Vulpes lagopus (Arctic fox): 121489001
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Entry
121489001 CDS
T07435
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03030
DNA replication
vlg03410
Base excision repair
vlg03420
Nucleotide excision repair
vlg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121489001 (RFC1)
03410 Base excision repair
121489001 (RFC1)
03420 Nucleotide excision repair
121489001 (RFC1)
03430 Mismatch repair
121489001 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vlg03032
]
121489001 (RFC1)
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121489001 (RFC1)
DNA replication proteins [BR:
vlg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121489001 (RFC1)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121489001 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
Rad17
RuvB_N
AAA_30
AAA_17
AAA_33
AAA_14
AAA_18
AAA_5
AAA_16
nSTAND3
AAA_19
Zeta_toxin
RNA_helicase
AAA_7
NTPase_1
SKI
NPHP3_N
TIP49
AAA_28
Motif
Other DBs
NCBI-GeneID:
121489001
NCBI-ProteinID:
XP_041607328
LinkDB
All DBs
Position
4:133404156..133480175
Genome browser
AA seq
1166 aa
AA seq
DB search
MLLHTWNYLIMKKLKDIRKFFGVIPSGKKPVTETVKKNEKTKSAEETLKSKKGIKEIKVN
SSCKEDDSKQKQPNKKKRIIYDSDSESEETVQIKNAKKQPEKLPLASKPGKILRQDPVTY
ISETDEEDDFMCKKAASKSKENGGSTHSYLGTSNMKKNEENTKTKNKPLSPIKLTPTSVL
DYFGTGSVQRSDKKMVASKRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFA
RTLAMLDEEPKTKKAWKDPEERETFSSVRANLSKAGKHKSPHKVKTEQFSDGRKNCSPNK
QTKCESLIGSQQHLKSSPHKIETSPKASSKLALLKKKGESSYKETEPMTSKRKNAVELKG
QTKTPKKPKSSPAKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEG
LTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNI
IDEDGLLNLIRTMPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESESKR
SRLTPKKDSSIKSVKKETSMLWRCLNFEEQVAEETNDDSRARNLAGDSSENKVENLLWVD
KYKPTSLKTIIGQQGDQSCANKLLRWLQNWHRGPSEDKKRAAKFGKFAGKDDGSSFKAAL
LSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEVVAESLNNTSITGFYSTSQH
GSDGAAHSVGSKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRS
LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWC
ARSKALTYDEAKADSHRAKKDIRLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAP
LFVQENYLHVKPVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYAS
VLPGELMRGYMTQFPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTINMDYLSHI
RDALVQPLTSQGVEGVQDVIALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAF
TRTYNKEVHLTPYSLQAVKTPRHSTGPALDSEYSEELIEDDSQSDEKDQDSMETDGMIKK
KTKSSKPSKSEKDKESRKGKGKSSKK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgcacacctggaactatctcattatgaagaaattgaaggatattcggaaattc
tttggggttataccaagtggaaagaaacctgtaactgaaacagtaaagaagaatgagaaa
acaaagtctgctgaagaaactttaaaatcaaagaaaggaataaaggaaattaaggtaaat
agttcttgtaaagaagatgactctaaacagaagcaaccaaacaagaaaaagaggatcatc
tatgattcagattcagaatcagaggagacagtgcagattaaaaatgccaaaaagcaacca
gaaaaattgccattggcctctaaacctggtaaaattctacgccaggatcccgttacatat
atttcagaaacagatgaagaagatgactttatgtgtaagaaggcagcttctaaatcaaaa
gagaatggaggatctacacatagttatcttgggacatcaaacatgaaaaagaatgaagaa
aacactaagaccaagaataaacctttatcaccaataaaacttacccccacgtcagtgctt
