Vulpes lagopus (Arctic fox): 121489322
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Entry
121489322 CDS
T07435
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121489322 (CHD1)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121489322 (CHD1)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
121489322 (CHD1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
121489322 (CHD1)
SLIK complex
121489322 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
121489322
NCBI-ProteinID:
XP_041608142
LinkDB
All DBs
Position
4:71110711..71183953
Genome browser
AA seq
1795 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQHPASSNSGSEED
SSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEEERDKSSCDETESDYEP
KNKVKSRKPQNRSKAKNGKKILGQKKRQIDSSEEEDDEDYDNDKRSSRRQATVNVSYKED
EEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDPNA
GFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKN
ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWED
GALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELRDYQ
LNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW
QREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGG
LNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
SSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQY
YKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIR
SSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK
QVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEEL
SAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFS
NMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGS
EGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPL
ERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFRIS
GVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGI
YEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEAQRL
SGAGGSKRRKARAKKNKAMKSIKVKEEMKSDSSPLPSEKSDEDDDKDEITSVKHPNKKIK
TERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENKV
KEAIQKEKDIKEEKLNESKSESKERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFS
ICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWR
KNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNAQVIRNPDVERLKENTN
HDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQES
RYYSDREKHRKLDDHRSRDHRSNLEGSIKDRSHSDHRSHSDHRLHSDHRASSEYTHHKSS
RDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctcgggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatctgaatccggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccccagtattctggctgttcagaggtcagca
atgctcaagaagcagcagcagcagcatccagcttcatccaatagtggatcagaggaggat
tcctccagcagtgaagattctgatgactcatcgaatgaggtcaaaaggaaaaagcataaa
gatgaagattggcaaatgtctgggtcaggatctccatctcagtctggttcagattcagaa
tctgaagaagaagaaagagataaaagcagttgtgatgaaacagaatctgattatgagcca
aaaaacaaagttaaaagcagaaaacctcaaaatagatctaaggcaaaaaatgggaagaaa
attcttggacaaaaaaagagacagattgattcatctgaggaggaagatgatgaagattat
gataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagctataaagaagat
gaagaaatgaaaacagattctgatgatctgttggaagtctgtggagaggatgttcctcaa
cctgaggaagaggaatttgaaacaatagaacgttttatggattgtcggattgggagaaaa
ggagctactggtgctactacaaccatctatgcagttgaagcagatggtgacccaaatgca
ggatttgagaaaaacaaggaaccaggagagatccagtatttaattaaatggaaaggatgg
tcccatatccacaatacttgggaaacagaagaaacccttaagcagcagaatgttagagga
atgaaaaaattggataattataagaaaaaagatcaggaaacaaaaagatggttgaaaaat
gcttctccagaagatgtggaatattacaattgccagcaagaacttacagatgatctacat
aaacagtatcaaatagtggaacgaataattgctcattccaatcagaagtcagcagctggt
tatcctgattattattgcaaatggcagggccttccatactcagaatgcagctgggaggat
ggagctctaatttccaaaaagtttcaagcctgcatagatgagtattttagcaggaatcaa
tcaaaaaccactccttttaaagattgcaaagtattaaaacagaggccaagatttgtagcc
ctaaagaagcagccgtcctatattggaggacatgaaagtttagaattaagagattatcaa
ctgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgtatacttgct
gatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactatttgtttcac
gaacatcaattatatggaccttttctgttagtagtaccactctccacccttacttcctgg
caaagagaaattcagacatgggcttctcaaatgaatgctgtggtttatttaggtgacatt
