Vulpes lagopus (Arctic fox): 121487780
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Entry
121487780 CDS
T07435
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121487780 (HFM1)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121487780 (HFM1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Meiosis-specific proteins
Others
121487780 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
Hfq
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
121487780
NCBI-ProteinID:
XP_041605718
LinkDB
All DBs
Position
3:146413941..146512774
Genome browser
AA seq
1437 aa
AA seq
DB search
MLKSNDSLFSLDTLFFEKPDEAKNYPDNEKSLDWFLPPVPLISEIPDTQVLEEEIESHKL
LGQEERPKMLPSNLKMTNVNTNYISPTQKFQFAFSSNKCETGDLNLTEAGNHNLTRVPGK
LTYGSQKYKNHIGTEIAPEKNVSGNTKLVNFAEDKGESTSAFRKRLFKISDNIREAVYSN
DSTNLESSVGSVKIVPTEMNKGESWKCSNSKQKHQYSDINMFAASNAVSASEIREDIFKG
PTFSVASQPHEVQGATENDLDSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRN
FVICAPTGSGKTVAFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFNDWKEKFGPIG
LNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVKD
ENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAVSATIPNAEDIAEWLSDGERPAVC
LKMDEKHRPVKLQKVVLGFPCGSNQTEFKFDLTLNYKIAGVIQTYSDQKPTLVFCATRKG
VQQAASVLVKDAKFIMAVEQKQRLQKYAYSIRDSKLRDILIHGVAYHHAGMELSDRKVVE
GAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRPQ
FDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWI
RSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLHDLSSLDLIRMDEDVNFKPTE
AGRLMAWYYITFETVKKFSTISGKETLLDLVTMISSCKEFVDVQLRINEKKILNTLNKDP
NRVTIRFPMEGRIKTREMKINCLIQAQLGCIPIQDFALTQDISKIFRNGSRITRWLSDFV
AVQEKFAILLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAMVNAGLTSFKKIEETD
ARELELILNRHPPFGTQIKETVMYLPKYELEVEQIARYSDTMAEILVTIILRNFEQLQAR
RTSPDSHYVTLIIGDADNQLVFKHKIMDSVLLKAGNWTKKIDVRRAFTSEDLSINLISSE
YVGLDIQQKFTVFYLGPRRLGNQIIMRKKSETEISHSKHSNRSTIAGPNKGMTACRKPGN
RECNHHCKNKQTCGHDCCKTGVAQKSETKEPTISSYLSDLRNRNAVSSLPPVKRLKMQMN
KSRSVDLKEFGFTPKPSVSSISRSECLNIPGLSVMEQRDQHDFCVKVQQEPSEYEDKEVL
NVNFELGNEVWDDFDDENLLEVTSFSASTEKTKTSGFGNTLSSSTRGSKLFLQEPKSKFQ
GEMTKSFVSSHGKPDTYLSNSPVFEFDTSSLMKLPQQAGNTTIVHSQERKQQNLSPEIEK
LCFTHSKKIPNSSHFVKKVDFFIRNNECKEEIDFSRYHPDDEADEMKSFLGIFDDIF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgactccttgttttctttggatactttgttttttgaaaaaccagat
gaagctaaaaactatccagacaatgaaaaatcattggattggtttctcccacctgttcca
ttgatttcagaaattccagatactcaggtattagaggaggaaatagaaagtcataaactg
ttaggtcaggaagaaaggccaaaaatgttaccatcaaatttaaagatgactaatgtaaac
acaaattatatttcaccaacacaaaaattccaatttgccttttcctcaaataaatgtgaa
acaggtgatctgaatttaacagaagcaggtaaccataacttaacacgtgttcctgggaag
ctgacctatggttctcagaaatacaaaaatcacattggcaccgagatagcacctgagaaa
aatgtttcaggtaatacaaaattagtaaattttgcagaagataaaggagagagcacatca
gccttccgaaaaagattatttaaaatatctgacaatatacgtgaggctgtttattctaat
gacagtacaaacttggagtcttctgttggctcagtgaaaattgtcccaacagaaatgaac
aaaggggaatcatggaaatgtagcaatagtaagcagaaacatcaatattcagacattaat
atgtttgcagcaagcaatgctgtttcagcttctgaaatcagagaagacatattcaaagga
ccaactttttcagttgcatcccaacctcatgaagttcaaggggcaacagaaaatgattta
gattctttgaaggctgtcacagaaatcccggcaaaatttagaagtattttcaaagaattc
ccatatttcaactatatacagtccaaagcctttgatgatcttctttacacagataggaat
tttgtgatttgtgctccaactggttctgggaaaactgtggcgtttgaactagctataaca
agattgttaatggaagtaccattgccatggtcaaacataaaaattgtttatatggcacca
ataaaagccctgtgtagtcagcgtttcaatgattggaaagaaaaatttgggccaatagga
ttgaattgtaaagaactcactggagatacagtaatggatgacctatttgagatccaacat