gattattttggaactgggagtgtccaaagatcagataagaagatggtagcaagcaaaaga
aaagagccttcacaaaatgcagatgactccagattaaatgatgaagccattgccaagcaa
ttgcaacttgatgaggatgcagagttggagagacaactgcatgaagatgaagagtttgcc
agaacattagctatgttggatgaagagcccaagaccaaaaaggcttggaaggacccagag
gagcgagaaacgttttcatctgtccgagccaatttaagtaaagcaggaaaacataaatct
cctcataaagtaaaaacagaacaattttcagatggcaggaagaactgtagtcctaacaag
caaactaaatgtgaaagtttgataggatctcagcaacatttgaagtcatcacctcacaaa
atagaaacttctccaaaagccagttccaagttggcccttttgaaaaaaaaaggagagagt
tcttataaagaaacagagcctatgacttcaaaaagaaaaaatgctgttgaattaaaagga
cagacaaagactcctaagaaacccaaaagttctccagctaaaaaagagtctgtaagtcct
gaagattctgagaagagacgcacaaattatcaagcttatcgaagctacttaaatcgagaa
ggccccaaagccctgggctccaaagaaataccaaagggagctgaaaattgcttggaaggc
cttacatttgtaatcacaggagtgctggagtccatcgaacgagatgaggccaagtctcta
attgagcgttatgggggaaaagtaacaggaaatgtcagcaagaaaacaaactaccttgtt
atgggtcgtgatagtggacagtccaagagtgataaggcagcagccttggggacaaatatt
attgatgaagatggcctattaaatctgattcgaaccatgccaggcaagaagtctaagtac
gaaatagcagttgaagctgagatgaagaaagaaaaatccaaattggaaagaacacctcaa
aaaaaagaccaaggaaaaagaaaaattagcccaactaagaaggaatcagaatctaaaaga
agtagacttactcccaagaaggacagctctataaagtcagtaaaaaaggaaacaagtatg
ctttggagatgcctgaattttgaggagcaggtggctgaggagacaaatgacgacagccgg
gctaggaatttggccggtgacagcagtgaaaacaaagtggaaaatttgctctgggtggat
aaatataagccaacttctctcaagaccataattggacagcaaggtgaccagagctgtgcc
aacaagctcctacgctggctccaaaattggcacaggggtccctctgaagacaagaaacgc
gcagcaaagtttggtaagtttgctggcaaagatgatggctctagttttaaagcagcgctg
ctctcaggccctccaggtgttggcaagaccaccacagcttctttggtttgtcaggaattg
ggatatagctacgtggaactgaatgcgagtgacactcggagtaagaatagtttgaaggag
gttgttgctgaatcactgaataataccagcatcacaggcttttattcaacttctcaacat
gggtcagatggagcagcccattcagtaggctcgaaacatgctcttatcatggatgaagta
gatggcatggcaggcaatgaagacaggggaggaattcaggaattaattggcctgataaaa
catacaaaaattcccattatttgcatgtgcaatgatagaaatcatcctaagattcgttct
ttggttcattattgttttgatcttcgttttcaaagacctcgagttgaacagattaagggt
gctatgatgtctattgcatttaaagagggtttgaagatcccgcctccggctatgaatgaa
ataattttgggagccaatcaagatatcagacaggttttacacaatctgagtatgtggtgt
gcacgcagtaaggcactaacctatgacgaggccaaggctgattctcatagagccaaaaag
gatatcagactgggcccgtttgatgttgcccggaaagtgtttgcagctggagaggagacc
gctcacatgtcacttgtggataagtcagatctcttttttcatgattattcaatagcaccc
ctcttcgtccaggagaactacttacatgtgaaacctgtagctgcagggggcgacatgaaa
aagcacttgatgcttttaagcagagcagcagatagcatatgtgatggtgacctagtggac
cgtcagatccggagtaagcaaaactggagtcttctgcctacacaggccatttatgccagt
gttcttcctggagagctaatgagggggtacatgacccagtttcctactttcccaagctgg
ttagggaagcactcatctactggcaaacacgatcgtattgtacaggatctagcactgcac
atgagtctcagaacttattccagcaaaaggactataaacatggattatctgtcacatata
agggatgcacttgtacagcccttgacctcacaaggggtagaaggagtacaggatgttatt
gctcttatggatgcctactacttgatgaaagaagacttcgagaatatcatggaaattagc
agctggggagggaaacctagtcccttctccaagctggatcccaaggtgaaagcagccttc
acaagaacctacaataaggaagtccaccttactccatattcacttcaagcagtaaagaca
cccagacacagcacaggcccggcactggattccgaatacagtgaagagttaattgaagat
gactctcaatctgatgagaaagaccaagactctatggaaactgatggaatgatcaagaag
aagacaaaatcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaaggaaaa
ggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