aacagcagaaatatgatacgaactcatgaatggatgcatccccagaccaaacggttaaaa
tttaatatacttttaacaacttatgaaattttactgaaggataaggcattccttggaggt
ctaaactgggcgtttataggtgtagatgaagcacatcgattgaagaatgatgactccctt
ctgtataaaactttaatagactttaagtccaatcaccgtctccttattactggaactcct
ctacaaaactccctcaaagagctctggtctttgctacatttcattatgccagaaaagttt
tcttcctgggaagattttgaagaagaacatgggaaaggcagagaatatggttatgcaagc
ctccacaaggagcttgagccgtttctgttacgcagagttaaaaaagatgtggaaaaatct
cttcctgccaaagttgagcagattttaagaatggaaatgagtgctttacagaaacagtat
tacaaatggatattaactaggaattataaagccctcagcaaaggttccaagggcagtacc
tcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgctacctcatt
aaaccaccagataataatgaattctataataaacaggaggccttacaacacttaatccgt
agtagcggaaaattgattcttcttgacaaactgttaattcgcctaagagaacgaggcaat
agagttcttattttttcccaaatggtgcggatgttagatatacttgcagaatatttgaaa
taccgtcaattcccctttcaaagattagatggatcaataaagggggagctgagaaaacaa
gctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttccacaaga
gctggaggcctaggaattaatttagcctctgctgacactgttgttatatttgattctgat
tggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcagaagaaa
caggtgaatatttatcgtctggttacaaagggatcagttgaagaggatatacttgaaagg
gccaaaaagaagatggttttagatcatcttgtgattcagagaatggacacgacggggaag
acagtactacatacaggttctgctccctcaagttccactcctttcaataaagaggaatta
tcagccattttaaagtttggtgctgaagaactttttaaggaacctgaaggagaagaacaa
gagccccaggaaatggatatagatgaaatcttgaagagagctgaaactcatgaaaatgaa
ccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgccaacttttca
aatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaattgggaggaa
ataattccagaagatcaaagaagacgattagaagaggaagaaaggcaaaaggaacttgaa
gaaatttatatgctcccgagaatgagaaactgtgcaaaacagattagttttaatggaagt
gaagggaggcgcagtagaagtaggagatattctggatctgatagtgactcaatctcagaa
aggaaaaggccaaagaaacgtggaagaccacggactattcctcgagagaatatcaaagga
tttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggtggccctctg
gaaagattagatgcaattgctcgggatgctgaattagttgataagtcagaaacagacctc
agacgactaggagaattggtgcataatggttgcattaaagctttaaaggataattcttca
ggaacagagcgaacaggtggtagacttggaaaagtaaagggtccaacgttccgaatatct
ggagtacaagtgaatgccaagctcgtcatctcccatgaagaagaattaataccattgcac
aaatccattccttcagatccagaagaaagaaagcagtatactatcccatgccacacaaag
gcagctcattttgatatagactggggcaaagaagatgattccaatttgttaattggtatc
tacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctcagtttaaca
cacaagattcttccagatgatcctgataaaaaaccacaagcaaagcagttgcagacacgt
gcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaagctcagagactt
tctggtgcaggagggtcaaagaggagaaaagcaagagctaagaagaataaagcaatgaag
tctataaaagtgaaagaagaaatgaagagtgattcttcacccctgccttcagagaagtcc
gatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaaaaaattaaa
acagaaagagacagtgaagaaagacctgagccagatgtttttataaagaaggaatcagaa
gaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagggagataaaagaa
aaagaggataagaaagatataaaagaaaaagattttaaagagaaaagagaaaacaaagta
aaagaagctatacagaaagaaaaagacataaaggaagaaaagttgaacgaatccaagtct
gagagcaaggaaagatccaagaaatcttcagtgtcagatgctccagttcatatcactgca
agtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaagacattcagc
atttgtaaggaaagaatgaggcctgtcaaagcagctttgaaacaacttgataggcctgaa
aaaggcctttcagaaagagaacaactggagcatactagacagtgtttaataaaaattgga
gaccatatcacagaatgtctaaaagagtatacaaatcctgaacaaatcaagcagtggaga
aaaaacctgtggatttttgtatctaagtttacagagtttgatgcaagaaaattacataaa
ttatataaacatgctattaaaaaacggcaggaatctcagcaaaataatgaccagaacagc
aacttgaatgctcaagtgattagaaatccagatgtggaaagattaaaagagaatacaaat
cacgatgatagtagcagggacagttattcatctgatagacacttatctcagtatcatgat
catcataaagaccggcatcagggagattcttacaaaaagagtgactctaggaaaagaccc
tattcttcttttagtaatggtaaagatcatcgtgactgggatcattacaagcaagaaagc
aggtattacagtgatagagagaaacacagaaaactggacgatcacaggagtagagatcac
aggtcaaatttggaaggaagtataaaggatagatctcattctgatcatcgttctcattca
gatcatcggttacattcagaccatcgggcaagttctgagtatacacaccataaatcttcc
agggattataggtatcactcagattggcaaatggaccacagagcttccagtagtggcccc
agatcaccactagatcagagatctccttatggctccagatctccatttgaacattcaatt
gaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
