Vulpes lagopus (Arctic fox): 121488899
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Entry
121488899 CDS
T07435
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04340
Hedgehog signaling pathway
vlg04360
Axon guidance
vlg05200
Pathways in cancer
vlg05205
Proteoglycans in cancer
vlg05217
Basal cell carcinoma
vlg05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121488899 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
121488899 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121488899 (SHH)
05205 Proteoglycans in cancer
121488899 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
121488899 (SHH)
05217 Basal cell carcinoma
121488899 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vlg01002
]
121488899 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vlg00536
]
121488899 (SHH)
Peptidases and inhibitors [BR:
vlg01002
]
Cysteine peptidases
Family C46: hedgehog family
121488899 (SHH)
Glycosaminoglycan binding proteins [BR:
vlg00536
]
Heparan sulfate / Heparin
Morphogens
121488899 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hint
HH_signal
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
121488899
NCBI-ProteinID:
XP_041607105
LinkDB
All DBs
Position
4:40800688..40813044
Genome browser
AA seq
541 aa
AA seq
DB search
MSPERAAGWWGGAGRRPSSFPGSKSRGGPGGEGQGQGPGQGRGRGAAGPPPGPRGLAARD
PLARWPRAQSHRGDPVPGARVSAPRASRPSASPSLHCGRRRVPQAWQDRPRWNFGSSSGT
LELLVNINSERGKRRQTRSARRRGCQARARRPGARGAGGGRGRAWGRSGDSPGPRRVDPR
RCKDKLNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGM
LARLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRP
GDRVLAADDQGRLLYSDFLTFLDRDDGAKKVFYVIETREPRERLLLTAAHLLFVAPLNDS
AAGEPEAPSGAGPPPGGAPGRRALFASRVRPGQRVYVVAERGGGRRLLPAAVHSVTLREE
ATGAYAPLTAQGTILINRVLASCYAVIEEHGWAHRAFAPFRLAHALLAALAPARTDRGGG
GDGGGGGRLPPAAPGALEAPGAADAPGAAGIHWYSQLLYQIGTWLLDSEALHPLGMAVPA
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgaaagggcggctggctggtggggtggtgccggaaggcgcccttcctccttc
cctgggtccaagagtcggggaggaccgggcggcgaggggcaggggcaggggccggggcag
ggccggggcaggggtgcagcggggccgcctcctggcccccggggactagctgctcgggac
cccttggcccgctggccgcgcgctcaaagccaccgcggagatcccgtcccaggtgcgcgt
gtctctgcgccccgggccagccgtccctccgcgtccccgtctctgcactgtggccgccgc
cgagtccctcaagcatggcaagaccgtccccggtggaactttgggagcagttctggaacg
cttgagctcctggttaatattaactcggagagggggaagcgcagacagacacgctcggcc
cgcaggcgcgggtgccaggcgcgggcgcggcggccgggggctcggggggcaggaggcggc
cggggcagggcctggggccgcagcggggacagcccgggaccacgccgagtagatccccga
aggtgcaaggacaagctgaacgccttggccatctcggtgatgaaccagtggcccggcgtg
aagctgcgggtgacggagggctgggacgaggacggtcaccactcagaggagtcgctgcac
tatgagggccgcgcggtggacatcaccacgtcagaccgcgaccgaagcaagtacggcatg
ttggcccgcctggccgtggaggctggcttcgactgggtgtactacgagtccaaggcgcac
atccactgctctgtgaaagcagagaattccgtggcggccaagtccggcggctgcttccca
ggctcggccacggtgcatctggagcagggcggcaccaagctcgtcaaagatctgcgtcct
ggggaccgcgtgctggcggccgacgaccagggccggctgctctacagcgacttcctcacc
ttcctggaccgcgacgacggtgccaagaaggtcttctacgtgatcgagacgcgggagccg
cgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtcgcgccgctcaacgactcg
gcggccggggagccggaggcgccgtcgggagccgggccgccgccggggggcgcgccgggg
cgccgcgcgctcttcgccagccgcgtgcgcccgggccagcgcgtgtacgtggtggccgag
cgcggcgggggtcgccggctgctgccggccgcggtgcacagcgtgacgctgcgcgaggag
gccacgggcgcctacgcgccgctcacggcgcagggcaccatcctcatcaaccgggtgctg
gcgtcgtgctacgcggtcatcgaggagcacggctgggcgcaccgcgccttcgcgcccttc
cgcctggcgcacgcgctcctggccgcgctggcgcccgcgcgcacggaccgcggcgggggg
ggcgacggcgggggcggcggccgcctgccccccgccgcgccaggtgcgctggaggcgccg
ggggcggccgacgcgcccggggccgcgggcatccactggtactcgcagctgctctaccaa
ataggcacctggctgttggacagcgaggccctgcacccgctgggcatggcggtcccggcc
agctga
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integrated database retrieval system