gcccatattattatgacaactccagaaaaatgggatagcatgactaggaaatggagagac
aactctttggtccagctggttagactctttctcattgatgaggtacatgttgtaaaagat
gaaaaccgtggaccaactcttgaagttgtagtcagcagaatgaaaactgtacagtcttta
tctcctccttcagaaaatagcacagttattccaatgagatttgtagctgtgtctgcaaca
attccaaatgctgaggatattgcagaatggctttcagatggtgaaagacctgcagtatgt
ttgaaaatggatgagaaacataggccagtgaaacttcagaaagtggtccttggattcccc
tgcggaagtaaccaaactgaatttaagtttgatttaaccctcaactacaaaattgctggt
gttatacaaacatactctgatcagaaacccacacttgtgttttgtgcaacaaggaaaggt
gtgcaacaggctgcttctgttctagtgaaagatgccaaatttattatggcggtggaacag
aaacagaggttacagaagtatgcatattccataagagattcaaaactgagagatatctta
atacatggtgttgcttatcatcatgctggtatggagctgtcagatagaaaagtagttgaa
ggagctttcactgttggagatctaccagttctttttaccaccagtactttagctatggga
gtaaatttaccagctcacctagtagttataaaatctacaatgcattatgctggaggaatg
tttgaagaatacagtgaaacagatattctacagatgattggtagagctggtcgacctcaa
tttgatactacagctactgcagttattatgactcggttaagtacaaaagagaagtatatt
cagatgttagcttgtagtgacactgtagaaagcagtttacacagacatcttatcgaacat
ttaaatgcagagatagtgttacataccatcacagatgtgaatattgctttggaatggata
cgatcaactttgctttatatcagagccttgaaaaatccatctcattatggttttgcatct
ggattgaacaaagatggaattgaagcaaaattacaagaattatgtttgaagaatctgcat
gatttatcatctctggacttgataaggatggatgaagatgttaatttcaaaccaactgag
gcaggaagattaatggcttggtattacattacatttgagacagtgaagaaattttctact
atcagtggaaaagagactttattagatctggtcacgatgatatccagctgcaaggaattt
gtagatgtgcagttaaggataaatgaaaagaaaatattgaatactttgaacaaagatcca
aatagagtaactatcagatttccaatggaaggaagaattaaaacaagagaaatgaaaata
aattgtcttattcaggctcaactaggatgcattcccatacaagactttgctttgacacaa
gatatctcgaagatttttagaaatggctcacgaattacaagatggttgtcagattttgtg
gctgttcaagaaaagtttgctatattattgaacagtttgattttagctaaatgttttaga
tgcaaactttgggaaaactctctacatgtatccaaacagctggaaaaaataggtataaca
ttgtcaaatgcaatggtaaatgcaggtttgacttcctttaaaaaaatagaagaaacagat
gcaagggaacttgaactgattttaaatagacaccccccctttggaacgcaaataaaagaa
acagtgatgtatctaccaaaatatgaacttgaagtggaacagattgcaagatacagtgat
accatggcagaaatattagtgacaattatattaagaaactttgaacagctacaagctaga
agaacatcaccagattctcactatgttaccttaatcataggtgatgcagataaccagctg
gtttttaagcacaaaattatggattctgttttactaaaagctggaaattggactaaaaag
attgatgtgaggagagcttttacatctgaagatcttagcataaatctaattagttctgag
tatgttggacttgatattcagcagaaatttacagtcttttacttaggacccaggaggctt
ggaaatcaaataattatgcgaaaaaaatcagaaacagagatttcccattctaaacattca
aatagatctactatagcaggacccaataaaggaatgactgcttgcagaaaacctgggaac
cgagaatgtaatcatcactgtaaaaataaacagacatgtggacatgactgctgtaaaact
ggagtggcacaaaagtcagaaacaaaagagccaacaatctcttcatatttatccgatcta
agaaacaggaatgctgtttcatcactgcctccggttaaacgtctcaagatgcaaatgaat
aaatctcgaagtgtggaccttaaagaatttggttttactccaaaaccttctgtttccagt
atatcaaggtcagagtgtttaaacatacctggattgtctgtaatggagcagagggatcag
catgatttctgtgtaaaagttcaacaagaaccatctgaatatgaagacaaagaagttttg
aatgtgaactttgaattgggaaatgaagtttgggatgattttgatgatgagaacttatta
gaagttactagtttttcagccagtactgagaagacaaaaacatcaggatttggaaacact
ttgagttcaagtaccaggggaagtaagctattcctccaagagccaaagagcaaattccaa
ggagaaatgacaaaaagttttgtttcatcacatgggaagccagatacttatttatcaaat
tctcctgtattcgagtttgatacatcctccctgatgaaattacctcaacaagctggaaat
acaactattgtccattcacaagaaagaaaacaacaaaatctgtcaccagagattgaaaag
ctatgctttactcactctaaaaaaataccaaattcttcacattttgttaagaaagtggat
ttctttattagaaacaatgaatgtaaagaggaaattgatttcagtaggtatcatcctgat
gatgaagctgatgaaatgaagtctttcctgggaatatttgatgacattttctaa
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integrated database retrieval system
