Vulpes lagopus (Arctic fox): 121488734
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Entry
121488734 CDS
T07435
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vlg01001
]
121488734 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121488734 (TRIM24)
Enzymes [BR:
vlg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121488734 (TRIM24)
Protein kinases [BR:
vlg01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
121488734 (TRIM24)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121488734 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
121488734
NCBI-ProteinID:
XP_041606994
LinkDB
All DBs
Position
4:50025454..50119503
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AA seq
1185 aa
AA seq
DB search
MSLPPRPLGGALLAVASVAGRGRAGAGPEVGRDRGGGRRRELGEARAGWAPSTSAEAVGE
ADGAQPSRCGEAPEPAPKLPPRPRSCQRHLMLPRPCWARPRPRRASPPPARRSAALRGSP
RKVRGGQGGRAGGEEPEEPEERPPPDLLSRRRRRGCAAGEGRGGGSVSAAAAPRSPPGLE
ERAPHFGKPRPERAALCSSRLLGPLRPVTCSALCLPRSFVPGPHGPNHPVRTHVIGAGGG
GRWVRTERRGLFCGEACADPDAVFCPARRFRALTRSPISLPSARDKEPRDVGVIRCPVCS
QECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECVEWLCKTCIRAH
QRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDKLTCRDCQLLEH
KEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKFTGNQIQNRIIEVNQNQKQVEQDIKV
AIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVMHFSKWAVSSGS
STALLYSKRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNIINLGSLVIEDKESQ
PQMPKQNPVVEQNSQPPGGLSSNQLSKFPTQISLAQLRLQHMQQQQPPPRLINFQNHSPK
PNGPVLPPHPQQLRYSSNQNMPRQAIKPNPLQMAFLAQQAIKQWQISSGQAAASTANSTS
STPSSPTITSAAGYDAKAFGSPMIDLSSPVGGSYNLPSLPDIDCSSTIMLDNIVRKDTSI
DHGQPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAG
ADSTHKVPVVMLEPIRIKQENSGPPENYDFPVVIVKQESDEESRPQNTNYPRSILTSLLL
NSSQSTTSEESVLRSDAPDSTGDQPGLHQESSSNGKSDWLDASQKSPLHVGETRKEDDPN
EDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDLSKPEVEYDCDAP
SHNSEKKKTEGLVKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLTVPDYYRIIKNPMDL
STIKKRLQEDCSMYTKPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLY
PEKRFPKLEFRNESEDNKFSDDSDDDFVQPRKKRLKSIEERQLLK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcccgccgcggccattgggcggcgcgctcctcgccgtcgcctcagttgctggg
agagggagggcgggggcggggcctgaggtgggccgggaccggggcggggggcgccggaga
gaactcggggaggcgagggccggctgggcgccttcgacgagcgccgaggcggttggcgag
gcggacggggcgcagccttcccggtgcggggaagctccggagccggcgcccaagctgccg
ccccgcccgcgctcctgccagcgccacctcatgctgccccgcccgtgctgggctcggccg
agaccccgccgcgcgtccccgcccccggctcgccggtcagcggctcttcgcggttcgcca
cgcaaggtgagaggcggccaaggtgggcgcgcggggggagaggagcctgaggagcctgag
gagcggccccccccggacctgctgtcgcgtcgccgccgccgggggtgcgcggcgggggag
gggcgcggaggagggtccgtgtcggcggcggcggctccgcgttctcctccggggctggag
gagcgcgccccgcactttggaaaacctcggccggagcgggctgcgctgtgtagctcgcgg
ctgcttggcccgctgcgtccggttacctgctccgccctctgcctcccccggagcttcgtc
ccgggtccgcacggcccgaatcacccggttcggacccacgttattggagccgggggtggt
gggcggtgggtgaggacggagcgacggggactcttctgcggggaggcgtgtgcagatccg
