacccttgtct
acgtgggataactctccccttcgtgtaggtggaggatggggaaattctgacgccaggtac
accccaggttccagttggggtgagagcagctcagggagaataacaaattggcttgttcta
aagaacctcacacctcagattgacggctcaactctgcgtactctgtgcatgcagcatggc
ccactgataacattccacctgaacctcccacatggaaatgctttggtccgttacagttca
aaagaagaggtagtgaaggcacaaaagtctctgcacatgtgtgtattggggaacactact
attcttgctgagtttgccagtgaagaggagatcagccgtttctttgcacaaagtcagtct
ctgaccccttctcccggctggcagtctctcgggtccagccagagccggctgggctccctc
gactgttcccactcgttctccagccggaccgatctcaatcactggaatggtgctgggctg
tcgggaactaactgtggagaccttcacggcacttcactctgggggaccccacattattcc
acaagcctgtggggtcctcccagcagcagcgacccccggggaattagcagcccatccccc
attaatgcttttctttctgttgaccacctgggtgggggtggagagtccatgtaa
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integrated database retrieval system
