Vulpes lagopus (Arctic fox): 121488252
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Entry
121488252 CDS
T07435
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121488252 (SOX30)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121488252 (SOX30)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
121488252
NCBI-ProteinID:
XP_041606628
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All DBs
Position
3:complement(35743212..35772270)
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AA seq
774 aa
AA seq
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MERARPEPPPQPRQLPRTTPPRPLRPAPPQPPVEGASFRAAAAELPPSPPTPCAAAIATV
ASSCGEAQASGVQPAARRLLQVKPEQVLLLPPGPPLAQARDEGGVPSPAQARLLQLRPEL
LLLPPPPPPPPPASDGAPCRPDLHAAQPRALLVKAEKQEQGPGSEPSLSAGTRRPADGGP
RASRAAKLEGPGPALDGRRGDQKKGRLEAEAVARDAPQGGEGKNLAAVREGVIKTEEPEG
PREDCRPGGEPASNGLVHGSKEVILAQPSGAFGPHQQDLRIPLTLHAVPPGARIQFQGPP
PSELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKR
PMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHRE
EFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTIT
HPVGDAPPAIQLPTPAVQRPSPISLFQPSVSSTAQVAVQAPNLPLRPALPPQHFAGPSQT
DTHRLHSGASCSVKRPTPVSLENTNRIPTSASTAHARFATSTIQPPKEYPSVSTCPRSAP
IPQAPPIPHSHVYQAPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYG
NFPSSMPECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESMDGTSYYNS
HSHSGEEYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagagggccaggccggagccgccgccccagccgcgccaactgccgcggacgaccccg
ccgcgcccgctccgccctgctcctccccagccgccggtcgagggcgcctcctttcgggct
gcggccgcggagctgccgccgtcgccgcctaccccgtgcgcggccgccattgcgaccgtg
gcctcgtcgtgcggggaggcccaggcgtcgggggtacagcccgcggcacggcggctgctg
caggtgaagcccgagcaggtgctgctgctaccgccggggccaccgctggctcaggcccgg
gacgaaggcggcgtcccctcgcccgcgcaggcgcggctgctgcagctgaggcccgagctg
ctgctgctgccgccgccgccgccgccgccgccgcccgcgtccgacggcgccccctgcaga
cccgacctgcacgcggcgcagcctcgggccctgctcgtcaaggcggagaagcaggagcag
ggccccggctcggagccgtcgctgtcggcggggacgcggaggcctgcggacgggggccct
cgggcctccagggcggccaagctggaaggcccggggccagctctcgacggccgccggggg
gaccagaagaagggcaggctggaggcggaggcggtcgcgagggacgcgccgcaaggcggg
gaaggcaaaaacctggcggccgtcagagaaggggtcatcaaaacggaggagcccgagggg
ccccgcgaggactgcagaccgggcggggagcccgcgtccaatggcctggtccatggcagc
aaggaggtcatcctggcccagccgtccggcgcctttgggccccaccagcaagatctcagg
atccctctgactctccacgcggtcccccctggggcccggatccagtttcagggacctcca
ccttcagagctgatacggttgaccaaggtccccttgacgccagtgcctattaaaatgcaa
tctttactggagccttctgtaaaaattgagaccaaagatgtcccgctcaccgtgcttccc
tcagatgcaggaataccagatactcccttcagtaaggacagaaatggtcatgtgaagcga
cccatgaatgcatttatggtttgggcaaggattcaccggccagcactagccaaagctaac
ccagcagccaacaatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagt
gaagaacaaaagaaaccctattatgatgaagcacaaaagattaaagaaaagcacagagag
gagtttcctggttgggtttatcaacctcgtccagggaagcgaaaacgcttccctctaagt
gtttccaatgtattttctggtaccacacagaatatcatctctacaaatcctacaacaata
tatccttatcgctcacctacctactctgtggtaattcccagcctacagaacaccatcact
catccagttggtgatgccccacctgccatccagctgcccacacctgcagtccagcgccca
agccccatctcacttttccagcccagcgtctccagtactgcccaggtggccgtccaggct
ccaaatctgcccctccgcccagcacttccaccccagcactttgctgggccctcccaaaca
gacactcatcggctgcattctggagccagttgctctgtgaagagacccacgcctgtctct
ctggagaacaccaacaggattccaactagtgcaagtactgcccatgccagatttgcaacc
tcaaccatccaacctcctaaggagtatcccagcgtttccacttgtcccagaagtgcacca
atcccccaggctcctcctattccacactcacacgtataccaggctcctccccttggccat
ccagccacgttgtttgggacaccgcctcgattctcttttcatcacccttacttcctacct
ggaccgcactatttcccatcaagcacgtgcccttatagtcggcctccctttggctatgga
aattttccaagttcaatgccagaatgccttggttattatgaagacaggtaccaaaaacat
gaggctatgttttcagctttaaatagagactatccttttagagactacccagatgaacgt
acacacagtgaagattctcggagttgtgagagcatggatgggacctcttactataatagt
catagtcacagtggggaagaatacttaaatcccatgcctcagctggacattggagccttg
gagaatgtcttcacagccccaacatcaactccctctagcatccagcaagtcaatgtcact
gacagtgatgaagaggaagaagaaaaagtgctcagaaatttataa
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