gatgctgttttctgtcctgcacggaggtttcgggctctaacgcgttccccgatttctctc
ccttctgctcgggacaaagaaccaagagacgttggagttattcgatgtccagtttgcagc
caagaatgtgcagagagacacatcatagataacttttttgtgaaggacactactgaggtt
cccagcagtacagtagaaaagtctaatcaggtatgcacaagctgtgaggacaatgcagaa
gcaaatgggttttgtgtagaatgtgttgagtggctctgcaagacatgcatcagagctcat
caaagagtgaagttcacaaaagaccacactgtaagacagaaggaggaagtatctccagag
gcagtgggtgtgaccagtcagcgaccagtgttttgtccttttcataagaaggaacagcta
aagctttactgtgaaacatgtgacaaactgacatgccgggactgccagttattagagcat
aaagagcataggtaccaatttatagaagaagcttttcagaatcagaaagtgatcatagat
acactaattaccaaactgatggaaaaaacaaaatacataaaattcacaggaaatcagatc
caaaacaggataattgaagtaaatcaaaatcaaaagcaggtggaacaggatattaaagtt
gctatatttacattgatggtagaaataaataaaaaaggaaaagctctactacatcagctt
gagagtcttgcaaaggatcatcgcatgaaacttatgcaacaacaacaggaagtagctgga
ctttctaaacaattggaacatgttatgcatttttctaaatgggcagtttccagtggcagc
agtacagcattactttatagcaagcgactgattacataccgattaaggcacctccttcga
gcaaggtgtgatgcttccccagtgaccaacaataccatccagtttcactgtgatcctagt
ttctgggctcagaatattatcaatttaggttctttagtaattgaagataaagagagtcag
ccacaaatgcctaagcagaatcctgtcgtggaacagaattcacagccaccaggtggttta
tcttcaaaccagttatccaagtttccaacacagatcagcctagctcaattacgactccag
catatgcagcaacagcaaccccctccacgtttgataaattttcaaaatcacagccccaaa
cccaatggaccagttcttcctccacatcctcaacagctgagatattcatcaaaccagaac
atgccacgacaagcaataaagcccaacccactacagatggcttttttggctcaacaagct
ataaaacagtggcagatcagcagtgggcaggctgccgcatcaactgccaacagcacatcc
tctactccttctagtcctaccattactagtgcagcaggatatgatgcaaaggcttttggt
tcacctatgattgacttgagctcaccagtgggaggttcttataaccttccttctcttcca
gatattgactgttcaagtactattatgctggacaatattgtgaggaaagatactagtata
gatcatggccagccaagaccaccctcaaacagaaccgtccagtcaccaaattcatcagtg
ccatctccaggccttgcaggacctgttaccatgactagtgtacacccaccaatacgttca
cctagtgcctccagcgttgggagccgaggaagttctggctcttcaagcaagccagcagga
gctgattctacacataaagtcccagtagtcatgttggagccaatccgaataaaacaggaa
aacagtggaccacctgaaaattatgattttcctgttgttatagtgaagcaagaatcagat
gaagaatctaggccccaaaataccaactatccaagaagcatactcacttccctactctta
aatagcagtcagagcactacctcagaggagtctgtgctcaggtcagatgcccctgatagt
acaggagatcaacctggacttcaccaggaaagttcctcaaacgggaagtctgactggcta
gatgcctcccagaagtcaccccttcatgttggagagaccaggaaagaggatgaccccaac
gaggactggtgtgcagtttgtcagaatggaggggaactcctgtgctgtgagaagtgtccc
aaagtatttcatctttcttgtcatgtgcccactttggcaaattttccaagtggagagtgg
atttgcactttctgccgagacttatctaaaccagaagttgaatatgattgtgatgctccc
agtcacaactcagaaaaaaagaaaactgaaggccttgttaaattaacaccaatagataaa
aggaagtgtgaacgcctacttttatttctttactgccatgaaatgagcctggcttttcaa
gatccagttcctctaactgtgcctgattattacagaataattaaaaatccgatggacttg
tcaaccatcaagaagagactgcaagaagattgttccatgtacacaaaacctgaagatttt
gtagctgattttagattgatctttcaaaactgtgctgaattcaatgagcctgattcagaa
gtagccaatgctggtataaaacttgaaagctattttgaagaacttctaaagaacctttat
ccagaaaaaaggtttcctaaactagaattcagaaatgaatcagaagataataaatttagt
gatgactcagatgatgactttgtacagccccggaagaaacgcctcaagagcatagaggaa
cgccagttgcttaaataa
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